abbreviation officialName equation geneAssociation ecocyc-rxn-ids analysis notes 12DGR120tipp "1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C12:0)" 12dgr120[p] --> 12dgr120[c] 12DGR140tipp "1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C14:0)" 12dgr140[p] --> 12dgr140[c] 12DGR141tipp "1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C14:1)" 12dgr141[p] --> 12dgr141[c] 12DGR160tipp "1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C16:0)" 12dgr160[p] --> 12dgr160[c] 12DGR161tipp "1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C16:1)" 12dgr161[p] --> 12dgr161[c] 12DGR180tipp "1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C18:0)" 12dgr180[p] --> 12dgr180[c] 12DGR181tipp "1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C18:1)" 12dgr181[p] --> 12dgr181[c] 12PPDRtex "(R)-Propane-1,2-diol transport via diffusion (extracellular to periplasm)" 12ppd-R[e] <==> 12ppd-R[p] (B0241 OR B0929 OR B1377 OR B2215) (:UNMAPPED-CPDS) 12PPDRtpp "(R)-Propane-1,2-diol facilitated transport (periplasm)" 12ppd-R[p] <==> 12ppd-R[c] (:UNMAPPED-CPDS) 12PPDStex "(S)-Propane-1,2-diol transport via diffusion (extracellular to periplasm)" 12ppd-S[e] <==> 12ppd-S[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 12PPDStpp "(S)-Propane-1,2-diol facilitated transport (periplasm)" 12ppd-S[p] <==> 12ppd-S[c] 14GLUCANabcpp "1,4-alpha-D-glucan transport via ABC system (periplasm)" 14glucan[p] + atp[c] + h2o[c] --> 14glucan[c] + adp[c] + h[c] + pi[c] (B4034 AND B4033 AND B4032 AND B4035) 14GLUCANtexi "1,4-alpha-D-glucan transport via diffusion (extracellular to periplasm) irreversible" 14glucan[e] --> 14glucan[p] B4036 (RXN0-1683) 23CAMPtex 23cAMP transport via diffusion (extracellular to periplasm) 23camp[e] <==> 23camp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 23CCMPtex 23cCMP transport via diffusion (extracellular to periplasm) 23ccmp[e] <==> 23ccmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 23CGMPtex 23cGMP transport via diffusion (extracellular to periplasm) 23cgmp[e] <==> 23cgmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 23CUMPtex 23cUMP transport via diffusion (extracellular to periplasm) 23cump[e] <==> 23cump[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 23DAPPAt2pp "2,3-diaminopropionate transport in via proton symport" 23dappa[p] + h[p] --> 23dappa[c] + h[c] 23DAPPAtex "2,3-diaminopropionate transport via diffusion" 23dappa[e] <==> 23dappa[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 23PDE2pp "2',3'-cyclic-nucleotide phosphodiesterase (UMP) (periplasm)" [p] : 23cump + h2o --> 3ump + h B4213 23PDE4pp "2',3'-cyclic-nucleotide phosphodiesterase (CMP) (periplasm)" [p] : 23ccmp + h2o --> 3cmp + h B4213 23PDE7pp "2',3'-cyclic-nucleotide phosphodiesterase (AMP) (periplasm)" [p] : 23camp + h2o --> 3amp + h B4213 23PDE9pp "2',3'-cyclic-nucleotide phosphodiesterase (GMP) (periplasm)" [p] : 23cgmp + h2o --> 3gmp + h B4213 26DAHtex "meso-2,6-Diaminoheptanedioate transport via diffusion (extracellular to periplasm)" 26dap-M[e] <==> 26dap-M[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 2AGPA120tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C12:0) transporter via facilitated diffusion (periplasm) 2ddecg3p[p] --> 2ddecg3p[c] B2835 (:UNMAPPED-CPDS) 2AGPA140tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C14:0) transporter via facilitated diffusion (periplasm) 2tdecg3p[p] --> 2tdecg3p[c] B2835 (:UNMAPPED-CPDS) 2AGPA141tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C14:1) transporter via facilitated diffusion (periplasm) 2tdec7eg3p[p] --> 2tdec7eg3p[c] B2835 (:UNMAPPED-CPDS) 2AGPA160tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C16:0) transporter via facilitated diffusion (periplasm) 2hdecg3p[p] --> 2hdecg3p[c] B2835 (:UNMAPPED-CPDS) 2AGPA161tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C16:1) transporter via facilitated diffusion (periplasm) 2hdec9eg3p[p] --> 2hdec9eg3p[c] B2835 (:UNMAPPED-CPDS) 2AGPA180tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C18:0) transporter via facilitated diffusion (periplasm) 2odecg3p[p] --> 2odecg3p[c] B2835 (:UNMAPPED-CPDS) 2AGPA181tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C18:1) transporter via facilitated diffusion (periplasm) 2odec11eg3p[p] --> 2odec11eg3p[c] B2835 (:UNMAPPED-CPDS) 2AGPE120tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C12:0) transporter via facilitated diffusion (periplasm) 2agpe120[p] --> 2agpe120[c] B2835 2AGPE140tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:0) transporter via facilitated diffusion (periplasm) 2agpe140[p] --> 2agpe140[c] B2835 2AGPE141tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1) transporter via facilitated diffusion (periplasm) 2agpe141[p] --> 2agpe141[c] B2835 2AGPE160tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:0) transporter via facilitated diffusion (periplasm) 2agpe160[p] --> 2agpe160[c] B2835 2AGPE161tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:1) transporter via facilitated diffusion (periplasm) 2agpe161[p] --> 2agpe161[c] B2835 2AGPE180tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:0) transporter via facilitated diffusion (periplasm) 2agpe180[p] --> 2agpe180[c] B2835 2AGPE181tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:1) transporter via facilitated diffusion (periplasm) 2agpe181[p] --> 2agpe181[c] B2835 2AGPEAT120 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C12:0) [c] : 2agpe120 + atp + ddca --> amp + pe120 + ppi B2836 2AGPEAT140 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:0) [c] : 2agpe140 + atp + ttdca --> amp + pe140 + ppi B2836 2AGPEAT141 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:1) [c] : 2agpe141 + atp + ttdcea --> amp + pe141 + ppi B2836 (:UNMAPPED-CPDS) 2AGPEAT160 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C16:0) [c] : 2agpe160 + atp + hdca --> amp + pe160 + ppi B2836 2AGPEAT161 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C16:1) [c] : 2agpe161 + atp + hdcea --> amp + pe161 + ppi B2836 2AGPEAT180 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:0) [c] : 2agpe180 + atp + ocdca --> amp + pe180 + ppi B2836 2AGPEAT181 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:1) [c] : 2agpe181 + atp + ocdcea --> amp + pe181 + ppi B2836 2AGPG120tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C12:0) transporter via facilitated diffusion (periplasm) 2agpg120[p] --> 2agpg120[c] B2835 (:UNMAPPED-CPDS) 2AGPG140tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:0) transporter via facilitated diffusion (periplasm) 2agpg140[p] --> 2agpg140[c] B2835 (:UNMAPPED-CPDS) 2AGPG141tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:1) transporter via facilitated diffusion (periplasm) 2agpg141[p] --> 2agpg141[c] B2835 (:UNMAPPED-CPDS) 2AGPG160tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:0) transporter via facilitated diffusion (periplasm) 2agpg160[p] --> 2agpg160[c] B2835 2AGPG161tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:1) transporter via facilitated diffusion (periplasm) 2agpg161[p] --> 2agpg161[c] B2835 2AGPG180tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0) transporter via facilitated diffusion (periplasm) 2agpg180[p] --> 2agpg180[c] B2835 (:UNMAPPED-CPDS) 2AGPG181tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1) transporter via facilitated diffusion (periplasm) 2agpg181[p] --> 2agpg181[c] B2835 (:UNMAPPED-CPDS) 2AGPGAT120 2-acyl-glycerophospho-glycerol acyltransferase (n-C12:0) [c] : 2agpg120 + atp + ddca --> amp + pg120 + ppi B2836 (:UNMAPPED-CPDS) 2AGPGAT140 2-acyl-glycerophospho-glycerol acyltransferase (n-C14:0) [c] : 2agpg140 + atp + ttdca --> amp + pg140 + ppi B2836 (:UNMAPPED-CPDS) 2AGPGAT141 2-acyl-glycerophospho-glycerol acyltransferase (n-C14:1) [c] : 2agpg141 + atp + ttdcea --> amp + pg141 + ppi B2836 (:UNMAPPED-CPDS) 2AGPGAT160 2-acyl-glycerophospho-glycerol acyltransferase (n-C16:0) [c] : 2agpg160 + atp + hdca --> amp + pg160 + ppi B2836 2AGPGAT161 2-acyl-glycerophospho-glycerol acyltransferase (n-C16:1) [c] : 2agpg161 + atp + hdcea --> amp + pg161 + ppi B2836 2AGPGAT180 2-acyl-glycerophospho-glycerol acyltransferase (n-C18:0) [c] : 2agpg180 + atp + ocdca --> amp + pg180 + ppi B2836 (:UNMAPPED-CPDS) 2AGPGAT181 2-acyl-glycerophospho-glycerol acyltransferase (n-C18:1) [c] : 2agpg181 + atp + ocdcea --> amp + pg181 + ppi B2836 (:UNMAPPED-CPDS) 2DGLCNRx 2-dehydro-D-gluconate reductase (NADH) [c] : 2dhglcn + h + nadh --> glcn + nad B3553 2DGLCNRy 2-dehydro-D-gluconate reductase (NADPH) [c] : 2dhglcn + h + nadph --> glcn + nadp B3553 (1.1.1.215-RXN) ((LEFT REMOVE PROTON)) 2DGULRx 2-dehydro-L-gulonate reductase (NADH) [c] : 2dhguln + h + nadh --> idon-L + nad B3553 2DGULRy 2-dehydro-L-gulonate reductase (NADPH) [c] : 2dhguln + h + nadph --> idon-L + nadp B3553 (YIAE2-RXN) ((LEFT REMOVE PROTON)) 2MAHMP 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphatase [c] : 2mahmp + h2o --> 4ampm + h + pi (B0446 OR B1134) 34dhpactex dihydroxyphenylacetaldehyde transport via diffusion (extracellular to periplasm) 34dhpac[e] <==> 34dhpac[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 3AMPtex 3AMP transport via diffusion (extracellular to periplasm) 3amp[e] <==> 3amp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 3CMPtex 3CMP transport via diffusion (extracellular to periplasm) 3cmp[e] <==> 3cmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 3GMPtex 3GMP transport via diffusion (extracellular to periplasm) 3gmp[e] <==> 3gmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 3HAD100 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C10:0) [c] : 3hdecACP --> h2o + tdec2eACP (B0954 OR B0180) (FABAUNSATDEHYDR-RXN) 3HAD120 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C12:0) [c] : 3hddecACP --> h2o + tddec2eACP (B0954 OR B0180) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD121 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C12:1) [c] : 3hcddec5eACP --> h2o + t3c5ddeceACP (B0180 OR B0954) (RXN0-2144) 3HAD140 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:0) [c] : 3hmrsACP --> h2o + tmrs2eACP (B0954 OR B0180) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN) (:EXPANDED-RXN-MATCH) 3HAD141 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:1) [c] : 3hcmrs7eACP --> h2o + t3c7mrseACP (B0954 OR B0180) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD160 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:0) [c] : 3hpalmACP --> h2o + tpalm2eACP (B0954 OR B0180) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD161 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:1) [c] : 3hcpalm9eACP --> h2o + t3c9palmeACP (B0180 OR B0954) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD180 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C18:0) [c] : 3hoctaACP --> h2o + toctd2eACP (B0954 OR B0180) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD181 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C18:1) [c] : 3hcvac11eACP --> h2o + t3c11vaceACP (B0954 OR B0180) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD40 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C4:0) [c] : 3haACP --> but2eACP + h2o (B0954 OR B0180) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD60 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C6:0) [c] : 3hhexACP --> h2o + thex2eACP (B0954 OR B0180) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD80 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C8:0) [c] : 3hoctACP --> h2o + toct2eACP (B0954 OR B0180) (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HCINNMH 3-hydroxycinnamate hydroxylase [c] : 3hcinnm + h + nadh + o2 --> dhcinnm + h2o + nad B0347 (:UNMAPPED-CPDS) 3HPPPNH 3-(3-hydroxy-phenyl)propionate hydroxylase [c] : 3hpppn + h + nadh + o2 --> dhpppn + h2o + nad B0347 (MHPHYDROXY-RXN) ((LEFT REMOVE PROTON)) 3KGK 3-keto-L-gulonate kinase [c] : 3dhguln + atp --> 3dhgulnp + adp + h B3580 (RXN0-704) ((RIGHT REMOVE PROTON)) 3NTD2pp 3'-nucleotidase (UMP) (periplasm) [p] : 3ump + h2o --> pi + uri B4213 3NTD4pp 3'-nucleotidase (CMP) (periplasm) [p] : 3cmp + h2o --> cytd + pi B4213 3NTD7pp 3'-nucleotidase (AMP) (periplasm) [p] : 3amp + h2o --> adn + pi B4213 3NTD9pp 3'-nucleotidase (GMP) (periplasm) [p] : 3gmp + h2o --> gsn + pi B4213 3OAR100 3-oxoacyl-[acyl-carrier-protein] reductase (n-C10:0) [c] : 3odecACP + h + nadph <==> 3hdecACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAR120 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:0) [c] : 3oddecACP + h + nadph <==> 3hddecACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR121 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:1) [c] : 3ocddec5eACP + h + nadph --> 3hcddec5eACP + nadp B1093 (RXN0-2142) ((LEFT REMOVE PROTON)) 3OAR140 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:0) [c] : 3omrsACP + h + nadph <==> 3hmrsACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAR141 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:1) [c] : 3ocmrs7eACP + h + nadph --> 3hcmrs7eACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR160 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:0) [c] : 3opalmACP + h + nadph <==> 3hpalmACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR161 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:1) [c] : 3ocpalm9eACP + h + nadph --> 3hcpalm9eACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR180 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0) [c] : 3ooctdACP + h + nadph <==> 3hoctaACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR181 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:1) [c] : 3ocvac11eACP + h + nadph --> 3hcvac11eACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR40 3-oxoacyl-[acyl-carrier-protein] reductase (n-C4:0) [c] : actACP + h + nadph <==> 3haACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAR60 3-oxoacyl-[acyl-carrier-protein] reductase (n-C6:0) [c] : 3ohexACP + h + nadph <==> 3hhexACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR80 3-oxoacyl-[acyl-carrier-protein] reductase (n-C8:0) [c] : 3ooctACP + h + nadph <==> 3hoctACP + nadp B1093 (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAS100 3-oxoacyl-[acyl-carrier-protein] synthase (n-C10:0) [c] : h + malACP + ocACP --> 3odecACP + ACP + co2 (B2323 OR B1095) (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAS120 3-oxoacyl-[acyl-carrier-protein] synthase (n-C12:0) [c] : dcaACP + h + malACP --> 3oddecACP + ACP + co2 (B2323 OR B1095) (3-OXOACYL-ACP-SYNTH-RXN) ((LEFT REMOVE PROTON)) 3OAS121 3-oxoacyl-[acyl-carrier-protein] synthase (n-C12:1) [c] : cdec3eACP + h + malACP --> 3ocddec5eACP + ACP + co2 B2323 (RXN0-2141) ((LEFT REMOVE PROTON)) 3OAS140 3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:0) [c] : ddcaACP + h + malACP --> 3omrsACP + ACP + co2 (B2323 OR B1095) (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAS141 3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:1) [c] : cddec5eACP + h + malACP --> 3ocmrs7eACP + ACP + co2 B2323 3OAS160 3-oxoacyl-[acyl-carrier-protein] synthase (n-C16:0) [c] : h + malACP + myrsACP --> 3opalmACP + ACP + co2 (B2323 OR B1095) (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAS161 3-oxoacyl-[acyl-carrier-protein] synthase (n-C16:1) [c] : h + malACP + tdeACP --> 3ocpalm9eACP + ACP + co2 B2323 (3-OXOACYL-ACP-SYNTH-RXN) ((LEFT REMOVE PROTON)) 3OAS180 3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:0) [c] : h + malACP + palmACP --> 3ooctdACP + ACP + co2 (B1095 OR B2323) (3-OXOACYL-ACP-SYNTH-RXN) ((LEFT REMOVE PROTON)) 3OAS181 3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:1) [c] : h + hdeACP + malACP --> 3ocvac11eACP + ACP + co2 B1095 (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAS60 3-oxoacyl-[acyl-carrier-protein] synthase (n-C6:0) [c] : butACP + h + malACP --> 3ohexACP + ACP + co2 (B2323 OR B1095) (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAS80 3-oxoacyl-[acyl-carrier-protein] synthase (n-C8:0) [c] : h + hexACP + malACP --> 3ooctACP + ACP + co2 (B2323 OR B1095) (3-OXOACYL-ACP-SYNTH-RXN) ((LEFT REMOVE PROTON)) 3PEPTabcpp tripeptide (LalaDgluMdap) transport via ABC system (periplasm) LalaDgluMdap[p] + atp[c] + h2o[c] --> LalaDgluMdap[c] + adp[c] + h[c] + pi[c] (B1329 AND B1244 AND B1245 AND B1246 AND B1247) 3PEPTtex LalaDgluMdap (tripeptide) transport via diffusion (extracellular to periplasm) LalaDgluMdap[e] <==> LalaDgluMdap[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 3UMPtex 3UMP transport via diffusion (extracellular to periplasm) 3ump[e] <==> 3ump[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 42A12BOOXpp "4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing)" [p] : dopa + h2o + o2 --> 34dhpac + h2o2 + nh4 B1386 4HOXPACDtex 4-hydroxyphenylacetaldehyde transport via diffusion (extracellular to periplasm) 4hoxpacd[e] <==> 4hoxpacd[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 4HTHRS 4-Hydroxy-L-threonine synthase [c] : h2o + phthr --> 4hthr + pi B0004 (:UNMAPPED-CPDS) 4PCP "tetrapeptide L,D-carboxypeptidase" [c] : LalaDgluMdapDala + h2o --> LalaDgluMdap + ala-D B1192 (:UNMAPPED-CPDS) 4PCPpp "tetrapeptide L,D-carboxypeptidase (periplasm)" [p] : LalaDgluMdapDala + h2o --> LalaDgluMdap + ala-D (:UNMAPPED-CPDS) 4PEPTabcpp tetrapeptide (LalaDgluMdapDala) transport via ABC system (periplasm) LalaDgluMdapDala[p] + atp[c] + h2o[c] --> LalaDgluMdapDala[c] + adp[c] + h[c] + pi[c] (B1243 AND B1244 AND B1245 AND B1246 AND B1247) (:UNMAPPED-CPDS) 4PEPTtex LalaDgluMdapDala (pentapeptide) transport via diffusion (extracellular to periplasm) LalaDgluMdapDala[e] <==> LalaDgluMdapDala[p] (B0241 OR B0929 OR B1377 OR B2215) (:UNMAPPED-CPDS) 5DGLCNR 5-dehydro-D-gluconate reductase [c] : 5dglcn + h + nadph <==> glcn + nadp B4266 (GLUCONATE-5-DEHYDROGENASE-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 5DGLCNt2rpp "5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm)" 5dglcn[p] + h[p] <==> 5dglcn[c] + h[c] B4265 5DGLCNtex 5-Dehydro-D-gluconate transport via diffusion (extracellular to periplasm) 5dglcn[e] <==> 5dglcn[p] (B0241 OR B1377 OR B0929 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) 5DOAN 5'-deoxyadenosine nuclosidase [c] : dad-5 + h2o --> 5drib + ade B0159 (:UNMAPPED-CPDS) A5PISO arabinose-5-phosphate isomerase [c] : ru5p-D <==> ara5p (B2708 OR B3197) (DARAB5PISOM-RXN) AACPS1 acyl-[acyl-carrier-protein] synthetase (n-C14:0) [c] : ACP + atp + ttdca --> amp + myrsACP + ppi (B2836 AND B1094) (ACYLACPSYNTH-RXN) (:METACYC :EXPANDED-RXN-MATCH) AACPS2 acyl-[acyl-carrier-protein] synthetase (n-C14:1) [c] : ACP + atp + ttdcea --> amp + ppi + tdeACP (B2836 AND B1094) (:UNMAPPED-CPDS) AACPS3 acyl-[acyl-carrier-protein] synthetase (n-C16:0) [c] : ACP + atp + hdca --> amp + palmACP + ppi (B2836 AND B1094) (ACYLACPSYNTH-RXN) (:EXPANDED-RXN-MATCH) AACPS4 acyl-[acyl-carrier-protein] synthetase (n-C16:1) [c] : ACP + atp + hdcea --> amp + hdeACP + ppi (B2836 AND B1094) (ACYLACPSYNTH-RXN) (:EXPANDED-RXN-MATCH) AACPS5 acyl-[acyl-carrier-protein] synthetase (n-C18:1) [c] : ACP + atp + ocdcea --> amp + octeACP + ppi (B2836 AND B1094) (ACYLACPSYNTH-RXN) (:METACYC :EXPANDED-RXN-MATCH) AACPS6 acyl-[acyl-carrier-protein] synthetase (n-C18:0) [c] : ACP + atp + ocdca --> amp + ocdcaACP + ppi (B2836 AND B1094) (ACYLACPSYNTH-RXN) (:METACYC :EXPANDED-RXN-MATCH) AACPS7 acyl-[acyl-carrier-protein] synthetase (n-C12:0) [c] : ACP + atp + ddca --> amp + ddcaACP + ppi (B2836 AND B1094) (ACYLACPSYNTH-RXN) (:METACYC :EXPANDED-RXN-MATCH) AACPS8 acyl-[acyl-carrier-protein] synthetase (n-C10:0) [c] : ACP + atp + dca --> amp + dcaACP + ppi (B2836 AND B1094) (ACYLACPSYNTH-RXN) (:METACYC :EXPANDED-RXN-MATCH) AACPS9 acyl-[acyl-carrier-protein] synthetase (n-C8:0) [c] : ACP + atp + octa --> amp + ocACP + ppi (B2836 AND B1094) (RXN-5741) AACTOOR Aminoacetone:oxygen oxidoreductase(deaminating)(flavin-containing) [c] : aact + h2o + o2 --> h2o2 + mthgxl + nh4 (AMACETOXID-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) AADDGT "dTDP-N-4-acetamido-4,6-dideoxy-D-galactose transferase" [c] : dtdp4aaddg + unagamu --> dtdp + h + unagamuf B4481 (FUC4NACTRANS-RXN) ((RIGHT REMOVE PROTON)) AAMYL alpha-amylase [c] : 14glucan --> malthx B1927 AAMYLpp alpha-amylase (periplasm) [p] : 14glucan --> malthx B3571 AB6PGH Arbutin 6-phosphate glucohydrolase [c] : arbt6p + h2o --> g6p + hqn B2901 ABTA 4-aminobutyrate transaminase [c] : 4abut + akg --> glu-L + sucsal (B2662 OR B1302) (GABATRANSAM-RXN) ABUTD Aminobutyraldehyde dehydrogenase [c] : 4abutn + h2o + nad --> 4abut + (2) h + nadh B1444 (AMINOBUTDEHYDROG-RXN) ABUTt2pp 4-aminobutyrate transport in via proton symport (periplasm) 4abut[p] + h[p] --> 4abut[c] + h[c] B2663 (TRANS-RXN-57) ABUTtex 4-aminobutyrate transport via diffusion (extracellular to periplasm) 4abut[e] <==> 4abut[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACACCT acetyl-CoA:acetoacetyl-CoA transferase [c] : acac + accoa --> aacoa + ac (B2221 AND B2222) (ACETOACETYL-COA-TRANSFER-RXN) ACACT1r acetyl-CoA C-acetyltransferase [c] : (2) accoa <==> aacoa + coa B2224 (ACETYL-COA-ACETYLTRANSFER-RXN) ACACt2pp acetoacetate transport via proton symport (periplasm) acac[p] + h[p] <==> acac[c] + h[c] B2223 ACACtex acetoacetate transport via diffusion (extracellular to periplasm) acac[e] <==> acac[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACALD acetaldehyde dehydrogenase (acetylating) [c] : acald + coa + nad <==> accoa + h + nadh (B0351 OR B1241) (ACETALD-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) ACALDtex acetaldehyde transport via diffusion (extracellular to periplasm) acald[e] <==> acald[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACALDtpp acetaldehyde reversible transport (periplasm) acald[p] <==> acald[c] (:DIFFUSION) (:INNER-MEMBRANE-DIFFUSION) ACANTHAT acetyl-CoA:anthranilate acetyltransferase [c] : accoa + anth --> acanth + coa B1463 ACBIPGT Adenosyl cobinamide phosphate guanyltransferase [c] : adocbip + gtp + h --> agdpcbi + ppi B1993 (COBINPGUANYLYLTRANS-RXN) ((LEFT REMOVE PROTON)) ACCOAC acetyl-CoA carboxylase [c] : accoa + atp + hco3 --> adp + h + malcoa + pi (B0185 AND B2316 AND B3255 AND B3256) ACCOAL acetate-CoA ligase (ADP-forming) [c] : atp + coa + ppa --> adp + pi + ppcoa B0335 (PROPANOATECOA-LIGASE-RXN) (:METACYC) ACGAL1PPpp N-acetyl-D-galactosamine 1-phosphatase (periplasm) [p] : acgal1p + h2o --> acgal + pi ACGAL1Ptex N-acetyl-D-galactosamine 1-phosphate transport via diffusion (extracellular to periplasm) acgal1p[e] <==> acgal1p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACGALtex N-acetyl-D-galactosamine transport via diffusion (extracellular to periplasm) acgal[e] <==> acgal[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACGAM1PPpp N-acetyl-D-glucosamine 1-phosphatase (periplasm) [p] : acgam1p + h2o --> acgam + pi ACGAM1Ptex N-acetyl-D-glucosamine 1-phosphate transport via diffusion (extracellular to periplasm) acgam1p[e] <==> acgam1p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACGAMK N-acetylglucosamine kinase [c] : acgam + atp --> acgam6p + adp + h B1119 (N-ACETYLGLUCOSAMINE-KINASE-RXN) ((RIGHT REMOVE PROTON)) ACGAMT UDP-N-acetylglucosamine:undecaprenylphosphate N-acetylglucosamine -1-phosphate transferase [c] : uacgam + udcpp --> ump + unaga B3784 (GLCNACPTRANS-RXN) ACGAptspp N-Acetyl-D-glucosamine transport via PEP:Pyr PTS (periplasm) acgam[p] + pep[c] --> acgam6p[c] + pyr[c] ((B2417 AND B1101 AND B2415 AND B2416) OR (B0679 AND B2415 AND B2416)) (TRANS-RXN-167) ACGAtex N-Acetyl-D-glucosamine transport via diffusion (extracellular to periplasm) acgam[e] <==> acgam[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACGK acetylglutamate kinase [c] : acglu + atp --> acg5p + adp B3959 (ACETYLGLUTKIN-RXN) ACGS N-acetylglutamate synthase [c] : accoa + glu-L --> acglu + coa + h B2818 (N-ACETYLTRANSFER-RXN) ((RIGHT REMOVE PROTON)) ACHBS 2-aceto-2-hydroxybutanoate synthase [c] : 2obut + h + pyr --> 2ahbut + co2 ((B3670 AND B3671) OR (B0077 AND B0078)) (ACETOOHBUTSYN-RXN) ((LEFT REMOVE PROTON)) ACKr acetate kinase [c] : ac + atp <==> actp + adp (B3115 OR B2296 OR B1849) (ACETATEKIN-RXN) ACLS acetolactate synthase [c] : h + (2) pyr --> alac-S + co2 ((B3670 AND B3671) OR (B0077 AND B0078)) (ACETOLACTSYN-RXN) ((LEFT REMOVE PROTON)) ACM6PH N-acetylmuramate 6-phosphate hydrolase [c] : acmum6p + h2o --> acgam6p + lac-D ACMAMUT UDP-N-acetyl-D-mannosaminuronic acid transferase [c] : uacmamu + unaga --> h + udp + unagamu B3794 (UDPMANACATRANS-RXN) ((RIGHT REMOVE PROTON)) ACMANAptspp N-acetyl-D-mannosamine transport via PTS (periplasm) acmana[p] + pep[c] --> acmanap[c] + pyr[c] (B1817 AND B1818 AND B1819 AND B2415 AND B2416) ACMANAtex N-acetyl-D-mannosamine transport via diffusion (extracellular to periplasm) acmana[e] <==> acmana[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACMUMptspp N-acetylmuramate transport via PEP:Pyr PTS (periplasm) acmum[p] + pep[c] --> acmum6p[c] + pyr[c] (B2417 AND B2429 AND B2415 AND B2416) ACMUMtex N-acetylmuramate transport via diffusion (extracellular to periplasm) acmum[e] --> acmum[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACNAMt2pp N-acetylneuraminate proton symport (periplasm) acnam[p] + h[p] --> acnam[c] + h[c] B3224 (TRANS-RXN-25) ACNAMtex N-acetylneuraminate transport via diffusion (extracellular to periplasm) acnam[e] <==> acnam[p] (B4311 OR B0929 OR B2215) ACNML N-Acetylneuraminate lyase [c] : acnam --> acmana + pyr B3225 (ACNEULY-RXN) ACOAD1f acyl-CoA dehydrogenase (butanoyl-CoA) [c] : btcoa + fad --> b2coa + fadh2 B0221 ACOAD2f acyl-CoA dehydrogenase (hexanoyl-CoA) [c] : fad + hxcoa --> fadh2 + hx2coa B0221 ACOAD3f acyl-CoA dehydrogenase (octanoyl-CoA) [c] : fad + occoa --> fadh2 + oc2coa B0221 ACOAD4f acyl-CoA dehydrogenase (decanoyl-CoA) [c] : dcacoa + fad --> dc2coa + fadh2 B0221 (ACYLCOADEHYDROG-RXN) (:EXPANDED-RXN-MATCH) ACOAD5f acyl-CoA dehydrogenase (dodecanoyl-CoA) [c] : ddcacoa + fad --> dd2coa + fadh2 B0221 ACOAD6f acyl-CoA dehydrogenase (tetradecanoyl-CoA) [c] : fad + tdcoa --> fadh2 + td2coa B0221 (ACYLCOADEHYDROG-RXN) (:METACYC :EXPANDED-RXN-MATCH) ACOAD7f acyl-CoA dehydrogenase (hexadecanoyl-CoA) [c] : fad + pmtcoa --> fadh2 + hdd2coa B0221 ACOAD8f acyl-CoA dehydrogenase (octadecanoyl-CoA) [c] : fad + stcoa --> fadh2 + od2coa B0221 ACOATA Acetyl-CoA ACP transacylase [c] : ACP + accoa <==> acACP + coa (B1094 AND B1091) (ACP-S-ACETYLTRANSFER-RXN) ACODA acetylornithine deacetylase [c] : acorn + h2o --> ac + orn B3957 (ACETYLORNDEACET-RXN) ACOLIPAtex arabinose modified core oligosaccharide lipid A transport via vector (periplasm to extracellular) acolipa[p] --> acolipa[e] ACONIs aconitate isomerase (spontaneous) [c] : acon-T <==> acon-C (RXN0-2442) ACONMT Trans-aconitate methyltransferase [c] : acon-T + amet --> aconm + ahcys B1519 (RXN0-2441) ACONTa "aconitase (half-reaction A, Citrate hydro-lyase)" [c] : cit <==> acon-C + h2o (B1276 OR B0118) (ACONITATEDEHYDR-RXN) ACONTb "aconitase (half-reaction B, Isocitrate hydro-lyase)" [c] : acon-C + h2o <==> icit (B0118 OR B1276) (ACONITATEHYDR-RXN) ACOTA acetylornithine transaminase [c] : acorn + akg <==> acg5sa + glu-L (B3359 OR B1748) (ACETYLORNTRANSAM-RXN) ACPS1 acyl-carrier protein synthase [c] : apoACP + coa --> ACP + h + pap (B2563 OR B3475) (HOLO-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) ACS acetyl-CoA synthetase [c] : ac + atp + coa --> accoa + amp + ppi B4069 (ACETATE--COA-LIGASE-RXN) ACSERtex O-Acetyl-L-serine transport via diffusion (extracellular to periplasm) acser[e] <==> acser[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ACSERtpp O-Acetyl-L-serine export via facilitated transport acser[c] --> acser[p] (B2578 OR B1533) (RXN0-1923) ACt2rpp acetate reversible transport via proton symport (periplasm) ac[p] + h[p] <==> ac[c] + h[c] (RXN0-1981) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) ACt4pp Na+/Acetate symport (periplasm) ac[p] + na1[p] --> ac[c] + na1[c] B4067 ACtex Acetate transport via diffusion (extracellular to periplasm) ac[e] <==> ac[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ADA Adenosine deaminase [c] : adn + h + h2o --> ins + nh4 B1623 (ADENODEAMIN-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ADCL 4-aminobenzoate synthase [c] : 4adcho --> 4abz + h + pyr B1096 (ADCLY-RXN) ((RIGHT REMOVE PROTON)) ADCS 4-amino-4-deoxychorismate synthase [c] : chor + gln-L --> 4adcho + glu-L (B3360 AND B1812) (PABASYN-RXN) ADD adenine deaminase [c] : ade + h + h2o --> hxan + nh4 B3665 (ADENINE-DEAMINASE-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ADEt2rpp adenine transport via proton symport (reversible) (periplasm) ade[p] + h[p] <==> ade[c] + h[c] B3654 ADEtex adenine transport via diffusion (extracellular to periplasm) ade[e] <==> ade[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ADK1 adenylate kinase [c] : amp + atp <==> (2) adp B0474 (ADENYL-KIN-RXN) ADK3 adentylate kinase (GTP) [c] : amp + gtp <==> adp + gdp B0474 ADK4 adentylate kinase (ITP) [c] : amp + itp <==> adp + idp B0474 ADMDC adenosylmethionine decarboxylase [c] : amet + h --> ametam + co2 B0120 (SAMDECARB-RXN) ((LEFT REMOVE PROTON)) ADNCYC adenylate cyclase [c] : atp --> camp + ppi B3806 (ADENYLATECYC-RXN) ADNK1 adenosine kinase [c] : adn + atp --> adp + amp + h B0474 (ADENOSINE-KINASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) ADNt2pp adenosine transport in via proton symport (periplasm) adn[p] + h[p] --> adn[c] + h[c] (B2964 OR B2393) (TRANS-RXN-108A) ADNt2rpp "adenosine transport in via proton symport, reversible (periplasm)" adn[p] + h[p] <==> adn[c] + h[c] B2406 (TRANS-RXN-108A) ADNtex adenosine transport via diffusion (extracellular to periplasm) adn[e] <==> adn[p] B0411 ADNUC adenosine hydrolase [c] : adn + h2o --> ade + rib-D B0030 (ADENOSINE-NUCLEOSIDASE-RXN) ADOCBIK Adenosyl cobinamide kinase [c] : adocbi + atp --> adocbip + adp + h B1993 (COBINAMIDEKIN-RXN) ((RIGHT REMOVE PROTON)) ADOCBLabcpp Adenosylcobalamin transport via ABC system (periplasm) adocbl[p] + atp[c] + h2o[c] --> adocbl[c] + adp[c] + h[c] + pi[c] (B1711 AND B1709 AND B0158) ADOCBLS Adenosylcobalamin 5'-phosphate synthase [c] : agdpcbi + rdmbzi --> adocbl + gmp + h B1992 (COBALAMINSYN-RXN) ((RIGHT REMOVE PROTON)) ADOCBLtonex Adenosylcobalimin transport via ton system (extermal) adocbl[e] + h[p] --> adocbl[p] + h[c] (B3966 AND (B1252 AND B3005 AND B3006)) ADPRDP ADPribose diphosphatase [c] : adprib + h2o --> amp + (2) h + r5p B3397 (RXN0-1441) ((RIGHT REMOVE PROTON)) ADPT adenine phosphoribosyltransferase [c] : ade + prpp --> amp + ppi B0469 (ADENPRIBOSYLTRAN-RXN) ADSK adenylyl-sulfate kinase [c] : aps + atp --> adp + h + paps B2750 (ADENYLYLSULFKIN-RXN) ((RIGHT REMOVE PROTON)) ADSL1r adenylsuccinate lyase [c] : dcamp <==> amp + fum B1131 (AMPSYN-RXN) ADSL2r adenylosuccinate lyase [c] : 25aics <==> aicar + fum B1131 (AICARSYN-RXN) ADSS adenylosuccinate synthase [c] : asp-L + gtp + imp --> dcamp + gdp + (2) h + pi B4177 (ADENYLOSUCCINATE-SYNTHASE-RXN) ((RIGHT REMOVE PROTON)) AGDC N-acetylglucosamine-6-phosphate deacetylase [c] : acgam6p + h2o --> ac + gam6p B0677 (NAG6PDEACET-RXN) AGM3PA N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase [c] : anhgm3p + h2o --> LalaDgluMdap + anhgm B0110 (:UNMAPPED-CPDS) AGM3PApp N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase (periplasm) [p] : anhgm3p + h2o --> LalaDgluMdap + anhgm (B4169 OR B2435 OR B2817) (:UNMAPPED-CPDS) AGM3PH "N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide beta -1,4-N-acetylglucosaminidase" [c] : anhgm3p + h2o --> acgam + anhm3p B1107 (:UNMAPPED-CPDS) AGM3Pt2pp GlcNAc-anhMurNAc tripeptide transport in via proton symport (periplasm) anhgm3p[p] + h[p] --> anhgm3p[c] + h[c] B0433 (:UNMAPPED-CPDS) AGM4PA N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide amidase [c] : anhgm4p + h2o --> LalaDgluMdapDala + anhgm B0110 (:UNMAPPED-CPDS) AGM4PApp N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide amidase (periplasm) [p] : anhgm4p + h2o --> LalaDgluMdapDala + anhgm (B2817 OR B4169 OR B2435) (:UNMAPPED-CPDS) AGM4PCP "N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase" [c] : anhgm4p + h2o --> ala-D + anhgm3p B1192 (:UNMAPPED-CPDS) AGM4PCPpp "N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase (periplasmic)" [p] : anhgm4p + h2o --> ala-D + anhgm3p (:UNMAPPED-CPDS) AGM4PH "N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide beta -1,4-N-acetylglucosaminidase" [c] : anhgm4p + h2o --> acgam + anhm4p B1107 (:UNMAPPED-CPDS) AGM4Pt2pp GlcNAc-anhMurNAc tetrapeptide transport in via proton symport (periplasm) anhgm4p[p] + h[p] --> anhgm4p[c] + h[c] B0433 (:UNMAPPED-CPDS) AGMH "N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl beta -1,4-N-acetylglucosaminidase" [c] : anhgm + h2o --> acgam + anhm B1107 (:UNMAPPED-CPDS) AGMHE ADP-D-glycero-D-manno-heptose epimerase [c] : adphep-DD --> adphep-LD B3619 (5.1.3.20-RXN) AGMT agmatinase [c] : agm + h2o --> ptrc + urea B2937 (AGMATIN-RXN) AGMt2pp GlcNAc-anhMurNAc transport in via proton symport (periplasm) anhgm[p] + h[p] --> anhgm[c] + h[c] B0433 (:UNMAPPED-CPDS) AGMtex agmatine transport via diffusion (extracellular to periplasm) agm[e] <==> agm[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) AGPAT120 1-tetradecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C12:0) [c] : 1ddecg3p + ddcaACP --> ACP + pa120 B3018 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) AGPAT140 1-tetradecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C14:0) [c] : 1tdecg3p + myrsACP --> ACP + pa140 B3018 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) AGPAT141 1-tetradec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C14:1) [c] : 1tdec7eg3p + tdeACP --> ACP + pa141 B3018 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) AGPAT160 1-hexadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:0) [c] : 1hdecg3p + palmACP --> ACP + pa160 B3018 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) AGPAT161 1-hexadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:1) [c] : 1hdec9eg3p + hdeACP --> ACP + pa161 B3018 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) AGPAT180 1-octadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C18:0) [c] : 1odecg3p + ocdcaACP --> ACP + pa180 B3018 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) AGPAT181 1-octadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C18:1) [c] : 1odec11eg3p + octeACP --> ACP + pa181 B3018 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) AGPR N-acetyl-g-glutamyl-phosphate reductase [c] : acg5sa + nadp + pi <==> acg5p + h + nadph B3958 (N-ACETYLGLUTPREDUCT-RXN) ((RIGHT REMOVE PROTON)) AGt3 silver transport out via proton antiport ag[c] + h[e] --> ag[e] + h[c] (B0572 AND B0573 AND B0574 AND B0575) AHCYSNS S-adenosylhomocysteine nucleosidase [c] : ahcys + h2o --> ade + rhcys B0159 (ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN) AICART phosphoribosylaminoimidazolecarboxamide formyltransferase [c] : 10fthf + aicar <==> fprica + thf B4006 (AICARTRANSFORM-RXN) AIRC2 phosphoribosylaminoimidazole carboxylase [c] : air + atp + hco3 --> 5caiz + adp + h + pi B0522 AIRC3 phosphoribosylaminoimidazole carboxylase (mutase rxn) [c] : 5aizc <==> 5caiz B0523 (RXN0-743) AKGDH 2-Oxogluterate dehydrogenase [c] : akg + coa + nad --> co2 + nadh + succoa (B0116 AND B0726 AND B0727) (2OXOGLUTARATEDEH-RXN) AKGt2rpp 2-oxoglutarate reversible transport via symport (periplasm) akg[p] + h[p] <==> akg[c] + h[c] B2587 (TRANS-RXN-23) AKGtex alpha-ketoglutarate transport via diffusion (extracellular to periplasm) akg[e] <==> akg[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ALAabcpp L-alanine transport via ABC system (periplasm) ala-L[p] + atp[c] + h2o[c] --> adp[c] + ala-L[c] + h[c] + pi[c] (B3454 AND B3455 AND B3457 AND B3460 AND B3456) ALAALAabcpp D-alanyl-D-alanine (DalaDala) transport via ABC system (periplasm) alaala[p] + atp[c] + h2o[c] --> adp[c] + alaala[c] + h[c] + pi[c] ((B3544 AND B3543 AND B3542 AND B3541 AND B3540) OR (B1487 AND B1486 AND B1485 AND B1484 AND B1483)) (ABC-8-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) ALAALAD D-alanine-D-alanine dipeptidase [c] : alaala + h2o --> (2) ala-D B1488 (3.4.16.4-RXN) ALAALAr D-alanine-D-alanine ligase (reversible) [c] : (2) ala-D + atp <==> adp + alaala + h + pi (B0381 OR B0092) (DALADALALIG-RXN) ((RIGHT REMOVE PROTON)) ALAALAtex D-alanyl-D-alanine (DalaDala) transport via diffusion (extracellular to periplasm) alaala[e] <==> alaala[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ALAGLUE L-alanyl-gamma-glutamate epimerase [c] : LalaDglu <==> LalaLglu B1325 (:UNMAPPED-CPDS) ALAR alanine racemase [c] : ala-L <==> ala-D (B4053 OR B1190) (ALARACECAT-RXN) ALAt2pp L-alanine transport in via proton symport (periplasm) ala-L[p] + h[p] --> ala-L[c] + h[c] B4208 ALAt4pp L-alanine transport in via sodium symport (periplasm) ala-L[p] + na1[p] --> ala-L[c] + na1[c] B0007 (TRANS-RXN-125) ALATA_D2 D-alanine transaminase [c] : ala-D + pydx5p --> pyam5p + pyr (B2551 OR B0870) ALATA_L L-alanine transaminase [c] : akg + ala-L <==> glu-L + pyr (ALANINE-AMINOTRANSFERASE-RXN) ALATA_L2 alanine transaminase [c] : ala-L + pydx5p --> pyam5p + pyr (B2551 OR B0870) ALAtex L-alanine transport via diffusion (extracellular to periplasm) ala-L[e] <==> ala-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ALATRS Alanyl-tRNA synthetase [c] : ala-L + atp + trnaala --> alatrna + amp + ppi B2697 (ALANINE--TRNA-LIGASE-RXN) ALCD19 alcohol dehydrogenase (glycerol) [c] : glyald + h + nadh <==> glyc + nad B0356 ALCD2x alcohol dehydrogenase (ethanol) [c] : etoh + nad <==> acald + h + nadh (B0356 OR B1478 OR B1241) (ALCOHOL-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) ALDD19x "aldehyde dehydrogenase (phenylacetaldehyde, NAD)" [c] : h2o + nad + pacald --> (2) h + nadh + pac B1385 (PHENDEHYD-RXN) ((RIGHT REMOVE PROTON)) ALDD2x "aldehyde dehydrogenase (acetaldehyde, NAD)" [c] : acald + h2o + nad --> ac + (2) h + nadh B1300 (RXN66-3) (:METACYC (RIGHT REMOVE PROTON)) ALDD2y "aldehyde dehydrogenase (acetaldehyde, NADP)" [c] : acald + h2o + nadp --> ac + (2) h + nadph B3588 (RXN0-3962) ALDD3y "aldehyde dehydrogenase (propanal, NADP)" [c] : h2o + nadp + ppal --> (2) h + nadph + ppa B3588 ALDD4 "aldehyde dehydrogenase (butanal, NAD)" [c] : btal + h2o + nad --> but + (2) h + nadh ALLabcpp D-allose transport via ABC system (periplasm) all-D[p] + atp[c] + h2o[c] --> adp[c] + all-D[c] + h[c] + pi[c] (B4087 AND B4088 AND B4086) (ABC-42-RXN) ((RIGHT REMOVE PROTON)) ALLK Allose kinase [c] : all-D + atp --> adp + all6p + h B4084 (ALLOSE-KINASE-RXN) ((RIGHT REMOVE PROTON)) ALLPI Allose 6-phosphate isomerase [c] : all6p <==> allul6p B4090 (RXN0-303) ALLTAMH allantoate amidohydrolase [c] : alltt + (2) h + (2) h2o --> co2 + (2) nh4 + urdglyc B0516 ALLtex Allose transport via diffusion (extracellular to periplasm) all-D[e] <==> all-D[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) ALLTN allantoinase [c] : alltn + h2o --> alltt + h B0512 (ALLANTOINASE-RXN) ((RIGHT REMOVE PROTON)) ALLTNt2rpp allantoin transport in via proton symport (periplasm) alltn[p] + h[p] <==> alltn[c] + h[c] B0511 ALLTNtex allantoin transport via diffusion (extracellular to periplasm) alltn[e] <==> alltn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ALLULPE Allulose 6-phosphate epimerase [c] : allul6p <==> f6p B4085 (RXN0-304) ALPATE160pp "apolipoprotein N-acyltransferase (phosphatidylethanolamine, periplasm)" [p] : alpp + pe160 --> 2agpe160 + lpp (B0657 AND B1677) ALPATG160pp "apolipoprotein N-acyltransferase (phosphatidylglycerol, periplasm)" [p] : alpp + pg160 --> 2agpg160 + lpp (B0657 AND B1677) ALR2 aldose reductase (methylglyoxal) [c] : h + mthgxl + nadph --> acetol + nadp (B3012 OR B0207 OR B1781 OR B3001) (RXN0-4281) ((LEFT REMOVE PROTON)) ALR4x aldose reductase (acetol) [c] : acetol + h + nadh --> 12ppd-R + nad B3945 (:UNMAPPED-CPDS) ALTRH altronate hydrolase [c] : altrn --> 2ddglcn + h2o B3091 (ALTRODEHYDRAT-RXN) AM3PA anhydrous-N-Acetylmuramyl-tripeptide amidase [c] : anhm3p + h2o --> LalaDgluMdap + anhm B0110 (:UNMAPPED-CPDS) AM4PA anhydrous-N-Acetylmuramyl-tetrapeptide amidase [c] : anhm4p + h2o --> LalaDgluMdapDala + anhm B0110 (:UNMAPPED-CPDS) AM4PCP "anhydrous-N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase" [c] : anhm4p + h2o --> ala-D + anhm3p B1192 (:UNMAPPED-CPDS) AMALT1 Amylomaltase (maltotriose) [c] : malt + malttr --> glc-D + maltttr B3416 (AMYLOMALT-RXN) AMALT2 Amylomaltase (maltotetraose) [c] : malt + maltttr --> glc-D + maltpt B3416 AMALT3 Amylomaltase (maltopentaose) [c] : malt + maltpt --> glc-D + malthx B3416 AMALT4 Amylomaltase (maltohexaose) [c] : malt + malthx --> glc-D + malthp B3416 AMANAPEr N-acetylmannosamine 6-phosphate epimerase [c] : acmanap <==> acgam6p B3223 (NANE-RXN) AMANK N-acetyl-D-mannosamine kinase [c] : acmana + atp --> acmanap + adp + h B3222 (NANK-RXN) ((RIGHT REMOVE PROTON)) AMAOTr adenosylmethionine-8-amino-7-oxononanoate transaminase [c] : 8aonn + amet <==> amob + dann B0774 (DAPASYN-RXN) AMMQLT8 S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8) [c] : 2dmmql8 + amet --> ahcys + h + mql8 B3833 AMPMS2 4-amino-2-methyl-5-phosphomethylpyrimidine synthetase [c] : air + h2o + nad --> 4ampm + (2) for + (3) h + nadh B3994 AMPN AMP nucleosidase [c] : amp + h2o --> ade + r5p B1982 (AMP-NUCLEOSID-RXN) AMPTASECG alanyl aminopeptidase (cys-gly) [c] : cgly + h2o --> cys-L + gly (B0237 OR B4260 OR B2523 OR B0932) (:UNMAPPED-CPDS) AMPTASEPG aminopeptidase (pro-gly) [c] : h2o + progly --> gly + pro-L (B0932 OR B4260 OR B0237 OR B2523) (:UNMAPPED-CPDS) AMPtex AMP transport via diffusion (extracellular to periplasm) amp[e] <==> amp[p] (B0929 OR B1377 OR B2215 OR B0241) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ANHGMtex GlcNAc-anhMurNAc transport via diffusion (extracellular to periplasm) anhgm[e] <==> anhgm[p] (B0241 OR B0929 OR B1377 OR B2215) (:UNMAPPED-CPDS) ANHMK "1,6-anhydrous-N-Acetylmuramate kinase" [c] : anhm + atp + h2o --> acmum6p + adp + h B1640 ANPRT anthranilate phosphoribosyltransferase [c] : anth + prpp --> ppi + pran B1263 (PRTRANS-RXN) ANS anthranilate synthase [c] : chor + gln-L --> anth + glu-L + h + pyr (B1263 AND B1264) (ANTHRANSYN-RXN) ((RIGHT REMOVE PROTON)) AOBUTDs L-2-amino-3-oxobutanoate decarboxylation [c] : 2aobut + h --> aact + co2 (THREOSPON-RXN) ((LEFT REMOVE PROTON)) AOXSr 8-amino-7-oxononanoate synthase [c] : ala-L + h + pmcoa <==> 8aonn + co2 + coa B0776 (7KAPSYN-RXN) ((LEFT REMOVE PROTON)) AP4AH Ap4A hydrolase [c] : ap4a + h2o --> (2) adp + (2) h B0049 (3.6.1.41-RXN) ((RIGHT REMOVE PROTON)) AP5AH Ap5A hydrolase [c] : ap5a + h2o --> adp + atp + (2) h B0049 (:UNMAPPED-CPDS) APRAUR 5-amino-6-(5-phosphoribosylamino)uracil reductase [c] : 5apru + h + nadph --> 5aprbu + nadp B0414 (RIBOFLAVINSYNREDUC-RXN) ARAI L-arabinose isomerase [c] : arab-L <==> rbl-L B0062 (ARABISOM-RXN) ARBabcpp L-arabinose transport via ABC system (periplasm) arab-L[p] + atp[c] + h2o[c] --> adp[c] + arab-L[c] + h[c] + pi[c] (B1901 AND B1900 AND B4460) (ABC-2-RXN) ((RIGHT REMOVE PROTON)) ARBt2rpp L-arabinose transport via proton symport (periplasm) arab-L[p] + h[p] <==> arab-L[c] + h[c] B2841 (TRANS-RXN-10) ARBt3ipp L-arabinose transport via proton antiport (periplasm) arab-L[c] + h[p] --> arab-L[p] + h[c] B1528 (TRANS-RXN-40) ARBtex L-arabinose transport via diffusion (extracellular to periplasm) arab-L[e] <==> arab-L[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) ARBTNabcpp aerobactin transport via ABC system (periplasm) arbtn-fe3[p] + atp[c] + h2o[c] --> adp[c] + arbtn-fe3[c] + h[c] + pi[c] (B0153 AND B0151 AND B0152) (:UNMAPPED-CPDS) ARBTNexs aerobactin Fe-loading reaction (spontaneous) [e] : arbtn + fe3 --> arbtn-fe3 (:UNMAPPED-CPDS) ARBTNR1 aerobactin reductase [c] : (2) arbtn-fe3 + fadh2 --> (2) arbtn + fad + (2) fe2 + (2) h (:UNMAPPED-CPDS) ARBTNR2 aerobactin reductase [c] : (2) arbtn-fe3 + fmnh2 --> (2) arbtn + (2) fe2 + fmn + (2) h (:UNMAPPED-CPDS) ARBTNR3 aerobactin reductase [c] : (2) arbtn-fe3 + rbflvrd --> (2) arbtn + (2) fe2 + (2) h + ribflv (:UNMAPPED-CPDS) ARBTNtex aerobactin secretion (to extracellular) arbtn[p] + h[p] --> arbtn[e] + h[c] ARBTNtonex aerobactin transport via ton system (extracellular) arbtn-fe3[e] + h[p] --> arbtn-fe3[p] + h[c] (:UNMAPPED-CPDS) ARBTNtpp aerobactin secretion (to periplasm) arbtn[c] + h[p] --> arbtn[p] + h[c] ARGabcpp L-arginine transport via ABC system (periplasm) arg-L[p] + atp[c] + h2o[c] --> adp[c] + arg-L[c] + h[c] + pi[c] ((B0863 AND B0860 AND B0861 AND B0864 AND B0862) OR (B2310 AND B2307 AND B2306 AND B2308)) (ABC-4-RXN) ((RIGHT REMOVE PROTON)) ARGAGMt7pp Arginine/agmatine antiport (periplasm) agm[c] + arg-L[p] <==> agm[p] + arg-L[c] B4115 (RXN0-2162) ARGDC arginine decarboxylase [c] : arg-L + h --> agm + co2 B4117 (ARGDECARBOX-RXN) ((LEFT REMOVE PROTON)) ARGDCpp arginine decarboxylase [p] : arg-L + h --> agm + co2 B2938 ARGORNt7pp arginine/ornithine antiporter (periplasm) arg-L[p] + orn[c] <==> arg-L[c] + orn[p] B1605 ARGSL argininosuccinate lyase [c] : argsuc <==> arg-L + fum B3960 (ARGSUCCINLYA-RXN) ARGSS argininosuccinate synthase [c] : asp-L + atp + citr-L --> amp + argsuc + h + ppi B3172 (ARGSUCCINSYN-RXN) ((RIGHT REMOVE PROTON)) ARGt3pp L-arginine transport out via proton antiport (cytoplasm to periplasm) arg-L[c] + h[p] --> arg-L[p] + h[c] B2923 ARGtex L-arginine transport via diffusion (extracellular to periplasm) arg-L[e] <==> arg-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ARGTRS Arginyl-tRNA synthetase [c] : arg-L + atp + trnaarg --> amp + argtrna + ppi B1876 (ARGININE--TRNA-LIGASE-RXN) ASAD aspartate-semialdehyde dehydrogenase [c] : aspsa + nadp + pi <==> 4pasp + h + nadph B3433 (ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN) ((RIGHT REMOVE PROTON)) ASCBPL L-ascorbate 6-phosphate lactonase [c] : ascb6p + h2o --> 3dhgulnp + h B4192 ASCBptspp L-ascorbate transport via PEP:Pyr PTS (periplasm) ascb-L[p] + pep[c] --> ascb6p[c] + pyr[c] (B2415 AND B2416 AND B4195 AND B4194 AND B4193) (RXN0-2461) ASCBtex L-ascorbate transport via diffusion (extracellular to periplasm) ascb-L[e] <==> ascb-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ASNabcpp L-asparagine transport via ABC system (periplasm) asn-L[p] + atp[c] + h2o[c] --> adp[c] + asn-L[c] + h[c] + pi[c] ASNN L-asparaginase [c] : asn-L + h2o --> asp-L + nh4 (B1767 OR B0828) (ASPARAGHYD-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ASNNpp L-asparaginase [p] : asn-L + h2o --> asp-L + nh4 B2957 ASNS1 asparagine synthase (glutamine-hydrolysing) [c] : asp-L + atp + gln-L + h2o --> amp + asn-L + glu-L + h + ppi B0674 (ASNSYNB-RXN) ((RIGHT REMOVE PROTON)) ASNS2 asparagine synthetase [c] : asp-L + atp + nh4 --> amp + asn-L + h + ppi B3744 (ASNSYNA-RXN) ((LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT REMOVE PROTON)) ASNt2rpp L-asparagine reversible transport via proton symport (periplasm) asn-L[p] + h[p] <==> asn-L[c] + h[c] B1453 (TRANS-RXN-262) ASNtex L-asparagine transport via diffusion (extracellular to periplasm) asn-L[e] <==> asn-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ASNTRS Asparaginyl-tRNA synthetase [c] : asn-L + atp + trnaasn --> amp + asntrna + ppi B0930 (ASPARAGINE--TRNA-LIGASE-RXN) ASO3t8pp arsenite efflux via ATP hydrolysis (periplasm) aso3[c] + atp[c] + h2o[c] --> adp[c] + aso3[p] + h[c] + pi[c] B3502 (3.6.3.16-RXN) (:METACYC (RIGHT REMOVE PROTON)) ASO3tex arsenite transport via diffusion (extracellular to periplasm) aso3[e] <==> aso3[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ASP1DC aspartate 1-decarboxylase [c] : asp-L + h --> ala-B + co2 B0131 (ASPDECARBOX-RXN) ((LEFT REMOVE PROTON)) ASPabcpp L-aspartate transport via ABC system (periplasm) asp-L[p] + atp[c] + h2o[c] --> adp[c] + asp-L[c] + h[c] + pi[c] (B0655 AND B0654 AND B0653 AND B0652) ASPCT aspartate carbamoyltransferase [c] : asp-L + cbp --> cbasp + h + pi (B4244 AND B4245) (ASPCARBTRANS-RXN) ((RIGHT REMOVE PROTON)) ASPK aspartate kinase [c] : asp-L + atp <==> 4pasp + adp (B0002 OR B3940 OR B4024) (ASPARTATEKIN-RXN) ASPO3 L-aspartate oxidase [c] : asp-L + q8 --> h + iasp + q8h2 B2574 ASPO4 L-aspartate oxidase [c] : asp-L + mqn8 --> h + iasp + mql8 B2574 ASPO5 L-aspartate oxidase [c] : asp-L + fum --> h + iasp + succ B2574 ASPO6 L-aspartate oxidase [c] : asp-L + o2 --> h + h2o2 + iasp B2574 (L-ASPARTATE-OXID-RXN) ((RIGHT REMOVE PROTON)) ASPT L-aspartase [c] : asp-L --> fum + nh4 B4139 (ASPARTASE-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ASPt2_2pp Aspartate transport via proton symport (2 H) (periplasm) asp-L[p] + (2) h[p] --> asp-L[c] + (2) h[c] B3528 (TRANS-RXN-122A) ASPt2_3pp L-asparate transport via proton symport (3 H) (periplasm) asp-L[p] + (3) h[p] --> asp-L[c] + (3) h[c] (B4138 OR B4123) (TRANS-RXN-122A) ASPt2pp L-aspartate transport in via proton symport (periplasm) asp-L[p] + h[p] --> asp-L[c] + h[c] B4077 (TRANS-RXN-122A) ASPTA aspartate transaminase [c] : akg + asp-L <==> glu-L + oaa B0928 (ASPAMINOTRANS-RXN) ASPtex L-aspartate transport via diffusion (extracellular to periplasm) asp-L[e] <==> asp-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ASPTRS Aspartyl-tRNA synthetase [c] : asp-L + atp + trnaasp --> amp + asptrna + ppi B1866 (ASPARTATE--TRNA-LIGASE-RXN) ASR arsenate reductase [c] : aso4 + (2) gthrd --> aso3 + gthox + h2o (B3503 AND B1064) AST Arginine succinyltransferase [c] : arg-L + succoa --> coa + h + sucarg B1747 (ARGININE-N-SUCCINYLTRANSFERASE-RXN) ((RIGHT REMOVE PROTON)) ATHRDHr L-allo-threonine dehydrogenase [c] : athr-L + nadp <==> 2aobut + h + nadph B1539 ATPHs ATP spontanous amine hydrolysis [c] : atp + h + h2o --> itp + nh4 (ATP-DEAMINASE-RXN) (:METACYC (LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ATPM ATP maintenance requirement [c] : atp + h2o --> adp + h + pi (RXN0-1061 3.6.3.1-RXN 3.6.3.15-RXN 3.6.3.46-RXN 3.6.3.49-RXN 3.6.3.50-RXN 3.6.3.51-RXN 3.6.3.52-RXN 3.6.4.1-RXN 3.6.4.2-RXN 3.6.4.3-RXN 3.6.4.4-RXN 3.6.4.5-RXN 3.6.4.6-RXN 3.6.4.7-RXN 3.6.4.8-RXN 3.6.4.9-RXN 3.6.4.11-RXN ADENOSINETRIPHOSPHATASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) ATPPRT ATP phosphoribosyltransferase [c] : atp + prpp --> ppi + prbatp B2019 (ATPPHOSPHORIBOSYLTRANS-RXN) ATPS4rpp ATP synthase (four protons for one ATP) (periplasm) adp[c] + (4) h[p] + pi[c] <==> atp[c] + (3) h[c] + h2o[c] (((B3736 AND B3737 AND B3738) AND (B3731 AND B3732 AND B3733 AND B3734 AND B3735)) OR ((B3736 AND B3737 AND B3738) AND (B3731 AND B3732 AND B3733 AND B3734 AND B3735) AND B3739)) (ATPSYN-RXN) BALAt2pp beta-alanine transport in via proton symport (periplasm) ala-B[p] + h[p] --> ala-B[c] + h[c] B4208 BALAtex beta-alanine transport via diffusion (extracellular to periplasm) ala-B[e] <==> ala-B[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) BETALDHx betaine-aldehyde dehydrogenase [c] : betald + h2o + nad --> glyb + (2) h + nadh B0312 (BADH-RXN) ((RIGHT REMOVE PROTON)) BETALDHy betaine-aldehyde dehydrogenase [c] : betald + h2o + nadp --> glyb + (2) h + nadph B0312 BPNT "3',5'-bisphosphate nucleotidase" [c] : h2o + pap --> amp + pi "(|3'(2'),5'-BISPHOSPHATE-NUCLEOTIDASE-RXN|)" (:METACYC) BSORx Biotin sulfoxide reductase [c] : btnso + h + nadh --> btn + h2o + nad B3551 BSORy Biotin sulfoxide reductase [c] : btnso + h + nadph --> btn + h2o + nadp B3551 BTS4 Biotin synthase [c] : amet + dtbt + s --> btn + dad-5 + h + met-L B0775 (2.8.1.6-RXN) ((RIGHT REMOVE PROTON)) BUTCT Acetyl-CoA:butyrate-CoA transferase [c] : accoa + but --> ac + btcoa (B2221 AND B2222) (R11-RXN) (:METACYC) BUTSO3abcpp butanesulfonate transport via ABC system (periplasm) atp[c] + butso3[p] + h2o[c] --> adp[c] + butso3[c] + h[c] + pi[c] ((B0936 AND B0933 AND B0934) OR (B0365 AND B0366 AND B0367)) BUTSO3tex butanesulfonate transport via diffusion (extracellular to periplasm) butso3[e] <==> butso3[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) BUTt2rpp "Butyrate transport via proton symport, reversible (periplasm)" but[p] + h[p] <==> but[c] + h[c] B2223 BUTtex Butyrate transport via diffusion (extracellular to periplasm) but[e] <==> but[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CA2t3pp calcium (Ca+2) transport out via proton antiport (periplasm) ca2[c] + h[p] --> ca2[p] + h[c] B1216 (TRANS-RXN-144) CA2tex calcium (Ca+2) transport via diffusion (extracellular to periplasm) ca2[e] <==> ca2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CADVtpp Lysine/Cadaverine antiporter (periplasm) 15dap[c] + h[p] + lys-L[p] --> 15dap[p] + h[c] + lys-L[c] B4132 CAT catalase [c] : (2) h2o2 --> (2) h2o + o2 (B1732 OR B3942) (CATAL-RXN) CAt6pp calcium / sodium antiporter (1:1) ca2[c] + na1[p] <==> ca2[p] + na1[c] B3196 (TRANS-RXN-128) CBIAT Cobinamide adenyltransferase [c] : atp + cbi + h <==> adocbi + pppi B1270 CBItonex Cobinamide transport via ton system (extermal) cbi[e] + h[p] --> cbi[p] + h[c] (B3966 AND (B1252 AND B3005 AND B3006)) CBIuabcpp "Cobinamide transport via ABC system (uptake, periplasm)" atp[c] + cbi[p] + h2o[c] --> adp[c] + cbi[c] + h[c] + pi[c] (B1711 AND B1709 AND B0158) CBL1abcpp Cob(1)alamin transport via ABC system (periplasm) atp[c] + cbl1[p] + h2o[c] --> adp[c] + cbl1[c] + h[c] + pi[c] (B1711 AND B1709 AND B0158) (ABC-5-RXN) ((RIGHT REMOVE PROTON)) CBL1tonex Cob(1)alamin transport via ton system (extermal) cbl1[e] + h[p] --> cbl1[p] + h[c] (B3966 AND (B1252 AND B3005 AND B3006)) (RXN0-1565) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) CBLAT cob(I)alamin adenosyltransferase [c] : atp + cbl1 + h <==> adocbl + pppi B1270 CBMKr Carbamate kinase [c] : atp + co2 + nh4 <==> adp + cbp + (2) h (B0521 OR B0323 OR B2874) (CARBAMATE-KINASE-RXN) (:METACYC (LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT REMOVE PROTON)) CBPS carbamoyl-phosphate synthase (glutamine-hydrolysing) [c] : (2) atp + gln-L + h2o + hco3 --> (2) adp + cbp + glu-L + (2) h + pi (B0032 AND B0033) CD2abcpp Cadmium (Cd+2) ABC transporter (periplasm) atp[c] + cd2[c] + h2o[c] --> adp[c] + cd2[p] + h[c] + pi[c] B3469 CD2t3pp cadmium (Cd+2) transport out via proton antiport (periplasm) cd2[c] + h[p] --> cd2[p] + h[c] (B0752 OR B3915) CD2tex cadmium (Cd+2) transport via diffusion (extracellular to periplasm) cd2[e] <==> cd2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CD2tpp cadmium (+2) transport in via permease (no H+) cd2[p] --> cd2[c] B3040 CDAPPA120 CDP-Diacylglycerol pyrophostatase (n-C12:0) [c] : cdpdddecg + h2o --> cmp + (2) h + pa120 B3918 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA140 CDP-Diacylglycerol pyrophostatase (n-C14:0) [c] : cdpdtdecg + h2o --> cmp + (2) h + pa140 B3918 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA141 CDP-Diacylglycerol pyrophostatase (n-C14:1) [c] : cdpdtdec7eg + h2o --> cmp + (2) h + pa141 B3918 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA160 CDP-Diacylglycerol pyrophostatase (n-C16:0) [c] : cdpdhdecg + h2o --> cmp + (2) h + pa160 B3918 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA161 CDP-Diacylglycerol pyrophostatase (n-C16:1) [c] : cdpdhdec9eg + h2o --> cmp + (2) h + pa161 B3918 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA180 CDP-Diacylglycerol pyrophostatase (n-C18:0) [c] : cdpdodecg + h2o --> cmp + (2) h + pa180 B3918 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA181 CDP-Diacylglycerol pyrophostatase (n-C18:1) [c] : cdpdodec11eg + h2o --> cmp + (2) h + pa181 B3918 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDPMEK 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [c] : 4c2me + atp --> 2p4c2me + adp + h B1208 (2.7.1.148-RXN) ((RIGHT REMOVE PROTON)) CFAS160E "cyclopropane fatty acid synthase (Phosphatidylethanolamine, n-C16:0)" [c] : (2) amet + pe161 --> (2) ahcys + cpe160 + (2) h B1661 CFAS160G "cyclopropane fatty acid synthase (Phosphatidylglycerol, n-C16:0)" [c] : (2) amet + pg161 --> (2) ahcys + cpg160 + (2) h B1661 CFAS180E "cyclopropane fatty acid synthase (Phosphatidylethanolamine, n-C18:0)" [c] : (2) amet + pe181 --> (2) ahcys + cpe180 + (2) h B1661 CFAS180G "cyclopropane fatty acid synthase (Phosphatidylglycerol, n-C18:0)" [c] : (2) amet + pg181 --> (2) ahcys + cpg180 + (2) h B1661 CGLYabcpp L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm) atp[c] + cgly[p] + h2o[c] --> adp[c] + cgly[c] + h[c] + pi[c] (B3544 AND B3543 AND B3542 AND B3541 AND B3540) (:UNMAPPED-CPDS) CGLYtex L-Cysteinylglycine transport via diffusion (extracellular to periplasm) cgly[e] <==> cgly[p] (B0241 OR B0929 OR B1377 OR B2215) (:UNMAPPED-CPDS) CHLabcpp choline transport via ABC system (periplasm) atp[c] + chol[p] + h2o[c] --> adp[c] + chol[c] + h[c] + pi[c] (B2128 AND B2129 AND B2130 AND B2131) CHLt2pp choline transport via proton symport (periplasm) chol[p] + h[p] --> chol[c] + h[c] (B0314 OR B1801) (TRANS-RXN-99) CHLtex choline transport via diffusion (extracellular to periplasm) chol[e] <==> chol[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CHORM chorismate mutase [c] : chor --> pphn (B2599 OR B2600) (CHORISMATEMUT-RXN) CHORS chorismate synthase [c] : 3psme --> chor + pi B2329 (CHORISMATE-SYNTHASE-RXN) CHRPL Chorismate pyruvate lyase [c] : chor --> 4hbz + pyr B4039 (CHORPYRLY-RXN) CINNDO Cinnamate dioxygenase [c] : cinnm + h + nadh + o2 --> cenchddd + nad (B2538 AND B2539 AND B2540 AND B2542) CITL Citrate lyase [c] : cit --> ac + oaa ((B0615 AND B0616 AND B0617) AND B0614) (CITLY-RXN) CITt7pp Citrate transport via succinate antiport (periplasm) cit[p] + succ[c] --> cit[c] + succ[p] B0612 (TRANS-RXN-201) CITtex citrate transport via diffusion (extracellular to periplasm) cit[e] <==> cit[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CLIPAtex cold lipid A transport via vector (periplasm to extracellular) lipa_cold[p] --> lipa_cold[e] CLPNH120pp "cardiolipin hydrolase (periplasm, n-C12:0)" [p] : clpn120 + h2o --> h + pa120 + pg120 CLPNH140pp "cardiolipin hydrolase (periplasm, n-C14:0)" [p] : clpn140 + h2o --> h + pa140 + pg140 CLPNH141pp "cardiolipin hydrolase (periplasm, n-C14:1)" [p] : clpn141 + h2o --> h + pa141 + pg141 CLPNH160pp "cardiolipin hydrolase (periplasm, n-C16:0)" [p] : clpn160 + h2o --> h + pa160 + pg160 CLPNH161pp "cardiolipin hydrolase (periplasm, n-C16:1)" [p] : clpn161 + h2o --> h + pa161 + pg161 CLPNH180pp "cardiolipin hydrolase (periplasm, n-C18:0)" [p] : clpn180 + h2o --> h + pa180 + pg180 CLPNH181pp "cardiolipin hydrolase (periplasm, n-C18:1)" [p] : clpn181 + h2o --> h + pa181 + pg181 CLPNS120pp "cardiolipin synthase (periplasmic, n-C12:0)" [p] : (2) pg120 <==> clpn120 + glyc (B1249 OR B0789) CLPNS140pp "cardiolipin synthase (periplasmic, n-C14:0)" [p] : (2) pg140 <==> clpn140 + glyc (B1249 OR B0789) CLPNS141pp "cardiolipin synthase (periplasmic, n-C14:1)" [p] : (2) pg141 <==> clpn141 + glyc (B0789 OR B1249) CLPNS160pp "cardiolipin synthase (periplasmic, n-C16:0)" [p] : (2) pg160 <==> clpn160 + glyc (B0789 OR B1249) CLPNS161pp "cardiolipin synthase (periplasmic, n-C16:1)" [p] : (2) pg161 <==> clpn161 + glyc (B1249 OR B0789) CLPNS180pp "cardiolipin synthase (periplasmic, n-C18:0)" [p] : (2) pg180 <==> clpn180 + glyc (B1249 OR B0789) CLPNS181pp "cardiolipin synthase (periplasmic, n-C18:1)" [p] : (2) pg181 <==> clpn181 + glyc (B1249 OR B0789) CLt3_2pp chloride transport out via proton antiport (2:1) (periplasm) (2) cl[p] + h[c] --> (2) cl[c] + h[p] (B0155 OR B1592) (RXN0-2501) CLtex chloride (Cl-1) transport via diffusion (extracellular to periplasm) cl[e] <==> cl[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CMPN CMP nucleosidase [c] : cmp + h2o --> csn + r5p CMPtex CMP transport via diffusion (extracellular to periplasm) cmp[e] <==> cmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CO2tex CO2 transport via diffusion (extracellular to periplasm) co2[e] <==> co2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CO2tpp CO2 transporter via diffusion (periplasm) co2[p] <==> co2[c] (:DIFFUSION) (:INNER-MEMBRANE-DIFFUSION) COBALT2abcpp Cobalt (Co+2) ABC transporter (periplasm) atp[c] + cobalt2[c] + h2o[c] --> adp[c] + cobalt2[p] + h[c] + pi[c] B3469 COBALT2t3pp cobalt (Co+2) transport out via proton antiport (periplasm) cobalt2[c] + h[p] --> cobalt2[p] + h[c] (B3915 OR B0752) (TRANS-RXN-141A) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) COBALT2tex cobalt (Co+2) transport via diffusion (extracellular to periplasm) cobalt2[e] <==> cobalt2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) COBALT2tpp cobalt transport in via permease (no H+) cobalt2[p] --> cobalt2[c] (B3040 OR B3816) (TRANS-RXN-141A) COLIPAabcpp core oligosaccharide lipid A transport via ABC system (periplasm) atp[c] + colipa[c] + h2o[c] --> adp[c] + colipa[p] + h[c] + pi[c] B0914 COLIPAtex core oligosaccharide lipid A transport via vector (periplasm to extracellular) colipa[p] --> colipa[e] CPGNabcpp coprogen transport via ABC system (periplasm) atp[c] + cpgn[p] + h2o[c] --> adp[c] + cpgn[c] + h[c] + pi[c] (B0153 AND B0151 AND B0152) CPGNexs coprogen Fe-loading reaction (spontaneaous) [e] : cpgn-un + fe3 --> cpgn (:UNMAPPED-CPDS) CPGNR1 coprogen(Fe(III)) reductase [c] : (2) cpgn + fadh2 --> (2) cpgn-un + fad + (2) fe2 + (2) h (:UNMAPPED-CPDS) CPGNR2 coprogen(Fe(III)) reductase [c] : (2) cpgn + fmnh2 --> (2) cpgn-un + (2) fe2 + fmn + (2) h (:UNMAPPED-CPDS) CPGNR3 coprogen(Fe(III)) reductase [c] : (2) cpgn + rbflvrd --> (2) cpgn-un + (2) fe2 + (2) h + ribflv (:UNMAPPED-CPDS) CPGNtonex Coprogen transport via ton system (extracellular) cpgn[e] + h[p] --> cpgn[p] + h[c] (B1102 AND (B1252 AND B3005 AND B3006)) (RXN0-1702) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) CPGNUtex coprogen unloaded secretion (extracellular) cpgn-un[p] + h[p] --> cpgn-un[e] + h[c] (:UNMAPPED-CPDS) CPGNUtpp coprogen unloaded secretion cpgn-un[c] + h[p] --> cpgn-un[p] + h[c] (:UNMAPPED-CPDS) CPPPGO coproporphyrinogen oxidase (O2 required) [c] : cpppg3 + (2) h + o2 --> (2) co2 + (2) h2o + pppg9 B2436 (RXN0-1461) CPPPGO2 Oxygen Independent coproporphyrinogen-III oxidase [c] : (2) amet + cpppg3 --> (2) co2 + (2) dad-5 + (2) met-L + pppg9 B3867 (HEMN-RXN) CRNabcpp L-carnitine transport via ABC system (periplasm) atp[c] + crn[p] + h2o[c] --> adp[c] + crn[c] + h[c] + pi[c] (B2677 AND B2678 AND B2679) CRNBTCT gamma-butyrobetainyl-CoA: carnitine CoA transferase [c] : bbtcoa + crn <==> crncoa + gbbtn B0038 (RXN0-3601) CRNCAL2 Carnitine-CoA Ligase [c] : atp + coa + crn --> adp + crncoa + pi B0037 CRNCAR carnitine-CoA racemase [c] : crncoa <==> crnDcoa B0036 (CARNCOARACE-RXN) CRNCBCT crotonobetainyl-CoA: carnitine CoA transferase [c] : crn + ctbtcoa <==> crncoa + ctbt B0038 CRNCDH Carnityl-CoA dehydratse [c] : crncoa <==> ctbtcoa + h2o B0036 (RXN0-3561) CRNDabcpp D-carnitine transport via ABC system (periplasm) atp[c] + crn-D[p] + h2o[c] --> adp[c] + crn-D[c] + h[c] + pi[c] (B2677 AND B2678 AND B2679) CRNDCAL2 D-Carnitine-CoA Ligase [c] : atp + coa + crn-D --> adp + crnDcoa + pi B0037 CRNDt2rpp D-carnitine outward transport (H+ antiport) crn-D[p] + h[p] <==> crn-D[c] + h[c] B4111 CRNt2rpp L-carnitine outward transport (H+ antiport) crn[p] + h[p] <==> crn[c] + h[c] B4111 CRNt7pp Carnitine/butyrobetaine antiporter (periplasm) crn[p] + gbbtn[c] --> crn[c] + gbbtn[p] B0040 (TRANS-RXN-100) CRNt8pp L-carnitine/D-carnitine antiporter (periplasm) crn[p] + crn-D[c] --> crn[c] + crn-D[p] B0040 CRNtex L-carnitine transport via diffusion (extracellular to periplasm) crn[e] <==> crn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CS citrate synthase [c] : accoa + h2o + oaa --> cit + coa + h B0720 (CITSYN-RXN) ((RIGHT REMOVE PROTON)) CSND Cytosine deaminase [c] : csn + h + h2o --> nh4 + ura B0337 (CYTDEAM-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CSNt2pp cytosine transport in via proton symport (periplasm) csn[p] + h[p] --> csn[c] + h[c] B0336 (TRANS-RXN-116) CSNtex cytosine transport via diffusion (extracellular to periplasm) csn[e] <==> csn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CTBTabcpp crotonobetaine transport via ABC system (periplasm) atp[c] + ctbt[p] + h2o[c] --> adp[c] + ctbt[c] + h[c] + pi[c] (B2677 AND B2678 AND B2679) CTBTCAL2 Crotonobetaine-CoA Ligase [c] : atp + coa + ctbt --> adp + ctbtcoa + pi B0037 CTBTt2rpp cronobetaine outward transport (H+ antiport) ctbt[p] + h[p] <==> ctbt[c] + h[c] B4111 CTPS2 CTP synthase (glutamine) [c] : atp + gln-L + h2o + utp --> adp + ctp + glu-L + (2) h + pi B2780 CU1abcpp Copper (Cu +1) ABC transporter (periplasm) atp[c] + cu[c] + h2o[c] --> adp[c] + cu[p] + h[c] + pi[c] B0484 CU1Opp Cuprous Oxidase (Cu+1) [p] : (4) cu + (4) h + o2 --> (4) cu2 + (2) h2o B0123 CU2abcpp Copper (Cu+2) ABC transporter (periplasm) atp[c] + cu2[c] + h2o[c] --> adp[c] + cu2[p] + h[c] + pi[c] B3469 CU2tex copper (Cu+2) transport via diffusion (extracellular to periplasm) cu2[e] <==> cu2[p] (B2215 OR B0241 OR B0929 OR B1377) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CU2tpp copper transport in via permease (no H+) cu2[p] --> cu2[c] B3040 CUt3 copper transport out via proton antiport cu[c] + h[e] --> cu[e] + h[c] (B0572 AND B0573 AND B0574 AND B0575) CUtex copper (Cu+1) transport via diffusion (extracellular to periplasm) cu[e] <==> cu[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CYANST Cyanide sulfurtransferase [c] : cyan + tsul --> h + so3 + tcynt B3425 (THIOSULFATE-SULFURTRANSFERASE-RXN) ((RIGHT REMOVE PROTON)) CYANSTpp Cyanide sulfurtransferase (periplasmic) [p] : cyan + tsul --> h + so3 + tcynt B1308 CYANtex Cyanide transport via diffusion (extracellular to periplasm) cyan[e] <==> cyan[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CYNTAH Cyanate aminohydrolase [c] : cynt + (3) h + hco3 --> (2) co2 + nh4 B0340 CYNTt2pp Cyanate transport via proton symport (periplasm) cynt[p] + h[p] --> cynt[c] + h[c] B0341 (TRANS-RXN-14) CYNTtex Cyanate transport via diffusion (extracellular to periplasm) cynt[e] <==> cynt[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CYSabc2pp L-cysteine export via ABC system (cytoplasm to periplasm) atp[c] + cys-L[c] + h2o[c] --> adp[c] + cys-L[p] + h[c] + pi[c] (B0886 AND B0887) CYSabcpp L-cysteine uptake via ABC system (periplasm) atp[c] + cys-L[p] + h2o[c] --> adp[c] + cys-L[c] + h[c] + pi[c] CYSDabcpp D-cysteine uptake via ABC system (periplasm) atp[c] + cys-D[p] + h2o[c] --> adp[c] + cys-D[c] + h[c] + pi[c] CYSDDS D-cysteine desulfhydrase [c] : cys-D + h2o --> h2s + nh4 + pyr B1919 (DCYSDESULF-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CYSDS Cysteine Desulfhydrase [c] : cys-L + h2o --> h2s + nh4 + pyr (B3708 OR B3008) (LCYSDESULF-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CYSDtex D-cysteine transport via diffusion (extracellular to periplasm) cys-D[e] <==> cys-D[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CYSS cysteine synthase [c] : acser + h2s --> ac + cys-L + h (B2414 OR B2421) (ACSERLY-RXN) ((RIGHT REMOVE PROTON)) CYSSADS L-cysteine sulfinic acid desulfurase [c] : 3sala + (2) h --> ala-L + so2 B2810 (RXN0-279) ((LEFT REMOVE PROTON)) CYStex L-cysteine transport via diffusion (extracellular to periplasm) cys-L[e] <==> cys-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CYSTL cystathionine b-lyase [c] : cyst-L + h2o --> hcys-L + nh4 + pyr (B1622 OR B3008) (CYSTATHIONINE-BETA-LYASE-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CYStpp L-cysteine export via facilitated transport cys-L[c] --> cys-L[p] (B2578 OR B1533) (RXN0-1924) CYSTRS Cysteinyl-tRNA synthetase [c] : atp + cys-L + trnacys --> amp + cystrna + ppi B0526 (CYSTEINE--TRNA-LIGASE-RXN) CYTBD2pp cytochrome oxidase bd (menaquinol-8: 2 protons) (periplasm) (2) h[c] + mql8[c] + (0.5) o2[c] --> (2) h[p] + h2o[c] + mqn8[c] (B0978 AND B0979) CYTBDpp cytochrome oxidase bd (ubiquinol-8: 2 protons) (periplasm) (2) h[c] + (0.5) o2[c] + q8h2[c] --> (2) h[p] + h2o[c] + q8[c] ((B0978 AND B0979) OR (B0733 AND B0734)) (CYT-UBIQUINOL-OXID-RXN) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) CYTBO3_4pp cytochrome oxidase bo3 (ubiquinol-8: 4 protons) (periplasm) (4) h[c] + (0.5) o2[c] + q8h2[c] --> (4) h[p] + h2o[c] + q8[c] (B0429 AND B0430 AND B0431 AND B0432) (CYT-UBIQUINOL-OXID-RXN) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) CYTD cytidine deaminase [c] : cytd + h + h2o --> nh4 + uri B2143 (CYTIDEAM2-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CYTDH Cytidine hydrolase [c] : cytd + h2o --> csn + rib-D (B2162 OR B0651 OR B0030) (RXN0-361) CYTDK2 cytidine kinase (GTP) [c] : cytd + gtp --> cmp + gdp + h B2066 (CYTIDINEKIN-RXN) ((RIGHT REMOVE PROTON)) CYTDt2pp cytidine transport in via proton symport (periplasm) cytd[p] + h[p] --> cytd[c] + h[c] (B2393 OR B2964) (TRANS-RXN-108B) CYTDt2rpp "cytidine transport in via proton symport, reversible (periplasm)" cytd[p] + h[p] <==> cytd[c] + h[c] B2406 (TRANS-RXN-108B) CYTDtex cytidine transport via diffusion (extracellular to periplasm) cytd[e] <==> cytd[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) CYTK1 cytidylate kinase (CMP) [c] : atp + cmp <==> adp + cdp B0910 (CMPKI-RXN) CYTK2 cytidylate kinase (dCMP) [c] : atp + dcmp <==> adp + dcdp B0910 (RXN-7913) (:METACYC) DAAD D-Amino acid dehydrogenase [c] : ala-D + fad + h2o --> fadh2 + nh4 + pyr B1189 DADA Deoxyadenosine deaminase [c] : dad-2 + h + h2o --> din + nh4 B1623 (ADDALT-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DADK deoxyadenylate kinase [c] : atp + damp <==> adp + dadp B0474 (|(DEOXY)ADENYLATE-KINASE-RXN|) (:METACYC) DADNt2pp deoxyadenosine transport in via proton symport (periplasm) dad-2[p] + h[p] --> dad-2[c] + h[c] (B2393 OR B2964) (TRANS-RXN-108C) DADNtex deoxyadenosine transport via diffusion (extracellular to periplasm) dad-2[e] <==> dad-2[p] B0411 DAGK120 diacylglycerol kinase (n-C12:0) [c] : 12dgr120 + atp --> adp + h + pa120 B4042 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK140 diacylglycerol kinase (n-C14:0) [c] : 12dgr140 + atp --> adp + h + pa140 B4042 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK141 diacylglycerol kinase (n-C14:1) [c] : 12dgr141 + atp --> adp + h + pa141 B4042 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK160 diacylglycerol kinase (n-C16:0) [c] : 12dgr160 + atp --> adp + h + pa160 B4042 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK161 diacylglycerol kinase (n-C16:1) [c] : 12dgr161 + atp --> adp + h + pa161 B4042 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK180 diacylglycerol kinase (n-C18:0) [c] : 12dgr180 + atp --> adp + h + pa180 B4042 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK181 diacylglycerol kinase (n-C18:1) [c] : 12dgr181 + atp --> adp + h + pa181 B4042 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DALAt2pp D-alanine transport in via proton symport (periplasm) ala-D[p] + h[p] --> ala-D[c] + h[c] B4208 (TRANS-RXN-62A) DALAtex D-Alanine transport via diffusion (extracellular to periplasm) ala-D[e] <==> ala-D[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DAMPtex dAMP transport via diffusion (extracellular to periplasm) damp[e] <==> damp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DAPabcpp M-diaminopimelic acid ABC transport (periplasm) 26dap-M[p] + atp[c] + h2o[c] --> 26dap-M[c] + adp[c] + h[c] + pi[c] DAPAL "2,3-diaminopropionate amonnia lyase" [c] : 23dappa + h2o --> (2) nh4 + pyr B2871 (4.3.1.15-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DAPDC diaminopimelate decarboxylase [c] : 26dap-M + h --> co2 + lys-L B2838 (DIAMINOPIMDECARB-RXN) ((LEFT REMOVE PROTON)) DAPE diaminopimelate epimerase [c] : 26dap-LL <==> 26dap-M B3809 (DIAMINOPIMEPIM-RXN) DAPtex "1,5-Diaminopentane transport via diffusion (extracellular to periplasm)" 15dap[e] <==> 15dap[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DASYN120 CDP-diacylglycerol synthetase (n-C12:0) [c] : ctp + h + pa120 --> cdpdddecg + ppi B0175 (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN140 CDP-diacylglycerol synthetase (n-C14:0) [c] : ctp + h + pa140 --> cdpdtdecg + ppi B0175 (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN141 CDP-diacylglycerol synthetase (n-C14:1) [c] : ctp + h + pa141 --> cdpdtdec7eg + ppi B0175 (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN160 CDP-diacylglycerol synthetase (n-C16:0) [c] : ctp + h + pa160 --> cdpdhdecg + ppi B0175 (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN161 CDP-diacylglycerol synthetase (n-C16:1) [c] : ctp + h + pa161 --> cdpdhdec9eg + ppi B0175 (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN180 CDP-diacylglycerol synthetase (n-C18:0) [c] : ctp + h + pa180 --> cdpdodecg + ppi B0175 (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN181 CDP-diacylglycerol synthetase (n-C18:1) [c] : ctp + h + pa181 --> cdpdodec11eg + ppi B0175 (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DATPHs dATP spontanous amine hydrolysis [c] : datp + h + h2o --> ditp + nh4 DB4PS "3,4-Dihydroxy-2-butanone-4-phosphate synthase" [c] : ru5p-D --> db4p + for + h B3041 (DIOHBUTANONEPSYN-RXN) ((RIGHT REMOVE PROTON)) DBTS dethiobiotin synthase [c] : atp + co2 + dann --> adp + dtbt + (3) h + pi B0778 (DETHIOBIOTIN-SYN-RXN) ((RIGHT REMOVE PROTON)) DCAtex Decanoate transport via diffusion (extracellular to periplasm) dca[e] <==> dca[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DCMPtex dCMP transport via diffusion (extracellular to periplasm) dcmp[e] <==> dcmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DCTPD dCTP deaminase [c] : dctp + h + h2o --> dutp + nh4 B2065 (DCTP-DEAM-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DCYTD deoxycytidine deaminase [c] : dcyt + h + h2o --> duri + nh4 B2143 (CYTIDEAM-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DCYTt2pp deoxycytidine transport in via proton symport (periplasm) dcyt[p] + h[p] --> dcyt[c] + h[c] (B2393 OR B2964) (TRANS-RXN-108D) DCYTtex deoxycytidine transport via diffusion (extracellular to periplasm) dcyt[e] <==> dcyt[p] B0411 DDCAtexi Fatty acid (dodecanoate) transport via facilitated irreversible diffusion (extracellular to periplasm) ddca[e] --> ddca[p] B2344 (RXN0-1802) (:EXPANDED-RXN-MATCH) DDGALK 2-dehydro-3-deoxygalactonokinase [c] : 2dh3dgal + atp --> 2dh3dgal6p + adp + h B3693 (DEHYDDEOXGALACTKIN-RXN) ((RIGHT REMOVE PROTON)) DDGLCNt2rpp "2-dehydro-3-deoxy-D-gluconate transport via proton symport, reversible (periplasm)" 2ddglcn[p] + h[p] <==> 2ddglcn[c] + h[c] B3909 (TRANS-RXN-113) DDGLCNtex 2-dehydro-3-deoxy-D-gluconate transport via diffusion (extracellular to periplasm) 2ddglcn[e] <==> 2ddglcn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DDGLK 2-dehydro-3-deoxygluconokinase [c] : 2ddglcn + atp --> 2ddg6p + adp + h B3526 (DEOXYGLUCONOKIN-RXN) ((RIGHT REMOVE PROTON)) DDPA 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase [c] : e4p + h2o + pep --> 2dda7p + pi (B2601 OR B0754 OR B1704) (DAHPSYN-RXN) DDPGALA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [c] : 2dh3dgal6p <==> g3p + pyr B4477 (DEHYDDEOXPHOSGALACT-ALDOL-RXN) DGK1 deoxyguanylate kinase (dGMP:ATP) [c] : atp + dgmp <==> adp + dgdp B3648 (GMKALT-RXN) DGMPtex dGMP transport via diffusion (extracellular to periplasm) dgmp[e] <==> dgmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DGSNt2pp deoxyguanosine transport in via proton symport (periplasm) dgsn[p] + h[p] --> dgsn[c] + h[c] B2964 (TRANS-RXN-108) (:EXPANDED-RXN-MATCH) DGSNtex deoxyguanosine transport via diffusion (extracellular to periplasm) dgsn[e] <==> dgsn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DHAD1 "dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)" [c] : 23dhmb --> 3mob + h2o B3771 (DIHYDROXYISOVALDEHYDRAT-RXN) DHAD2 "Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)" [c] : 23dhmp --> 3mop + h2o B3771 (DIHYDROXYMETVALDEHYDRAT-RXN) DHAPT Dihydroxyacetone phosphotransferase [c] : dha + pep --> dhap + pyr (B1200 AND B1199 AND B1198 AND B2415 AND B2416) (2.7.1.121-RXN) DHAtex Dihydroxyacetone transport via diffusion (extracellular to periplasm) dha[e] <==> dha[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DHAtpp Dihydroxyacetone transport via facilitated diffusion (periplasm) dha[p] <==> dha[c] DHBD "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase" [c] : 23ddhb + nad <==> 23dhb + h + nadh B0596 (DHBDEHYD-RXN) ((RIGHT REMOVE PROTON)) DHBS "2,3-dihydroxybenzoate adenylate synthase" [c] : 23dhb + atp + h --> 23dhba + ppi B0594 (DHBAMPLIG-RXN) ((LEFT REMOVE PROTON)) DHBSH "2,3-dihydroxybenzoylserine hydrolase" [c] : 23dhbzs + h2o --> 23dhb + ser-L DHCIND "2,3-dihydroxycinnamate dehydrogenase" [c] : cenchddd + nad --> dhcinnm + h + nadh B2541 (:UNMAPPED-CPDS) DHCINDO "2,3-dihydroxycinnamate 1,2-dioxygenase" [c] : dhcinnm + o2 --> h + hkntd B0348 (:UNMAPPED-CPDS) DHDPRy dihydrodipicolinate reductase (NADPH) [c] : 23dhdp + h + nadph --> nadp + thdp B0031 (DIHYDROPICRED-RXN) (:EXPANDED-RXN-MATCH) DHDPS dihydrodipicolinate synthase [c] : aspsa + pyr --> 23dhdp + h + (2) h2o B2478 (DIHYDRODIPICSYN-RXN) ((RIGHT REMOVE PROTON)) DHFR dihydrofolate reductase [c] : dhf + h + nadph <==> nadp + thf (B1606 OR B0048) (DIHYDROFOLATEREDUCT-RXN) ((LEFT REMOVE PROTON)) DHFS dihydrofolate synthase [c] : atp + dhpt + glu-L --> adp + dhf + h + pi B2315 (DIHYDROFOLATESYNTH-RXN) ((RIGHT REMOVE PROTON)) DHNAOT4 "1,4-dihydroxy-2-naphthoate octaprenyltransferase" [c] : dhna + h + octdp --> 2dmmql8 + co2 + ppi B3930 (DMK-RXN) ((LEFT REMOVE PROTON)) DHNPA2 dihydroneopterin aldolase [c] : dhnpt --> 6hmhpt + gcald B3058 (H2NEOPTERINALDOL-RXN) DHORD2 dihydoorotic acid dehydrogenase (quinone8) [c] : dhor-S + q8 --> orot + q8h2 B0945 DHORD5 dihydroorotic acid (menaquinone-8) [c] : dhor-S + mqn8 --> mql8 + orot B0945 DHORTS dihydroorotase [c] : dhor-S + h2o <==> cbasp + h B1062 (DIHYDROOROT-RXN) ((RIGHT REMOVE PROTON)) DHPPD "2,3-dihydroxyphenylpropionate dehydrogenase" [c] : cechddd + nad --> dhpppn + h + nadh B2541 (PHENPRODIOLDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) DHPPDA2 diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp) [c] : 25drapp + h + h2o --> 5apru + nh4 B0414 (RIBOFLAVINSYNDEAM-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DHPS2 dihydropteroate synthase [c] : 4abz + 6hmhptpp --> dhpt + ppi B3177 (H2PTEROATESYNTH-RXN) DHPTDCs "4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)" [c] : dhptd --> h2o + hmfurn (:UNMAPPED-CPDS) DHPTPE dihydroneopterin triphosphate 2'-epimerase [c] : ahdt <==> dhmptp B2303 (H2NTPEPIM-RXN) DHQD 3-dehydroquinate dehydratase [c] : 3dhq <==> 3dhsk + h2o B1693 (3-DEHYDROQUINATE-DEHYDRATASE-RXN) DHQS 3-dehydroquinate synthase [c] : 2dda7p --> 3dhq + pi B3389 (3-DEHYDROQUINATE-SYNTHASE-RXN) DIMPtex dIMP transport via diffusion (extracellular to periplasm) dimp[e] <==> dimp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DINSt2pp deoxyinosine transport in via proton symport (periplasm) din[p] + h[p] --> din[c] + h[c] B2964 (TRANS-RXN-108E) DINStex deoxyinosine transport via diffusion (extracellular to periplasm) din[e] <==> din[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DKGLCNR1 "2,5-diketo-D-gluconate reductase" [c] : 25dkglcn + h + nadph --> 2dhguln + nadp (B3012 OR B0207) (1.1.1.274-RXN) ((LEFT REMOVE PROTON)) DKGLCNR2x "2,5-diketo-D-gluconate reductase (NADH)" [c] : 25dkglcn + h + nadh --> 5dglcn + nad B3553 DKGLCNR2y "2,5-diketo-D-gluconate reductase (NADPH)" [c] : 25dkglcn + h + nadph --> 5dglcn + nadp B3553 (YIAE1-RXN) ((LEFT REMOVE PROTON)) DKMPPD "2,3-diketo-5-methylthio-1-phosphopentane degradation reaction" [c] : dkmpp + h2o + o2 --> 2kmb + for + (2) h + pi DKMPPD3 "2,3-diketo-5-methylthio-1-phosphopentane degradation reaction" [c] : dkmpp + (3) h2o + (2) nad --> 2kmb + for + (4) h + (2) nadh + pi D-LACt2pp D-lactate transport via proton symport (periplasm) h[p] + lac-D[p] <==> h[c] + lac-D[c] (B3603 OR B2975) D-LACtex D-lactate transport via diffusion (extracellular to periplasm) lac-D[e] <==> lac-D[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DM_4HBA Sink needed to allow 4-hydroxy-benzoate to leave system [c] : 4hba --> (:EXCHANGE) DM_5DRIB Sink needed to allow 5'-deoxyribose to leave system [c] : 5drib --> (:EXCHANGE) DM_AACALD Sink needed to allow aminoacetaldehyde to leave system [c] : aacald --> (:EXCHANGE) DM_HMFURN Sink needed to allow 4-hydroxy-5-methyl-3(2H)-furanone to leave system [c] : hmfurn --> (:EXCHANGE) DM_OXAM Sink needed to allow oxamate to leave system [c] : oxam --> (:EXCHANGE) DMATT dimethylallyltranstransferase [c] : dmpp + ipdp --> grdp + ppi B0421 (GPPSYN-RXN) DMPPS 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp) [c] : h + h2mb4p + nadh --> dmpp + h2o + nad B0029 (RXN0-884) (:EXPANDED-RXN-MATCH) DMQMT 3-Dimethylubiquinonol 3-methyltransferase [c] : 2omhmbl + amet --> ahcys + h + q8h2 B2232 DMSOR1 Dimethyl sulfoxide reductase (Menaquinol 8) [c] : dmso + mql8 --> dms + h2o + mqn8 ((B1587 AND B1588 AND B1589 AND B1590) OR (B0894 AND B0895 AND B0896)) DMSOR1pp Dimethyl sulfoxide reductase (Menaquinol 8) (periplasm) dmso[p] + mql8[c] --> dms[p] + h2o[p] + mqn8[c] (B1872 AND B1873) DMSOR2 Dimethyl sulfoxide reductase (Demethylmenaquinol 8) [c] : 2dmmql8 + dmso --> 2dmmq8 + dms + h2o (B0894 AND B0895 AND B0896) DMSOR2pp Dimethyl sulfoxide reductase (Demethylmenaquinol 8) (periplasm) 2dmmql8[c] + dmso[p] --> 2dmmq8[c] + dms[p] + h2o[p] (B1872 AND B1873) DMSOtex Dimethyl sulfoxide transport via diffusion (extracellular to periplasm) dmso[e] <==> dmso[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DMStex Dimethyl sulfide transport via diffusion (extracellular to periplasm) dms[e] <==> dms[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DNMPPA Dihydroneopterin monophosphate dephosphorylase [c] : dhpmp + h2o --> dhnpt + pi (DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN) DNTPPA Dihydroneopterin triphosphate pyrophosphatase [c] : ahdt + h2o --> dhpmp + h + ppi (B1865 OR B0099) (H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN) ((RIGHT REMOVE PROTON)) DOGULNR "2,3 dioxo-L-gulonate reductase" [c] : 23doguln + h + nadh --> 3dhguln + nad B3575 (RXN0-703) ((LEFT REMOVE PROTON)) DOPAtex dopamine transport via diffusion (extracellular to periplasm) dopa[e] <==> dopa[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DPCOAK dephospho-CoA kinase [c] : atp + dpcoa --> adp + coa + h B0103 (DEPHOSPHOCOAKIN-RXN) ((RIGHT REMOVE PROTON)) DPR 2-dehydropantoate 2-reductase [c] : 2dhp + h + nadph --> nadp + pant-R (B0425 OR B3774) (2-DEHYDROPANTOATE-REDUCT-RXN) ((LEFT REMOVE PROTON)) DRPA deoxyribose-phosphate aldolase [c] : 2dr5p --> acald + g3p B4381 (DEOXYRIBOSE-P-ALD-RXN) DSBAO1 DsbA protein reoxidation reaction (aerobic) dsbard[p] + q8[c] --> dsbaox[p] + q8h2[c] (B3860 AND B1185) (:UNMAPPED-CPDS) DSBAO2 DsbA protein reoxidation reaction (anaerobic) dsbard[p] + mqn8[c] --> dsbaox[p] + mql8[c] (B3860 AND B1185) (:UNMAPPED-CPDS) DSBCGT DsbC:glutathione thiotransferase [p] : dsbcox + (2) gthrd --> dsbcrd + gthox B2893 (:UNMAPPED-CPDS) DSBDR DsbD reductase [c] : dsbdox + trdrd --> dsbdrd + trdox ((B4136 AND B2582) OR (B4136 AND B3781)) (:UNMAPPED-CPDS) DSBGGT DsbG:glutathione thiotransferase [p] : dsbgox + (2) gthrd --> dsbgrd + gthox B0604 (:UNMAPPED-CPDS) DSERDHr D-serine dehydrogenase [c] : nadp + ser-D <==> 2amsa + h + nadph B1539 DSERt2pp D-serine transport in via proton symport (periplasm) h[p] + ser-D[p] --> h[c] + ser-D[c] B4208 (RXN0-5130) DSERtex D-serine transport via diffusion (extracellular to periplasm) ser-D[e] <==> ser-D[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DTMPK dTMP kinase [c] : atp + dtmp <==> adp + dtdp B1098 (DTMPKI-RXN) DTMPtex dTMP transport via diffusion (extracellular to periplasm) dtmp[e] <==> dtmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DUMPtex dUMP transport via diffusion (extracellular to periplasm) dump[e] <==> dump[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) DURIK1 deoxyuridine kinase (ATP:Deoxyuridine) [c] : atp + duri --> adp + dump + h B1238 (DURIDKI-RXN) ((RIGHT REMOVE PROTON)) DURIPP deoxyuridine phosphorylase [c] : duri + pi <==> 2dr1p + ura (B4382 OR B4384) (URA-PHOSPH-RXN) DURIt2pp deoxyuridine transport in via proton symport (periplasm) duri[p] + h[p] --> duri[c] + h[c] (B2393 OR B2964) (TRANS-RXN-108F) DURItex deoxyuridine transport via diffusion (extracellular to periplasm) duri[e] <==> duri[p] B0411 DUTPDP dUTP diphosphatase [c] : dutp + h2o --> dump + h + ppi (B3640 OR B2251) (DUTP-PYROP-RXN) ((RIGHT REMOVE PROTON)) DXPRIi 1-deoxy-D-xylulose reductoisomerase [c] : dxyl5p + h + nadph --> 2me4p + nadp B0173 (DXPREDISOM-RXN) ((LEFT REMOVE PROTON)) DXPS 1-deoxy-D-xylulose 5-phosphate synthase [c] : g3p + h + pyr --> co2 + dxyl5p B0420 (DXS-RXN) ((LEFT REMOVE PROTON)) DXYLK 1-Deoxy-D-xylulose kinase [c] : atp + dxyl --> adp + dxyl5p + h B3564 (RXN0-382) ((RIGHT REMOVE PROTON)) E4PD Erythrose 4-phosphate dehydrogenase [c] : e4p + h2o + nad <==> 4per + (2) h + nadh B2927 (ERYTH4PDEHYDROG-RXN) EAR100x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C10:0) [c] : h + nadh + tdec2eACP --> dcaACP + nad B1288 (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR100y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C10:0) [c] : h + nadph + tdec2eACP --> dcaACP + nadp B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR120x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:0) [c] : h + nadh + tddec2eACP --> ddcaACP + nad B1288 (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR120y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:0) [c] : h + nadph + tddec2eACP --> ddcaACP + nadp B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR121x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:1) [c] : h + nadh + t3c5ddeceACP --> cddec5eACP + nad B1288 EAR121y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:1) [c] : h + nadph + t3c5ddeceACP --> cddec5eACP + nadp B1288 (RXN0-2145) ((LEFT REMOVE PROTON)) EAR140x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:0) [c] : h + nadh + tmrs2eACP --> myrsACP + nad B1288 (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR140y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:0) [c] : h + nadph + tmrs2eACP --> myrsACP + nadp B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR141x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:1) [c] : h + nadh + t3c7mrseACP --> nad + tdeACP B1288 (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR141y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:1) [c] : h + nadph + t3c7mrseACP --> nadp + tdeACP B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR160x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:0) [c] : h + nadh + tpalm2eACP --> nad + palmACP B1288 (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR160y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:0) [c] : h + nadph + tpalm2eACP --> nadp + palmACP B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR161x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:1) [c] : h + nadh + t3c9palmeACP --> hdeACP + nad B1288 (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR161y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:1) [c] : h + nadph + t3c9palmeACP --> hdeACP + nadp B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR180x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:0) [c] : h + nadh + toctd2eACP --> nad + ocdcaACP B1288 (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR180y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:0) [c] : h + nadph + toctd2eACP --> nadp + ocdcaACP B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR181x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:1) [c] : h + nadh + t3c11vaceACP --> nad + octeACP B1288 (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR181y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:1) [c] : h + nadph + t3c11vaceACP --> nadp + octeACP B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR40x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C4:0) [c] : but2eACP + h + nadh --> butACP + nad B1288 (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR40y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C4:0) [c] : but2eACP + h + nadph --> butACP + nadp B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR60x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C6:0) [c] : h + nadh + thex2eACP --> hexACP + nad B1288 (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR60y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C6:0) [c] : h + nadph + thex2eACP --> hexACP + nadp B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR80x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C8:0) [c] : h + nadh + toct2eACP --> nad + ocACP B1288 (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR80y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C8:0) [c] : h + nadph + toct2eACP --> nadp + ocACP B1288 (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) ECA4COLIPAtex enterobacterial common antigen (x4) core oligosaccharide lipid A transport (periplasm to extracellular) eca4colipa[p] --> eca4colipa[e] (:UNMAPPED-CPDS) ECA4OALpp enterobacterial common antigen (x4) O-antigen ligase (periplasm) [p] : colipa + eca4und --> eca4colipa + h + udcpdp B3622 (:UNMAPPED-CPDS) ECAP1pp enterobacterial common antigen polymerase (periplasm) [p] : (2) unagamuf --> eca2und + h + udcpdp (B3793 AND B3785) (:UNMAPPED-CPDS) ECAP2pp enterobacterial common antigen polymerase (periplasm) [p] : eca2und + unagamuf --> eca3und + h + udcpdp (B3793 AND B3785) (:UNMAPPED-CPDS) ECAP3pp enterobacterial common antigen polymerase (periplasm) [p] : eca3und + unagamuf --> eca4und + h + udcpdp (B3793 AND B3785) (:UNMAPPED-CPDS) ECAtpp "enterobacterial common antigen transferase (flippase, cytoplasm to periplasm)" unagamuf[c] --> unagamuf[p] B3792 ECOAH1 3-hydroxyacyl-CoA dehydratase (3-hydroxybutanoyl-CoA) [c] : 3hbcoa <==> b2coa + h2o (B3846 OR B2341) ECOAH2 3-hydroxyacyl-CoA dehydratase (3-hydroxyhexanoyl-CoA) [c] : 3hhcoa <==> h2o + hx2coa (B3846 OR B2341) ECOAH3 3-hydroxyacyl-CoA dehydratase (3-hydroxyoctanoyl-CoA) [c] : 3hocoa <==> h2o + oc2coa (B2341 OR B3846) (ENOYL-COA-HYDRAT-RXN) ECOAH4 3-hydroxyacyl-CoA dehydratase (3-hydroxydecanoyl-CoA) [c] : 3hdcoa <==> dc2coa + h2o (B3846 OR B2341) (ENOYL-COA-HYDRAT-RXN) (:EXPANDED-RXN-MATCH) ECOAH5 3-hydroxyacyl-CoA dehydratase (3-hydroxydodecanoyl-CoA) [c] : 3hddcoa <==> dd2coa + h2o (B3846 OR B2341) (ENOYL-COA-HYDRAT-RXN) (:METACYC :EXPANDED-RXN-MATCH) ECOAH6 3-hydroxyacyl-CoA dehydratase (3-hydroxytetradecanoyl-CoA) [c] : 3htdcoa <==> h2o + td2coa (B3846 OR B2341) (ENOYL-COA-HYDRAT-RXN) ECOAH7 3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA) [c] : 3hhdcoa <==> h2o + hdd2coa (B3846 OR B2341) (ENOYL-COA-HYDRAT-RXN) ECOAH8 3-hydroxyacyl-CoA dehydratase (3-hydroxyoctadecanoyl-CoA) [c] : 3hodcoa <==> h2o + od2coa (B3846 OR B2341) (ENOYL-COA-HYDRAT-RXN) EDA 2-dehydro-3-deoxy-phosphogluconate aldolase [c] : 2ddg6p --> g3p + pyr B1850 (KDPGALDOL-RXN) EDD 6-phosphogluconate dehydratase [c] : 6pgc --> 2ddg6p + h2o B1851 (PGLUCONDEHYDRAT-RXN) EDTXS1 Endotoxin Synthesis (lauroyl transferase) [c] : ddcaACP + kdo2lipid4 --> ACP + kdo2lipid4L B1054 (LAUROYLACYLTRAN-RXN) EDTXS2 Endotoxin Synthesis (myristoyl transferase) [c] : kdo2lipid4L + myrsACP --> ACP + lipa B1855 (MYRISTOYLACYLTRAN-RXN) EDTXS3 Endotoxin Synthesis (palmitoleoyl ACP) [c] : hdeACP + kdo2lipid4 --> ACP + kdo2lipid4p B2378 (PALMITOTRANS-RXN) EDTXS4 Endotoxin Synthesis (myristoyl transferase) [c] : kdo2lipid4p + myrsACP --> ACP + lipa_cold B1855 (MYRPALMTRAN-RXN) ENLIPAtex phosphoethanolamine lipid A transport via vector (periplasm to extracellular) enlipa[p] --> enlipa[e] ENO enolase [c] : 2pg <==> h2o + pep B2779 (2PGADEHYDRAT-RXN) ENTCS enterochelin synthase [c] : (3) 23dhba + (3) seramp --> (6) amp + enter + (9) h B0583 (ENTG-RXN) ((RIGHT REMOVE PROTON)) ENTERES Enterochelin Esterase [c] : enter + (3) h2o --> (3) 23dhbzs + (3) h B0585 (RXN0-1661) ((RIGHT REMOVE PROTON)) ENTERES2 Enterochelin Esterase (Fe containing) [c] : feenter + (3) h2o --> (3) 23dhbzs + fe3 + (3) h B0585 ETHAAL Ethanolamine ammonia-lyase [c] : etha --> acald + nh4 (B2440 AND B2441) (ETHAMLY-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ETHAt2pp ethanolamine transport in via proton symport etha[p] + h[p] --> etha[c] + h[c] ETHAtex ethanolamine transport via diffusion (extracellular) etha[e] <==> etha[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ETHSO3abcpp ethanesulfonate transport via ABC system (periplasm) atp[c] + ethso3[p] + h2o[c] --> adp[c] + ethso3[c] + h[c] + pi[c] (B0936 AND B0933 AND B0934) (ABC-64-RXN) ((RIGHT REMOVE PROTON)) ETHSO3tex ethanesulfonate transport via diffusion (extracellular to periplasm) ethso3[e] <==> ethso3[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ETOHt2rpp ethanol reversible transport via proton symport (periplasm) etoh[p] + h[p] <==> etoh[c] + h[c] ETOHtex ethanol transport via diffusion (extracellular to periplasm) etoh[e] <==> etoh[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) EX_12ppd-R(e) "(R)-Propane-1,2-diol exchange" [e] : 12ppd-R <==> (:EXCHANGE) EX_12ppd-S(e) "(S)-Propane-1,2-diol exchange" [e] : 12ppd-S <==> (:EXCHANGE) EX_14glucan(e) "1,4-alpha-D-glucan exchange" [e] : 14glucan <==> (:EXCHANGE) EX_15dap(e) "1,5-Diaminopentane exchange" [e] : 15dap <==> (:EXCHANGE) EX_23camp(e) "2',3'-Cyclic AMP exchange" [e] : 23camp <==> (:EXCHANGE) EX_23ccmp(e) "2',3'-Cyclic CMP exchange" [e] : 23ccmp <==> (:EXCHANGE) EX_23cgmp(e) "2',3'-Cyclic GMP exchange" [e] : 23cgmp <==> (:EXCHANGE) EX_23cump(e) "2',3'-Cyclic UMP exchange" [e] : 23cump <==> (:EXCHANGE) EX_23dappa(e) "2,3-diaminopropionate exchange" [e] : 23dappa <==> (:EXCHANGE) EX_26dap-M(e) "meso-2,6-Diaminoheptanedioate exchange" [e] : 26dap-M <==> (:EXCHANGE) EX_2ddglcn(e) 2-Dehydro-3-deoxy-D-gluconate exchange [e] : 2ddglcn <==> (:EXCHANGE) EX_34dhpac(e) "3,4-Dihydroxyphenylacetaldehyde exchange" [e] : 34dhpac <==> (:EXCHANGE) EX_3amp(e) 3'-AMP exchange [e] : 3amp <==> (:EXCHANGE) EX_3cmp(e) 3'-cmp exchange [e] : 3cmp <==> (:EXCHANGE) EX_3gmp(e) 3'-GMP exchange [e] : 3gmp <==> (:EXCHANGE) EX_3hcinnm(e) 3-hydroxycinnamic acid exchange [e] : 3hcinnm <==> (:EXCHANGE) EX_3hpppn(e) 3-(3-hydroxy-phenyl)propionate exchange [e] : 3hpppn <==> (:EXCHANGE) EX_3ump(e) 3'-UMP exchange [e] : 3ump <==> (:EXCHANGE) EX_4abut(e) 4-Aminobutanoate exchange [e] : 4abut <==> (:EXCHANGE) EX_4hoxpacd(e) 4-Hydroxyphenylacetaldehyde exchange [e] : 4hoxpacd <==> (:EXCHANGE) EX_5dglcn(e) 5-Dehydro-D-gluconate exchange [e] : 5dglcn <==> (:EXCHANGE) EX_ac(e) Acetate exchange [e] : ac <==> (:EXCHANGE) EX_acac(e) Acetoacetate exchange [e] : acac <==> (:EXCHANGE) EX_acald(e) Acetaldehyde exchange [e] : acald <==> (:EXCHANGE) EX_acgal(e) N-Acetyl-D-galactosamine exchange [e] : acgal <==> (:EXCHANGE) EX_acgal1p(e) N-Acetyl-D-galactosamine 1-phosphate exchange [e] : acgal1p <==> (:EXCHANGE) EX_acgam(e) N-Acetyl-D-glucosamine exchange [e] : acgam <==> (:EXCHANGE) EX_acgam1p(e) N-Acetyl-D-glucosamine 1-phosphate exchange [e] : acgam1p <==> (:EXCHANGE) EX_acmana(e) N-Acetyl-D-mannosamine exchange [e] : acmana <==> (:EXCHANGE) EX_acmum(e) N-Acetylmuramate exchange [e] : acmum <==> (:EXCHANGE) EX_acnam(e) N-Acetylneuraminate exchange [e] : acnam <==> (:EXCHANGE) EX_acolipa(e) 4-Amino-4-deoxy-L-arabinose modified core oligosaccharide lipid A exchange [e] : acolipa <==> (:EXCHANGE) EX_acser(e) O-Acetyl-L-serine exchange [e] : acser <==> (:EXCHANGE) EX_ade(e) Adenine exchange [e] : ade <==> (:EXCHANGE) EX_adn(e) Adenosine exchange [e] : adn <==> (:EXCHANGE) EX_adocbl(e) Adenosylcobalamin exchange [e] : adocbl <==> (:EXCHANGE) EX_ag(e) silver exchange [e] : ag <==> (:EXCHANGE) EX_agm(e) Agmatine exchange [e] : agm <==> (:EXCHANGE) EX_akg(e) 2-Oxoglutarate exchange [e] : akg <==> (:EXCHANGE) EX_alaala(e) D-Alanyl-D-alanine exchange [e] : alaala <==> (:EXCHANGE) EX_ala-B(e) beta-Alanine exchange [e] : ala-B <==> (:EXCHANGE) EX_ala-D(e) D-Alanine exchange [e] : ala-D <==> (:EXCHANGE) EX_ala-L(e) L-Alanine exchange [e] : ala-L <==> (:EXCHANGE) EX_all-D(e) D-Allose exchange [e] : all-D <==> (:EXCHANGE) EX_alltn(e) Allantoin exchange [e] : alltn <==> (:EXCHANGE) EX_amp(e) AMP exchange [e] : amp <==> (:EXCHANGE) EX_anhgm(e) N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid exchange [e] : anhgm <==> (:EXCHANGE) EX_arab-L(e) L-Arabinose exchange [e] : arab-L <==> (:EXCHANGE) EX_arbtn(e) aerobactin minus Fe3 exchange [e] : arbtn <==> (:EXCHANGE) EX_arbtn-fe3(e) Aerobactin exchange [e] : arbtn-fe3 <==> (:EXCHANGE) EX_arg-L(e) L-Arginine exchange [e] : arg-L <==> (:EXCHANGE) EX_ascb-L(e) L-Ascorbate exchange [e] : ascb-L <==> (:EXCHANGE) EX_asn-L(e) L-Asparagine exchange [e] : asn-L <==> (:EXCHANGE) EX_aso3(e) arsenite exchange [e] : aso3 <==> (:EXCHANGE) EX_asp-L(e) L-Aspartate exchange [e] : asp-L <==> (:EXCHANGE) EX_but(e) Butyrate (n-C4:0) exchange [e] : but <==> (:EXCHANGE) EX_butso3(e) butanesulfonate exchange [e] : butso3 <==> (:EXCHANGE) EX_ca2(e) Calcium exchange [e] : ca2 <==> (:EXCHANGE) EX_cbi(e) Cobinamide exchange [e] : cbi <==> (:EXCHANGE) EX_cbl1(e) Cob(I)alamin exchange [e] : cbl1 <==> (:EXCHANGE) EX_cd2(e) Cadmium exchange [e] : cd2 <==> (:EXCHANGE) EX_cgly(e) Cys-Gly exchange [e] : cgly <==> (:EXCHANGE) EX_chol(e) Choline exchange [e] : chol <==> (:EXCHANGE) EX_cit(e) Citrate exchange [e] : cit <==> (:EXCHANGE) EX_cl(e) Chloride exchange [e] : cl <==> (:EXCHANGE) EX_cmp(e) CMP exchange [e] : cmp <==> (:EXCHANGE) EX_co2(e) CO2 exchange [e] : co2 <==> (:EXCHANGE) EX_cobalt2(e) Co2+ exchange [e] : cobalt2 <==> (:EXCHANGE) EX_colipa(e) core oligosaccharide lipid A exchange [e] : colipa <==> (:EXCHANGE) EX_cpgn(e) coprogen exchange [e] : cpgn <==> (:EXCHANGE) EX_cpgn-un(e) coprogen unloaded (no Fe(III)) exchange [e] : cpgn-un <==> (:EXCHANGE) EX_crn(e) L-Carnitine exchange [e] : crn <==> (:EXCHANGE) EX_csn(e) Cytosine exchange [e] : csn <==> (:EXCHANGE) EX_cu(e) Cu+ exchange [e] : cu <==> (:EXCHANGE) EX_cu2(e) Cu2+ exchange [e] : cu2 <==> (:EXCHANGE) EX_cyan(e) Hydrogen cyanide exchange [e] : cyan <==> (:EXCHANGE) EX_cynt(e) Cyanate exchange [e] : cynt <==> (:EXCHANGE) EX_cys-D(e) D-Cysteine exchange [e] : cys-D <==> (:EXCHANGE) EX_cys-L(e) L-Cysteine exchange [e] : cys-L <==> (:EXCHANGE) EX_cytd(e) Cytidine exchange [e] : cytd <==> (:EXCHANGE) EX_dad-2(e) Deoxyadenosine exchange [e] : dad-2 <==> (:EXCHANGE) EX_damp(e) dAMP exchange [e] : damp <==> (:EXCHANGE) EX_dca(e) Decanoate (n-C10:0) exchange [e] : dca <==> (:EXCHANGE) EX_dcmp(e) dCMP exchange [e] : dcmp <==> (:EXCHANGE) EX_dcyt(e) Deoxycytidine exchange [e] : dcyt <==> (:EXCHANGE) EX_ddca(e) Dodecanoate (n-C12:0) exchange [e] : ddca <==> (:EXCHANGE) EX_dgmp(e) dGMP exchange [e] : dgmp <==> (:EXCHANGE) EX_dgsn(e) Deoxyguanosine exchange [e] : dgsn <==> (:EXCHANGE) EX_dha(e) Dihydroxyacetone exchange [e] : dha <==> (:EXCHANGE) EX_dimp(e) dIMP exchange [e] : dimp <==> (:EXCHANGE) EX_din(e) Deoxyinosine exchange [e] : din <==> (:EXCHANGE) EX_dms(e) Dimethyl sulfide exchange [e] : dms <==> (:EXCHANGE) EX_dmso(e) Dimethyl sulfoxide exchange [e] : dmso <==> (:EXCHANGE) EX_dopa(e) Dopamine exchange [e] : dopa <==> (:EXCHANGE) EX_dtmp(e) dTMP exchange [e] : dtmp <==> (:EXCHANGE) EX_dump(e) dUMP exchange [e] : dump <==> (:EXCHANGE) EX_duri(e) Deoxyuridine exchange [e] : duri <==> (:EXCHANGE) EX_eca4colipa(e) (enterobacterial common antigen)x4 core oligosaccharide lipid A exchange [e] : eca4colipa <==> (:EXCHANGE) EX_enlipa(e) phosphoethanolamine KDO(2)-lipid (A) exchange [e] : enlipa <==> (:EXCHANGE) EX_enter(e) Enterochelin exchange [e] : enter <==> (:EXCHANGE) EX_etha(e) Ethanolamine exchange [e] : etha <==> (:EXCHANGE) EX_ethso3(e) ethanesulfonate exchange [e] : ethso3 <==> (:EXCHANGE) EX_etoh(e) Ethanol exchange [e] : etoh <==> (:EXCHANGE) EX_f6p(e) D-fructose 6-phosphate exchange [e] : f6p <==> (:EXCHANGE) EX_fald(e) Formaldehyde exchange [e] : fald <==> (:EXCHANGE) EX_fe2(e) Fe2+ exchange [e] : fe2 <==> (:EXCHANGE) EX_fe3(e) Fe3+ exchange [e] : fe3 <==> (:EXCHANGE) EX_fe3dcit(e) Fe(III)dicitrate exchange [e] : fe3dcit <==> (:EXCHANGE) EX_fe3dhbzs(e) "ferric 2,3-dihydroxybenzoylserine exchange" [e] : fe3dhbzs <==> (:EXCHANGE) EX_fe3hox(e) Fe(III)hydroxamate exchange [e] : fe3hox <==> (:EXCHANGE) EX_fe3hox-un(e) "Fe(III)hydoxamate, unloaded exchange" [e] : fe3hox-un <==> (:EXCHANGE) EX_fecrm(e) Ferrichrome exchange [e] : fecrm <==> (:EXCHANGE) EX_fecrm-un(e) Ferrichrome minus Fe(III) exchange [e] : fecrm-un <==> (:EXCHANGE) EX_feenter(e) Fe-enterobactin exchange [e] : feenter <==> (:EXCHANGE) EX_feoxam(e) ferroxamine exchange [e] : feoxam <==> (:EXCHANGE) EX_feoxam-un(e) ferroxamine minus Fe(3) exchange [e] : feoxam-un <==> (:EXCHANGE) EX_for(e) Formate exchange [e] : for <==> (:EXCHANGE) EX_fru(e) D-Fructose exchange [e] : fru <==> (:EXCHANGE) EX_frulys(e) fructoselysine exchange [e] : frulys <==> (:EXCHANGE) EX_fruur(e) D-Fructuronate exchange [e] : fruur <==> (:EXCHANGE) EX_fuc-L(e) L-Fucose exchange [e] : fuc-L <==> (:EXCHANGE) EX_fum(e) Fumarate exchange [e] : fum <==> (:EXCHANGE) EX_g1p(e) D-Glucose 1-phosphate exchange [e] : g1p <==> (:EXCHANGE) EX_g3pc(e) sn-Glycero-3-phosphocholine exchange [e] : g3pc <==> (:EXCHANGE) EX_g3pe(e) sn-Glycero-3-phosphoethanolamine exchange [e] : g3pe <==> (:EXCHANGE) EX_g3pg(e) Glycerophosphoglycerol exchange [e] : g3pg <==> (:EXCHANGE) EX_g3pi(e) sn-Glycero-3-phospho-1-inositol exchange [e] : g3pi <==> (:EXCHANGE) EX_g3ps(e) Glycerophosphoserine exchange [e] : g3ps <==> (:EXCHANGE) EX_g6p(e) D-Glucose 6-phosphate exchange [e] : g6p <==> (:EXCHANGE) EX_gal(e) D-Galactose exchange [e] : gal <==> (:EXCHANGE) EX_gal1p(e) alpha-D-Galactose 1-phosphate exchange [e] : gal1p <==> (:EXCHANGE) EX_gal-bD(e) beta D-Galactose exchange [e] : gal-bD <==> (:EXCHANGE) EX_galct-D(e) D-Galactarate exchange [e] : galct-D <==> (:EXCHANGE) EX_galctn-D(e) D-Galactonate exchange [e] : galctn-D <==> (:EXCHANGE) EX_galctn-L(e) L-Galactonate exchange [e] : galctn-L <==> (:EXCHANGE) EX_galt(e) Galactitol exchange [e] : galt <==> (:EXCHANGE) EX_galur(e) D-Galacturonate exchange [e] : galur <==> (:EXCHANGE) EX_gam(e) D-Glucosamine exchange [e] : gam <==> (:EXCHANGE) EX_gam6p(e) D-Glucosamine 6-phosphate exchange [e] : gam6p <==> (:EXCHANGE) EX_gbbtn(e) gamma-butyrobetaine exchange [e] : gbbtn <==> (:EXCHANGE) EX_gdp(e) GDP exchange [e] : gdp <==> (:EXCHANGE) EX_glc(e) D-Glucose exchange [e] : glc-D <==> (:EXCHANGE) EX_glcn(e) D-Gluconate exchange [e] : glcn <==> (:EXCHANGE) EX_glcr(e) D-Glucarate exchange [e] : glcr <==> (:EXCHANGE) EX_glcur(e) D-Glucuronate exchange [e] : glcur <==> (:EXCHANGE) EX_glcur1p(e) D-Glucuronate 1-phosphate exchange [e] : glcur1p <==> (:EXCHANGE) EX_gln-L(e) L-Glutamine exchange [e] : gln-L <==> (:EXCHANGE) EX_glu-L(e) L-Glutamate exchange [e] : glu-L <==> (:EXCHANGE) EX_gly(e) Glycine exchange [e] : gly <==> (:EXCHANGE) EX_glyald(e) D-Glyceraldehyde exchange [e] : glyald <==> (:EXCHANGE) EX_glyb(e) Glycine betaine exchange [e] : glyb <==> (:EXCHANGE) EX_glyc(e) Glycerol exchange [e] : glyc <==> (:EXCHANGE) EX_glyc2p(e) Glycerol 2-phosphate exchange [e] : glyc2p <==> (:EXCHANGE) EX_glyc3p(e) Glycerol 3-phosphate exchange [e] : glyc3p <==> (:EXCHANGE) EX_glyclt(e) Glycolate exchange [e] : glyclt <==> (:EXCHANGE) EX_glyc-R(e) (R)-Glycerate exchange [e] : glyc-R <==> (:EXCHANGE) EX_gmp(e) GMP exchange [e] : gmp <==> (:EXCHANGE) EX_gsn(e) Guanosine exchange [e] : gsn <==> (:EXCHANGE) EX_gthox(e) Oxidized glutathione exchange [e] : gthox <==> (:EXCHANGE) EX_gthrd(e) Reduced glutathione exchange [e] : gthrd <==> (:EXCHANGE) EX_gtp(e) GTP exchange [e] : gtp <==> (:EXCHANGE) EX_gua(e) Guanine exchange [e] : gua <==> (:EXCHANGE) EX_h(e) H+ exchange [e] : h <==> (:EXCHANGE) EX_h2(e) H2 exchange [e] : h2 <==> (:EXCHANGE) EX_h2o(e) H2O exchange [e] : h2o <==> (:EXCHANGE) EX_h2o2(e) Hydrogen peroxide exchange [e] : h2o2 <==> (:EXCHANGE) EX_h2s(e) Hydrogen sulfide exchange [e] : h2s <==> (:EXCHANGE) EX_hacolipa(e) hepta-acylated core oligosaccharide lipid A (E. coli) exchange [e] : hacolipa <==> (:EXCHANGE) EX_halipa(e) hepta-acylated KDO(2)-lipid (A) exchange [e] : halipa <==> (:EXCHANGE) EX_hdca(e) Hexadecanoate (n-C16:0) exchange [e] : hdca <==> (:EXCHANGE) EX_hdcea(e) hexadecenoate (n-C16:1) exchange [e] : hdcea <==> (:EXCHANGE) EX_hg2(e) Hg2+ exchange [e] : hg2 <==> (:EXCHANGE) EX_his-L(e) L-Histidine exchange [e] : his-L <==> (:EXCHANGE) EX_hom-L(e) L-Homoserine exchange [e] : hom-L <==> (:EXCHANGE) EX_hxa(e) Hexanoate (n-C6:0) exchange [e] : hxa <==> (:EXCHANGE) EX_hxan(e) Hypoxanthine exchange [e] : hxan <==> (:EXCHANGE) EX_idon-L(e) L-Idonate exchange [e] : idon-L <==> (:EXCHANGE) EX_ile-L(e) L-Isoleucine exchange [e] : ile-L <==> (:EXCHANGE) EX_imp(e) IMP exchange [e] : imp <==> (:EXCHANGE) EX_indole(e) Indole exchange [e] : indole <==> (:EXCHANGE) EX_inost(e) myo-Inositol exchange [e] : inost <==> (:EXCHANGE) EX_ins(e) Inosine exchange [e] : ins <==> (:EXCHANGE) EX_isetac(e) Isethionic acid exchange [e] : isetac <==> (:EXCHANGE) EX_k(e) K+ exchange [e] : k <==> (:EXCHANGE) EX_kdo2lipid4(e) KDO(2)-lipid IV(A) exchange [e] : kdo2lipid4 <==> (:EXCHANGE) EX_lac-D(e) D-lactate exchange [e] : lac-D <==> (:EXCHANGE) EX_lac-L(e) L-Lactate exchange [e] : lac-L <==> (:EXCHANGE) EX_LalaDgluMdap(e) "L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate exchange" [e] : LalaDgluMdap <==> (:EXCHANGE) EX_LalaDgluMdapDala(e) "L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine exchange" [e] : LalaDgluMdapDala <==> (:EXCHANGE) EX_lcts(e) Lactose exchange [e] : lcts <==> (:EXCHANGE) EX_leu-L(e) L-Leucine exchange [e] : leu-L <==> (:EXCHANGE) EX_lipa(e) KDO(2)-lipid (A) exchange [e] : lipa <==> (:EXCHANGE) EX_lipa_cold(e) cold adapted KDO(2)-lipid (A) exchange [e] : lipa_cold <==> (:EXCHANGE) EX_lys-L(e) L-Lysine exchange [e] : lys-L <==> (:EXCHANGE) EX_lyx-L(e) L-Lyxose exchange [e] : lyx-L <==> (:EXCHANGE) EX_mal-D(e) D-Malate exchange [e] : mal-D <==> (:EXCHANGE) EX_mal-L(e) L-Malate exchange [e] : mal-L <==> (:EXCHANGE) EX_malt(e) Maltose exchange [e] : malt <==> (:EXCHANGE) EX_malthx(e) Maltohexaose exchange [e] : malthx <==> (:EXCHANGE) EX_maltpt(e) Maltopentaose exchange [e] : maltpt <==> (:EXCHANGE) EX_malttr(e) Maltotriose exchange [e] : malttr <==> (:EXCHANGE) EX_maltttr(e) Maltotetraose exchange [e] : maltttr <==> (:EXCHANGE) EX_man(e) D-Mannose exchange [e] : man <==> (:EXCHANGE) EX_man6p(e) D-Mannose 6-phosphate exchange [e] : man6p <==> (:EXCHANGE) EX_manglyc(e) 2(alpha-D-Mannosyl)-D-glycerate exchange [e] : manglyc <==> (:EXCHANGE) EX_melib(e) Melibiose exchange [e] : melib <==> (:EXCHANGE) EX_met-D(e) D-Methionine exchange [e] : met-D <==> (:EXCHANGE) EX_met-L(e) L-Methionine exchange [e] : met-L <==> (:EXCHANGE) EX_metsox-R-L(e) L-methionine-R-sulfoxide exchange [e] : metsox-R-L <==> (:EXCHANGE) EX_metsox-S-L(e) L-Methionine S-oxide exchange [e] : metsox-S-L <==> (:EXCHANGE) EX_mg2(e) Mg exchange [e] : mg2 <==> (:EXCHANGE) EX_minohp(e) myo-Inositol hexakisphosphate exchange [e] : minohp <==> (:EXCHANGE) EX_mmet(e) S-Methyl-L-methionine exchange [e] : mmet <==> (:EXCHANGE) EX_mn2(e) Mn2+ exchange [e] : mn2 <==> (:EXCHANGE) EX_mnl(e) D-Mannitol exchange [e] : mnl <==> (:EXCHANGE) EX_mobd(e) Molybdate exchange [e] : mobd <==> (:EXCHANGE) EX_mso3(e) methanesulfonate exchange [e] : mso3 <==> (:EXCHANGE) EX_n2o(e) Nitrous oxide exchange [e] : n2o <==> (:EXCHANGE) EX_na1(e) Sodium exchange [e] : na1 <==> (:EXCHANGE) EX_nac(e) Nicotinate exchange [e] : nac <==> (:EXCHANGE) EX_nh4(e) Ammonia exchange [e] : nh4 <==> (:EXCHANGE) EX_ni2(e) Ni2+ exchange [e] : ni2 <==> (:EXCHANGE) EX_nmn(e) NMN exchange [e] : nmn <==> (:EXCHANGE) EX_no(e) Nitric oxide exchange [e] : no <==> (:EXCHANGE) EX_no2(e) Nitrite exchange [e] : no2 <==> (:EXCHANGE) EX_no3(e) Nitrate exchange [e] : no3 <==> (:EXCHANGE) EX_o16a4colipa(e) (O16 antigen)x4 core oligosaccharide lipid A exchange [e] : o16a4colipa <==> (:EXCHANGE) EX_o2(e) O2 exchange [e] : o2 <==> (:EXCHANGE) EX_o2s(e) Superoxide anion exchange [e] : o2s <==> (:EXCHANGE) EX_ocdca(e) octadecanoate (n-C18:0) exchange [e] : ocdca <==> (:EXCHANGE) EX_ocdcea(e) octadecenoate (n-C18:1) exchange [e] : ocdcea <==> (:EXCHANGE) EX_octa(e) octanoate (n-C8:0) exchange [e] : octa <==> (:EXCHANGE) EX_orn(e) Ornithine exchange [e] : orn <==> (:EXCHANGE) EX_orot(e) Orotate exchange [e] : orot <==> (:EXCHANGE) EX_pacald(e) Phenylacetaldehyde exchange [e] : pacald <==> (:EXCHANGE) EX_peamn(e) Phenethylamine exchange [e] : peamn <==> (:EXCHANGE) EX_phe-L(e) L-Phenylalanine exchange [e] : phe-L <==> (:EXCHANGE) EX_pheme(e) Protoheme exchange [e] : pheme <==> (:EXCHANGE) EX_pi(e) Phosphate exchange [e] : pi <==> (:EXCHANGE) EX_pnto-R(e) (R)-Pantothenate exchange [e] : pnto-R <==> (:EXCHANGE) EX_ppa(e) Propionate exchange [e] : ppa <==> (:EXCHANGE) EX_ppal(e) Propanal exchange [e] : ppal <==> (:EXCHANGE) EX_pppn(e) Phenylpropanoate exchange [e] : pppn <==> (:EXCHANGE) EX_ppt(e) Phosphonate exchange [e] : ppt <==> (:EXCHANGE) EX_progly(e) L-Prolinylglycine exchange [e] : progly <==> (:EXCHANGE) EX_pro-L(e) L-Proline exchange [e] : pro-L <==> (:EXCHANGE) EX_psclys(e) psicoselysine exchange [e] : psclys <==> (:EXCHANGE) EX_pser-L(e) O-Phospho-L-serine exchange [e] : pser-L <==> (:EXCHANGE) EX_ptrc(e) Putrescine exchange [e] : ptrc <==> (:EXCHANGE) EX_pyr(e) Pyruvate exchange [e] : pyr <==> (:EXCHANGE) EX_r5p(e) alpha-D-Ribose 5-phosphate exchange [e] : r5p <==> (:EXCHANGE) EX_rib-D(e) D-Ribose exchange [e] : rib-D <==> (:EXCHANGE) EX_rmn(e) L-Rhamnose exchange [e] : rmn <==> (:EXCHANGE) EX_sbt-D(e) D-Sorbitol exchange [e] : sbt-D <==> (:EXCHANGE) EX_ser-D(e) D-Serine exchange [e] : ser-D <==> (:EXCHANGE) EX_ser-L(e) L-Serine exchange [e] : ser-L <==> (:EXCHANGE) EX_skm(e) Shikimate exchange [e] : skm <==> (:EXCHANGE) EX_so2(e) sulfur dioxide exchange [e] : so2 <==> (:EXCHANGE) EX_so3(e) Sulfite exchange [e] : so3 <==> (:EXCHANGE) EX_so4(e) Sulfate exchange [e] : so4 <==> (:EXCHANGE) EX_spmd(e) Spermidine exchange [e] : spmd <==> (:EXCHANGE) EX_succ(e) Succinate exchange [e] : succ <==> (:EXCHANGE) EX_sucr(e) Sucrose exchange [e] : sucr <==> (:EXCHANGE) EX_sulfac(e) sulfoacetate exchange [e] : sulfac <==> (:EXCHANGE) EX_tartr-L(e) L-tartrate exchange [e] : tartr-L <==> (:EXCHANGE) EX_taur(e) Taurine exchange [e] : taur <==> (:EXCHANGE) EX_tcynt(e) Thiocyanate exchange [e] : tcynt <==> (:EXCHANGE) EX_thm(e) Thiamin exchange [e] : thm <==> (:EXCHANGE) EX_thr-L(e) L-Threonine exchange [e] : thr-L <==> (:EXCHANGE) EX_thrp(e) L-Threonine O-3-phosphate exchange [e] : thrp <==> (:EXCHANGE) EX_thym(e) Thymine exchange [e] : thym <==> (:EXCHANGE) EX_thymd(e) Thymidine exchange [e] : thymd <==> (:EXCHANGE) EX_tma(e) Trimethylamine exchange [e] : tma <==> (:EXCHANGE) EX_tmao(e) Trimethylamine N-oxide exchange [e] : tmao <==> (:EXCHANGE) EX_tre(e) Trehalose exchange [e] : tre <==> (:EXCHANGE) EX_trp-L(e) L-Tryptophan exchange [e] : trp-L <==> (:EXCHANGE) EX_tsul(e) Thiosulfate exchange [e] : tsul <==> (:EXCHANGE) EX_ttdca(e) tetradecanoate (n-C14:0) exchange [e] : ttdca <==> (:EXCHANGE) EX_ttdcea(e) tetradecenoate (n-C14:1) exchange [e] : ttdcea <==> (:EXCHANGE) EX_tungs(e) tungstate exchange [e] : tungs <==> (:EXCHANGE) EX_tym(e) Tyramine exchange [e] : tym <==> (:EXCHANGE) EX_tyr-L(e) L-Tyrosine exchange [e] : tyr-L <==> (:EXCHANGE) EX_tyrp(e) Phosphotyrosine exchange [e] : tyrp <==> (:EXCHANGE) EX_uacgam(e) UDP-N-acetyl-D-glucosamine exchange [e] : uacgam <==> (:EXCHANGE) EX_udpacgal(e) UDP-N-acetyl-D-galactosamine exchange [e] : udpacgal <==> (:EXCHANGE) EX_udpg(e) UDPglucose exchange [e] : udpg <==> (:EXCHANGE) EX_udpgal(e) UDPgalactose exchange [e] : udpgal <==> (:EXCHANGE) EX_udpglcur(e) UDP-D-glucuronate exchange [e] : udpglcur <==> (:EXCHANGE) EX_ump(e) UMP exchange [e] : ump <==> (:EXCHANGE) EX_ura(e) Uracil exchange [e] : ura <==> (:EXCHANGE) EX_urea(e) Urea exchange [e] : urea <==> (:EXCHANGE) EX_uri(e) Uridine exchange [e] : uri <==> (:EXCHANGE) EX_val-L(e) L-Valine exchange [e] : val-L <==> (:EXCHANGE) EX_xan(e) Xanthine exchange [e] : xan <==> (:EXCHANGE) EX_xmp(e) Xanthosine 5'-phosphate exchange [e] : xmp <==> (:EXCHANGE) EX_xtsn(e) Xanthosine exchange [e] : xtsn <==> (:EXCHANGE) EX_xyl-D(e) D-Xylose exchange [e] : xyl-D <==> (:EXCHANGE) EX_xylu-L(e) L-Xylulose exchange [e] : xylu-L <==> (:EXCHANGE) EX_zn2(e) Zinc exchange [e] : zn2 <==> (:EXCHANGE) F6PA fructose 6-phosphate aldolase [c] : f6p <==> dha + g3p (B0825 OR B3946) (RXN0-313) F6PP D-fructose 6-phosphate phosphatase [c] : f6p + h2o --> fru + pi B0822 (SUGAR-PHOSPHATASE-RXN) (:EXPANDED-RXN-MATCH) F6Pt6_2pp Fructose-6-phosphate transport via phosphate antiport (periplasm) f6p[p] + (2) pi[c] --> f6p[c] + (2) pi[p] B3666 F6Ptex fructose 6-phosphate transport via diffusion (extracellular to periplasm) f6p[e] <==> f6p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) FA100ACPHi fatty-acyl-ACP hydrolase [c] : dcaACP + h2o --> ACP + dca + h B0404 (RXN-7902) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) FA120ACPHi fatty-acyl-ACP hydrolase [c] : ddcaACP + h2o --> ACP + ddca + h B0404 (RXN-7902) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) FA140ACPHi fatty-acyl-ACP hydrolase [c] : h2o + myrsACP --> ACP + h + ttdca B0404 (RXN-7902) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) FA141ACPHi fatty-acyl-ACP hydrolase [c] : h2o + tdeACP --> ACP + h + ttdcea B0404 (:UNMAPPED-CPDS) FA160ACPHi fatty-acyl-ACP hydrolase [c] : h2o + palmACP --> ACP + h + hdca B0404 (RXN-7902) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) FA161ACPHi fatty-acyl-ACP hydrolase [c] : h2o + hdeACP --> ACP + h + hdcea B0404 (RXN-7902) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) FA80ACPHi fatty-acyl-ACP hydrolase [c] : h2o + ocACP --> ACP + h + octa B0404 FACOAE100 fatty-acid-CoA thioesterase (decanoate) [c] : dcacoa + h2o --> coa + dca + h B0452 (3.1.2.18-RXN 3.1.2.19-RXN ACYL-COA-HYDROLASE-RXN THIOESTER-RXN) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) FACOAE120 fatty-acid-CoA thioesterase (dodecanoate) [c] : ddcacoa + h2o --> coa + ddca + h B0452 FACOAE140 fatty-acid-CoA thioesterase (tetradecanoate) [c] : h2o + tdcoa --> coa + h + ttdca B0452 (3.1.2.18-RXN 3.1.2.19-RXN ACYL-COA-HYDROLASE-RXN THIOESTER-RXN) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) FACOAE141 fatty-acid-CoA thioesterase (tetradecenoate) [c] : h2o + tdecoa --> coa + h + ttdcea B0452 (:UNMAPPED-CPDS) FACOAE160 fatty-acid-CoA thioesterase (hexadecanoate) [c] : h2o + pmtcoa --> coa + h + hdca B0452 (PALMITOYL-COA-HYDROLASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) FACOAE161 fatty-acid-CoA thioesterase (hexadecenoate) [c] : h2o + hdcoa --> coa + h + hdcea B0452 (THIOESTER-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) FACOAE180 fatty-acid-CoA thioesterase (octadecanoate) [c] : h2o + stcoa --> coa + h + ocdca B0452 FACOAE181 fatty-acid-CoA thioesterase (octadecenoate) [c] : h2o + odecoa --> coa + h + ocdcea B0452 FACOAE60 fatty-acid-CoA thioesterase (hexanoate) [c] : h2o + hxcoa --> coa + h + hxa B0452 FACOAE80 fatty-acid-CoA thioesterase (octanoate) [c] : h2o + occoa --> coa + h + octa B0452 FACOAL100t2pp fatty-acid-CoA ligase (decanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + dca[p] + h[p] --> amp[c] + dcacoa[c] + h[c] + ppi[c] (B1805 OR B1701) FACOAL120t2pp fatty-acid-CoA ligase (dodecanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + ddca[p] + h[p] --> amp[c] + ddcacoa[c] + h[c] + ppi[c] (B1701 OR B1805) FACOAL140t2pp fatty-acid-CoA ligase (tetradecanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + ttdca[p] --> amp[c] + h[c] + ppi[c] + tdcoa[c] (B1701 OR B1805) FACOAL141t2pp fatty-acid-CoA ligase (tetradecenoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + ttdcea[p] --> amp[c] + h[c] + ppi[c] + tdecoa[c] (B1701 OR B1805) (:UNMAPPED-CPDS) FACOAL160t2pp fatty-acid-CoA ligase (hexadecanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + hdca[p] --> amp[c] + h[c] + pmtcoa[c] + ppi[c] (B1701 OR B1805) FACOAL161t2pp fatty-acid-CoA ligase (hexadecenoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + hdcea[p] --> amp[c] + h[c] + hdcoa[c] + ppi[c] (B1805 OR B1701) FACOAL180t2pp fatty-acid-CoA ligase (octadecanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + ocdca[p] --> amp[c] + h[c] + ppi[c] + stcoa[c] (B1701 OR B1805) FACOAL181t2pp fatty-acid-CoA ligase (octadecenoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + ocdcea[p] --> amp[c] + h[c] + odecoa[c] + ppi[c] (B1805 OR B1701) FACOAL60t2pp fatty-acid-CoA ligase (hexanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + hxa[p] --> amp[c] + h[c] + hxcoa[c] + ppi[c] (B1805 OR B1701) FACOAL80t2pp fatty-acid-CoA ligase (octanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + octa[p] --> amp[c] + h[c] + occoa[c] + ppi[c] (B1805 OR B1701) FADRx FAD reductase [c] : fad + h + nadh --> fadh2 + nad B3844 FADRx2 FAD reductase [c] : fad + h + nadph --> fadh2 + nadp (B2763 AND B2764) FALDH2 formaldehyde dehydrogenase [c] : hmgth + nad <==> Sfglutth + h + nadh B0356 (RXN-2962) (:EXPANDED-RXN-MATCH) FALDtex formaldehyde transport via diffusion (extracellular to periplasm) fald[e] <==> fald[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) FALDtpp formaldehyde transport via diffusion (periplasm) fald[p] <==> fald[c] (:DIFFUSION) (:INNER-MEMBRANE-DIFFUSION) FALGTHLs formaldehyde glutathione ligase (spontaneous) [c] : fald + gthrd <==> hmgth (RXN-2961) FBA fructose-bisphosphate aldolase [c] : fdp <==> dhap + g3p (B2097 OR B1773 OR B2925) (F16ALDOLASE-RXN) FBP fructose-bisphosphatase [c] : fdp + h2o --> f6p + pi (B3925 OR B4232) (F16BDEPHOS-RXN) FCI L-fucose isomerase [c] : fuc-L <==> fcl-L B2802 (FUCISOM-RXN) FCLK L-fuculokinase [c] : atp + fcl-L --> adp + fc1p + h B2803 (FUCULOKIN-RXN) ((RIGHT REMOVE PROTON)) FCLPA L-fuculose 1-phosphate aldolase [c] : fc1p <==> dhap + lald-L (B2800 OR B2738) (FUCPALDOL-RXN) FCLT Ferrochelatase [c] : fe2 + ppp9 --> (2) h + pheme B0475 (PROTOHEMEFERROCHELAT-RXN) FDH4pp formate dehydrogenase (quinone-8) (periplasm) for[p] + (2) h[c] + q8[c] --> co2[c] + h[p] + q8h2[c] ((B3892 AND B3893 AND B3894) OR (B1474 AND B1475 AND B1476)) FDH5pp Formate Dehydrogenase (menaquinone-8) (periplasm) for[p] + (2) h[c] + mqn8[c] --> co2[c] + h[p] + mql8[c] ((B1474 AND B1475 AND B1476) OR (B3892 AND B3893 AND B3894)) FDMO FMNH2-dependent monooxygenase [c] : fmnh2 + isetac + o2 --> fmn + gcald + h + h2o + so3 B0935 FDMO2 FMNH2-dependent monooxygenase (methanesulfonate) [c] : fmnh2 + mso3 + o2 --> fald + fmn + h + h2o + so3 B0935 FDMO3 FMNH2-dependent monooxygenase (ethanesulfonate) [c] : ethso3 + fmnh2 + o2 --> acald + fmn + h + h2o + so3 B0935 FDMO4 FMNH2-dependent monooxygenase (butanesulfonate) [c] : butso3 + fmnh2 + o2 --> btal + fmn + h + h2o + so3 B0935 FDMO6 FMNH2-dependent monooxygenase (sulfoacetate) [c] : fmnh2 + o2 + sulfac --> fmn + glx + h + h2o + so3 B0935 FE2abcpp iron (II) transport via ABC system (periplasm) atp[c] + fe2[p] + h2o[c] --> adp[c] + fe2[c] + h[c] + pi[c] B3409 FE2t2pp iron (II) transport in via proton symport (periplasm) fe2[p] + h[p] --> fe2[c] + h[c] B2392 (RXN0-2421) FE2t3pp iron (Fe+2) transport out via proton antiport (periplasm) fe2[c] + h[p] --> fe2[p] + h[c] B3915 (TRANS-RXN-8) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FE2tex iron (II) transport via diffusion (extracellular to periplasm) fe2[e] <==> fe2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) FE2tpp iron (+2) transport in via permease (no H+) fe2[p] --> fe2[c] B3040 (TRANS-RXN-8) FE3abcpp iron (III) transport via ABC system (periplasm to cytoplasm) atp[c] + fe3[p] + h2o[c] --> adp[c] + fe3[c] + h[c] + pi[c] FE3DCITabcpp iron transport from ferric-dicitrate via ABC system (periplasm) atp[c] + fe3dcit[p] + h2o[c] --> adp[c] + (2) cit[c] + fe3[c] + h[c] + pi[c] (B4290 AND B4289 AND B4288 AND B4287) FE3DCITtonex ferric-dicitrate transport via ton system (extracellular) fe3dcit[e] + h[p] --> fe3dcit[p] + h[c] (B4291 AND (B1252 AND B3005 AND B3006)) (RXN0-1684) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FE3DHBZR "release of Fe(III) from ferric 2,3-dihydroxybenzoylserine" [c] : fe3dhbzs --> 23dhbzs + fe3 FE3DHBZSabcpp "ferric 2,3-dihydroxybenzoylserine transport via ABC system (periplasm)" atp[c] + fe3dhbzs[p] + h2o[c] --> adp[c] + fe3dhbzs[c] + h[c] + pi[c] (B0592 AND B0588 AND B0590 AND B0589) FE3DHBZStonex "ferric 2,3-dihydroxybenzoylserine transport via ton system (extracellular)" fe3dhbzs[e] + h[p] --> fe3dhbzs[p] + h[c] ((B0805 AND (B1252 AND B3005 AND B3006)) OR (B2155 AND (B1252 AND B3005 AND B3006))) (RXN0-1721) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FE3HOXabcpp ferric-dicitrate transport via ABC system (periplasm) atp[c] + fe3hox[p] + h2o[c] --> adp[c] + fe3hox[c] + h[c] + pi[c] (B0153 AND B0151 AND B0152) (ABC-11-RXN) ((RIGHT REMOVE PROTON)) FE3HOXexs Fe(III) hydroxamate Fe-loading reaction (spontaneaous) [e] : fe3 + fe3hox-un --> fe3hox (:UNMAPPED-CPDS) FE3HOXR1 Fe(III)hydroxamate reductase [c] : fadh2 + (2) fe3hox --> fad + (2) fe2 + (2) fe3hox-un + (2) h (:UNMAPPED-CPDS) FE3HOXR2 Fe(III)hydroxamate reductase [c] : (2) fe3hox + fmnh2 --> (2) fe2 + (2) fe3hox-un + fmn + (2) h (:UNMAPPED-CPDS) FE3HOXR3 Fe(III)hydroxamate reductase [c] : (2) fe3hox + rbflvrd --> (2) fe2 + (2) fe3hox-un + (2) h + ribflv (:UNMAPPED-CPDS) FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) fe3hox[e] + h[p] --> fe3hox[p] + h[c] (B0150 AND (B1252 AND B3005 AND B3006)) (RXN0-1701) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FE3HOXUtex Fe(III)hydroxamate unloaded secretion fe3hox-un[c] + h[p] --> fe3hox-un[p] + h[c] (:UNMAPPED-CPDS) FE3HOXUtpp Fe(III)hydroxamate unloaded secretion (extracellular) fe3hox-un[p] + h[p] --> fe3hox-un[e] + h[c] (:UNMAPPED-CPDS) FE3Ri Fe(III) reduction [c] : fadh2 + (2) fe3 --> fad + (2) fe2 + (2) h B3844 FE3tex iron (III) transport via diffusion (extracellular to periplasm) fe3[e] <==> fe3[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) FECRMabcpp ferrichrome transport via ABC system (periplasm) atp[c] + fecrm[p] + h2o[c] --> adp[c] + fecrm[c] + h[c] + pi[c] (B0153 AND B0151 AND B0152) (:UNMAPPED-CPDS) FECRMexs ferrichrome Fe(III)-loading reaction (spontaneous) [e] : fe3 + fecrm-un --> fecrm (:UNMAPPED-CPDS) FECRMR1 Ferrichrome reductase [c] : fadh2 + (2) fecrm --> fad + (2) fe2 + (2) fecrm-un + (2) h (:UNMAPPED-CPDS) FECRMR2 Ferrichrome reductase [c] : (2) fecrm + fmnh2 --> (2) fe2 + (2) fecrm-un + fmn + (2) h (:UNMAPPED-CPDS) FECRMR3 Ferrichrome reductase [c] : (2) fecrm + rbflvrd --> (2) fe2 + (2) fecrm-un + (2) h + ribflv (:UNMAPPED-CPDS) FECRMtonex ferrichrome transport via ton system (extracellular) fecrm[e] + h[p] --> fecrm[p] + h[c] (B0150 AND (B1252 AND B3005 AND B3006)) (:UNMAPPED-CPDS) FECRMUtex ferrichrome (minus Fe) secretion (to extracellular) fecrm-un[p] + h[p] --> fecrm-un[e] + h[c] (:UNMAPPED-CPDS) FECRMUtpp ferrichrome (minus Fe) secretion (to periplasm) fecrm-un[c] + h[p] --> fecrm-un[p] + h[c] (:UNMAPPED-CPDS) FEENTERabcpp Fe-enterobactin transport via ABC system (periplasm) atp[c] + feenter[p] + h2o[c] --> adp[c] + feenter[c] + h[c] + pi[c] (B0592 AND B0588 AND B0590 AND B0589) (ABC-10-RXN) ((RIGHT REMOVE PROTON)) FEENTERexs enterobactin Fe(III) binding (spontaneous) [e] : enter + fe3 --> feenter FEENTERR1 Fe-enterobactin reduction (Fe(III)-unloading) [c] : fadh2 + (2) feenter --> (2) enter + fad + (2) fe2 + (2) h FEENTERR2 Fe-enterobactin reduction (Fe(III)-unloading) [c] : (2) feenter + fmnh2 --> (2) enter + (2) fe2 + fmn + (2) h FEENTERR3 Fe-enterobactin reduction (Fe(III)-unloading) [c] : (2) feenter + rbflvrd --> (2) enter + (2) fe2 + (2) h + ribflv FEENTERtex enterochelin transport (secretion periplasm) enter[p] + h[p] --> enter[e] + h[c] FEENTERtonex Fe-enterobactin transport via ton system (extracellular) feenter[e] + h[p] --> feenter[p] + h[c] (B0584 AND (B1252 AND B3005 AND B3006)) (RXN0-1682) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FEENTERtpp enterochelin transport (secretion) enter[c] + h[p] --> enter[p] + h[c] B0591 FEOXAMabcpp ferroxamine transport via ABC system (periplasm) atp[c] + feoxam[p] + h2o[c] --> adp[c] + feoxam[c] + h[c] + pi[c] (B0153 AND B0151 AND B0152) (:UNMAPPED-CPDS) FEOXAMexs ferroxamine Fe3-loading reaction (spontaneous) [e] : fe3 + feoxam-un --> feoxam (:UNMAPPED-CPDS) FEOXAMR1 ferroxamine reductase [c] : fadh2 + (2) feoxam --> fad + (2) fe2 + (2) feoxam-un + (2) h (:UNMAPPED-CPDS) FEOXAMR2 ferroxamine reductase [c] : (2) feoxam + fmnh2 --> (2) fe2 + (2) feoxam-un + fmn + (2) h (:UNMAPPED-CPDS) FEOXAMR3 ferroxamine reductase [c] : (2) feoxam + rbflvrd --> (2) fe2 + (2) feoxam-un + (2) h + ribflv (:UNMAPPED-CPDS) FEOXAMtonex ferroxamine transport via ton system (extracellular) feoxam[e] + h[p] --> feoxam[p] + h[c] (B0150 AND (B1252 AND B3005 AND B3006)) (:UNMAPPED-CPDS) FEOXAMUtex ferroxamine (minus Fe3) secretion (to extracellular) feoxam-un[p] + h[p] --> feoxam-un[e] + h[c] (:UNMAPPED-CPDS) FEOXAMUtpp ferroxamine (minus Fe3) secretion (to periplasm) feoxam-un[c] + h[p] --> feoxam-un[p] + h[c] (:UNMAPPED-CPDS) FEROpp ferroxidase [p] : (4) fe2 + (4) h + o2 --> (4) fe3 + (2) h2o B0123 FFSD beta-fructofuranosidase [c] : h2o + suc6p --> fru + g6p (3.2.1.26-RXN) (:METACYC) FHL Formate-hydrogen lyase [c] : for + h --> co2 + h2 ((B4079 AND (B2481 AND B2482 AND B2483 AND B2484 AND B2485 AND B2486 AND B2487 AND B2488 AND B2489 AND B2490)) OR (B4079 AND (B2719 AND B2720 AND B2721 AND B2722 AND B2723 AND B2724))) (FHLMULTI-RXN) ((LEFT REMOVE PROTON)) FLDR flavodoxin reductase (NADPH) [c] : fldox + h + nadph --> fldrd + nadp ((B0684 AND B3924) OR (B2895 AND B3924)) (FLAVONADPREDUCT-RXN) FLVR flavin reductase [c] : h + nadph + ribflv --> nadp + rbflvrd ((B2763 AND B2764) OR B3844) (|NADPH-DEHYDROGENASE-(FLAVIN)-RXN|) (:METACYC (LEFT REMOVE PROTON)) FLVR(NAD) flavin reductase (NAD) [c] : h + nadh + ribflv --> nad + rbflvrd B3844 FMETTRS Methionyl-tRNA formyltransferase [c] : 10fthf + mettrna --> fmettrna + h + thf B3288 FMNAT FMN adenylyltransferase [c] : atp + fmn + h --> fad + ppi B0025 (FADSYN-RXN) ((LEFT REMOVE PROTON)) FMNRx FMN reductase [c] : fmn + h + nadh --> fmnh2 + nad (B0937 OR B3844) (FMNREDUCT-RXN) (:EXPANDED-RXN-MATCH) FMNRx2 FMN reductase [c] : fmn + h + nadph --> fmnh2 + nadp (B0937 OR (B2763 AND B2764) OR B3844) (FMNREDUCT-RXN) (:EXPANDED-RXN-MATCH) FORt2pp "formate transport via proton symport (uptake only, periplasm)" for[p] + h[p] --> for[c] + h[c] (B0904 OR B2492) (TRANS-RXN-1) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FORtex formate transport via diffusion (extracellular to periplasm) for[e] <==> for[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) FORtppi formate transport via diffusion (cytoplasm to periplasm) for[c] --> for[p] (B0904 OR B2492) (TRANS-RXN-1) FRD2 fumarate reductase [c] : fum + mql8 --> mqn8 + succ (B4151 AND B4152 AND B4153 AND B4154) FRD3 fumarate reductase [c] : 2dmmql8 + fum --> 2dmmq8 + succ (B4151 AND B4152 AND B4153 AND B4154) FRUK fructose-1-phosphate kinase [c] : atp + f1p --> adp + fdp + h B2168 (1PFRUCTPHOSN-RXN) ((RIGHT REMOVE PROTON)) FRULYSDG Fructoselysine phosphate deglycase [c] : frulysp + h2o <==> g6p + lys-L B3371 (RXN0-963) FRULYSE fructoselysine 3-epimerase [c] : psclys <==> frulys B4474 (RXN0-4841) FRULYSK Fructoselysine Kinase [c] : atp + frulys --> adp + frulysp + h B3374 (RXN0-962) ((RIGHT REMOVE PROTON)) FRULYSt2pp Fructoselysine transport via proton symport (periplasm) frulys[p] + h[p] --> frulys[c] + h[c] B3370 FRULYStex fructoselysine transporter via diffusion (extracellular) frulys[e] <==> frulys[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) FRUpts2pp Fructose transport via PEP:Pyr PTS (f6p generating) (periplasm) fru[p] + pep[c] --> f6p[c] + pyr[c] (B1817 AND B1818 AND B1819 AND B2415 AND B2416) (TRANS-RXN-158A) FRUptspp D-fructose transport via PEP:Pyr PTS (periplasm) fru[p] + pep[c] --> f1p[c] + pyr[c] (B2167 AND B2169 AND B2415 AND B2416) (TRANS-RXN-158) FRUtex D-fructose transport via diffusion (extracellular to periplasm) fru[e] <==> fru[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) FRUURt2rpp "D-fructuronate transport via proton symport, reversible (periplasm)" fruur[p] + h[p] <==> fruur[c] + h[c] B4321 (TRANS-RXN-81) FRUURtex D-fructuronate transport via diffusion (extracellular) fruur[e] <==> fruur[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) FTHFD formyltetrahydrofolate deformylase [c] : 10fthf + h2o --> for + h + thf B1232 (FORMYLTHFDEFORMYL-RXN) ((RIGHT REMOVE PROTON)) FUCtex L-fucose transport via diffusion (extracellular to periplasm) fuc-L[e] <==> fuc-L[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) FUCtpp L-fucose transport via proton symport (periplasm) fuc-L[p] + h[p] <==> fuc-L[c] + h[c] B2801 (TRANS-RXN-20) FUM fumarase [c] : fum + h2o <==> mal-L (B1612 OR B4122 OR B1611) (FUMHYDR-RXN) FUMt2_2pp Fumarate transport via proton symport (2 H) (periplasm) fum[p] + (2) h[p] --> fum[c] + (2) h[c] B3528 (TRANS-RXN-121B TRANS-RXN-202) FUMt2_3pp Fumarate transport via proton symport (3 H) (periplasm) fum[p] + (3) h[p] --> fum[c] + (3) h[c] (B4138 OR B4123 OR B0621) (TRANS-RXN-121B TRANS-RXN-202) FUMtex Fumarate transport via diffusion (extracellular to periplasm) fum[e] <==> fum[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) G1PACT glucosamine-1-phosphate N-acetyltransferase [c] : accoa + gam1p --> acgam1p + coa + h B3730 (2.3.1.157-RXN) ((RIGHT REMOVE PROTON)) G1PPpp Glucose-1-phosphatase [p] : g1p + h2o --> glc-D + pi B1002 G1Ptex D-glucose 1-phosphate transport via diffusion g1p[e] <==> g1p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) G1PTT glucose-1-phosphate thymidylyltransferase [c] : dttp + g1p + h --> dtdpglu + ppi (B3789 OR B2039) (DTDPGLUCOSEPP-RXN) ((LEFT REMOVE PROTON)) G1SAT glutamate-1-semialdehyde aminotransferase [c] : glu1sa <==> 5aop B0154 (GSAAMINOTRANS-RXN) G2PPpp glycerol 2-phosphate phosphatase (periplasmic) [p] : glyc2p + h2o --> glyc + pi B4055 G3PAT120 glycerol-3-phosphate acyltransferase (C12:0) [c] : ddcaACP + glyc3p --> 1ddecg3p + ACP B4041 (GLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) G3PAT140 glycerol-3-phosphate acyltransferase (C14:0) [c] : glyc3p + myrsACP --> 1tdecg3p + ACP B4041 (GLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) G3PAT141 glycerol-3-phosphate acyltransferase (C14:1) [c] : glyc3p + tdeACP --> 1tdec7eg3p + ACP B4041 (GLYCEROL-3-P-ACYLTRANSFER-RXN) G3PAT160 glycerol-3-phosphate acyltransferase (C16:0) [c] : glyc3p + palmACP --> 1hdecg3p + ACP B4041 (GLYCEROL-3-P-ACYLTRANSFER-RXN) G3PAT161 glycerol-3-phosphate acyltransferase (C16:1) [c] : glyc3p + hdeACP --> 1hdec9eg3p + ACP B4041 (GLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) G3PAT180 glycerol-3-phosphate acyltransferase (C18:0) [c] : glyc3p + ocdcaACP --> 1odecg3p + ACP B4041 (GLYCEROL-3-P-ACYLTRANSFER-RXN) G3PAT181 glycerol-3-phosphate acyltransferase (C18:1) [c] : glyc3p + octeACP --> 1odec11eg3p + ACP B4041 (GLYCEROL-3-P-ACYLTRANSFER-RXN) G3PCabcpp sn-glycerol-3-phosphocholine transport via ABC system (periplasm) atp[c] + g3pc[p] + h2o[c] --> adp[c] + g3pc[c] + h[c] + pi[c] (B3452 AND B3453 AND B3450 AND B3451) G3PCtex glycero-3-phosphocholine transport via diffusion (extracellular to periplasm) g3pc[e] <==> g3pc[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) G3PD2 glycerol-3-phosphate dehydrogenase (NADP) [c] : glyc3p + nadp <==> dhap + h + nadph B3608 (GLYC3PDEHYDROGBIOSYN-RXN) (:EXPANDED-RXN-MATCH) G3PD5 glycerol-3-phosphate dehydrogenase (ubiquinone-8) [c] : glyc3p + q8 --> dhap + q8h2 ((B2241 AND B2242 AND B2243) OR B3426) (GLYC3PDEHYDROG-RXN) G3PD6 glycerol-3-phosphate dehydrogenase (menaquinone-8) [c] : glyc3p + mqn8 --> dhap + mql8 (B2241 AND B2242 AND B2243) G3PD7 glycerol-3-phosphate dehydrogenase (demethylmenaquinone-8) [c] : 2dmmq8 + glyc3p --> 2dmmql8 + dhap (B2241 AND B2242 AND B2243) G3PEabcpp sn-glycerol-3-phosphoethanolamine transport via ABC system (periplasm) atp[c] + g3pe[p] + h2o[c] --> adp[c] + g3pe[c] + h[c] + pi[c] (B3452 AND B3453 AND B3450 AND B3451) G3PEtex glycero-3-phosphoethanolamine transport via diffusion (extracellular to periplasm) g3pe[e] <==> g3pe[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) G3PGabcpp sn-glycerol-3-phosphoglycerol transport via ABC system (periplasm) atp[c] + g3pg[p] + h2o[c] --> adp[c] + g3pg[c] + h[c] + pi[c] (B3452 AND B3453 AND B3450 AND B3451) G3PGtex glycerophoglycerol transport via diffusion (extracellular to periplasm) g3pg[e] <==> g3pg[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) G3PIabcpp sn-glycerol-3-phosphoethanolamine transport via ABC system (periplasm) atp[c] + g3pi[p] + h2o[c] --> adp[c] + g3pi[c] + h[c] + pi[c] (B3452 AND B3453 AND B3450 AND B3451) G3PItex glycero-3-phospho-1-inositol transport via diffusion (extracellular to periplasm) g3pi[e] <==> g3pi[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) G3PSabcpp sn-glycerol-3-phosphoserine transport via ABC system (periplasm) atp[c] + g3ps[p] + h2o[c] --> adp[c] + g3ps[c] + h[c] + pi[c] (B3452 AND B3453 AND B3450 AND B3451) (:UNMAPPED-CPDS) G3PStex glycerophosphserine transport via diffusion (extracellular to periplasm) g3ps[e] <==> g3ps[p] (B0241 OR B0929 OR B1377 OR B2215) (:UNMAPPED-CPDS) G3PT glycerol-3-phosphatase [c] : glyc3p + h2o --> glyc + pi B0822 (GLYCEROL-1-PHOSPHATASE-RXN) (:METACYC) G5SADr "L-glutamate 5-semialdehyde dehydratase, reversible" [c] : glu5sa <==> 1pyr5c + h + h2o (SPONTPRO-RXN) ((RIGHT REMOVE PROTON)) G5SD glutamate-5-semialdehyde dehydrogenase [c] : glu5p + h + nadph --> glu5sa + nadp + pi B0243 (GLUTSEMIALDEHYDROG-RXN) G6PDA glucosamine-6-phosphate deaminase [c] : gam6p + h2o --> f6p + nh4 B0678 (GLUCOSAMINE-6-P-DEAMIN-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) G6PDH2r glucose 6-phosphate dehydrogenase [c] : g6p + nadp <==> 6pgl + h + nadph B1852 (GLU6PDEHYDROG-RXN) G6PP glucose-6-phosphate phosphatase [c] : g6p + h2o --> glc-D + pi B0822 (SUGAR-PHOSPHATASE-RXN) (:EXPANDED-RXN-MATCH) G6Pt6_2pp Glucose-6-phosphate transport via phosphate antiport (periplasm) g6p[p] + (2) pi[c] --> g6p[c] + (2) pi[p] B3666 G6Ptex glucose 6-phosphate transport via diffusion (extracellular to periplasm) g6p[e] <==> g6p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GAL1PPpp D-galactose 1-phosphatase [p] : gal1p + h2o --> gal + pi B1002 GAL1Ptex D-galactose 1-phosphate transport via diffusion (extracellular to periplasm) gal1p[e] <==> gal1p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GALabcpp D-galactose transport via ABC system (periplasm) atp[c] + gal[p] + h2o[c] --> adp[c] + gal[c] + h[c] + pi[c] (B2149 AND B2150 AND B2148) (ABC-18-RXN) ((RIGHT REMOVE PROTON)) GALBDtex beta D-galactose transport via diffusion (extracellular to periplasm) gal-bD[e] <==> gal-bD[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) GALCTD galactarate dehydratase [c] : galct-D --> 5dh4dglc + h2o B3128 (GALACTARDEHYDRA-RXN) GALCTLO L-galactonate oxidoreductase [c] : galctn-L + nad --> h + nadh + tagur B4358 (:UNMAPPED-CPDS) GALCTND galactonate dehydratase [c] : galctn-D --> 2dh3dgal + h2o B4478 (GALACTONDEHYDRAT-RXN) GALCTNLt2pp L-galactonate transport via proton symport (periplasm) galctn-L[p] + h[p] --> galctn-L[c] + h[c] B4356 (:UNMAPPED-CPDS) GALCTNLtex L-galactonate transport via diffusion (extracellular to periplasm) galctn-L[e] <==> galctn-L[p] (B2215 OR B1377 OR B0929 OR B0241) (:UNMAPPED-CPDS) GALCTNt2pp D-galactonate transport via proton symport (periplasm) galctn-D[p] + h[p] --> galctn-D[c] + h[c] B3691 (TRANS-RXN-16) GALCTNtex D-galactonate transport via diffusion (extracellular to periplasm) galctn-D[e] <==> galctn-D[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GALCTt2rpp "D-galactarte transport via proton symport, reversible (periplasm)" galct-D[p] + h[p] <==> galct-D[c] + h[c] (B2789 OR B3127) GALCTtex D-galactarte transport via diffusion (extracellular to periplasm) galct-D[e] <==> galct-D[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GALKr galactokinase [c] : atp + gal <==> adp + gal1p + h (B0757 OR B2045) (GALACTOKIN-RXN) ((RIGHT REMOVE PROTON)) GALM2pp aldose-1-epimerase [p] : gal-bD --> gal B0756 GALS3 a-galactosidase (melibiose) [c] : h2o + melib --> gal + glc-D B4119 (ALPHAGALACTOSID-RXN) GALT1 galactosyltransferase I (LPS core synthesis) [c] : gicolipa + udpg --> gagicolipa + h + udp B3628 (:UNMAPPED-CPDS) GALt2pp D-galactose transport in via proton symport (periplasm) gal[p] + h[p] --> gal[c] + h[c] B2943 (TRANS-RXN-21) GALtex D-galactose transport via diffusion (extracellular to periplasm) gal[e] <==> gal[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) galt[p] + pep[c] --> galt1p[c] + pyr[c] (B2094 AND B2093 AND B2092 AND B2415 AND B2416) (TRANS-RXN-161) GALTtex Galactitol transport via diffusion (extracellular to periplasm) galt[e] <==> galt[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) GALUi UTP-glucose-1-phosphate uridylyltransferase (irreversible) [c] : g1p + h + utp --> ppi + udpg B1236 (GLUC1PURIDYLTRANS-RXN) ((LEFT REMOVE PROTON)) GALURt2rpp "D-galacturonate transport via proton symport, reversible (periplasm)" galur[p] + h[p] <==> galur[c] + h[c] B3093 (TRANS-RXN-123) GALURtex D-galacturonate transport via diffusion (extracellular to periplasm) galur[e] <==> galur[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GAM6Pt6_2pp D-Glucosamine 6-phosphate transport via phosphate antiport (periplasm) gam6p[p] + (2) pi[c] --> gam6p[c] + (2) pi[p] B3666 GAMAN6Ptex D-glucosamine 6-phosphate transport via diffusion (extracellular to periplasm) gam6p[e] <==> gam6p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GAMptspp D-glucosamine transport via PEP:Pyr PTS (periplasm) gam[p] + pep[c] --> gam6p[c] + pyr[c] (B1817 AND B1818 AND B1819 AND B2415 AND B2416) (TRANS-RXN-167A) GAMtex D-glucosamine transport via diffusion (extracellular to periplasm) gam[e] <==> gam[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GAPD glyceraldehyde-3-phosphate dehydrogenase [c] : g3p + nad + pi <==> 13dpg + h + nadh B1779 (GAPOXNPHOSPHN-RXN) ((RIGHT REMOVE PROTON)) GARFT phosphoribosylglycinamide formyltransferase [c] : 10fthf + gar <==> fgam + h + thf B2500 (GART-RXN) ((RIGHT REMOVE PROTON)) GART GAR transformylase-T [c] : atp + for + gar --> adp + fgam + h + pi B1849 (GARTRANSFORMYL2-RXN) ((RIGHT REMOVE PROTON)) GBBTNtex gamma-butyrobetaine transport via diffusion (extracellular to periplasm) gbbtn[e] <==> gbbtn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GCALDD Glycolaldehyde dehydrogenase [c] : gcald + h2o + nad --> glyclt + (2) h + nadh B1415 (GLYCOLALD-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) GDMANE GDP-4-dehydro-6-deoxy-D-mannose epimerase [c] : gdpddman --> gdpofuc B2052 (:UNMAPPED-CPDS) GDPDPK GDP diphosphokinase [c] : atp + gdp --> amp + h + ppgpp (B2784 OR B3650) (GDPPYPHOSKIN-RXN) ((RIGHT REMOVE PROTON)) GDPMNH GDP-mannose mannosyl hydrolase [c] : gdpmann + h2o --> gdp + h + man B2051 (GDPMANMANHYDRO-RXN) ((RIGHT REMOVE PROTON)) GDPMNP GDP-mannose phyrophosphatase [c] : gdpmann + h2o --> gmp + (2) h + man1p B2467 (RXN0-5108) ((RIGHT REMOVE PROTON)) GDPtex GDP transport via diffusion (extracellular to periplasm) gdp[e] <==> gdp[p] (B0241 OR B1377 OR B2215 OR B0929) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GF6PTA glutamine-fructose-6-phosphate transaminase [c] : f6p + gln-L --> gam6p + glu-L B3729 (L-GLN-FRUCT-6-P-AMINOTRANS-RXN) GGGABADr gamma-glutamyl-gamma aminobutyric acid dehydrogenase [c] : ggbutal + h2o + nadp <==> gg4abut + (2) h + nadph B1300 (RXN0-3922) (:EXPANDED-RXN-MATCH) GGGABAH gamma-glutamyl-gamma-aminobutyric acid hydrolase [c] : gg4abut + h2o --> 4abut + glu-L B1298 (RXN0-3942) GGPTRCO gamma glutamyl putrescine oxidase [c] : ggptrc + h2o + o2 --> ggbutal + h2o2 + nh4 B1301 (RXN0-3921) GGPTRCS gamma glutamyl putrescine synthase [c] : atp + glu-L + ptrc --> adp + ggptrc + h + pi B1297 (RXN0-3901) ((RIGHT REMOVE PROTON)) GHMT2r "glycine hydroxymethyltransferase, reversible" [c] : ser-L + thf <==> gly + h2o + mlthf B2551 (GLYOHMETRANS-RXN) GK1 guanylate kinase (GMP:ATP) [c] : atp + gmp <==> adp + gdp B3648 (GUANYL-KIN-RXN) GLBRAN2 "1,4-alpha-glucan branching enzyme (glycogen -> bglycogen)" [c] : glycogen --> bglycogen B3432 (GLYCOGEN-BRANCH-RXN) GLCabcpp D-glucose transport via ABC system (periplasm) atp[c] + glc-D[p] + h2o[c] --> adp[c] + glc-D[c] + h[c] + pi[c] (B2149 AND B2150 AND B2148) GLCATr D-glucose O-acetyltransferase [c] : accoa + glc-D <==> acglc-D + coa B0459 GLCDpp Glucose dehydrogenase (ubiquinone-8 as acceptor) (periplasm) glc-D[p] + h2o[p] + q8[c] --> glcn[p] + h[p] + q8h2[c] B0124 GLCNt2rpp "D-gluconate transport via proton symport, reversible (periplasm)" glcn[p] + h[p] <==> glcn[c] + h[c] (B3415 OR B4265 OR B4321 OR B4476) GLCNtex D-gluconate transport via diffusion (extracellular to periplasm) glcn[e] <==> glcn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLCP glycogen phosphorylase [c] : glycogen + pi --> g1p (B3428 OR B3417) GLCP2 glycogen phosphorylase [c] : bglycogen + pi --> g1p (B3428 OR B3417) GLCptspp D-glucose transport via PEP:Pyr PTS (periplasm) glc-D[p] + pep[c] --> g6p[c] + pyr[c] ((B2417 AND B1621 AND B2415 AND B2416) OR (B2417 AND B1101 AND B2415 AND B2416) OR (B1817 AND B1818 AND B1819 AND B2415 AND B2416)) (TRANS-RXN-157) GLCRAL 5-dehydro-4-deoxyglucarate aldolase [c] : 5dh4dglc --> 2h3oppan + pyr B3126 (KDGALDOL-RXN) GLCRD glucarate dehydratase [c] : glcr --> 5dh4dglc + h2o (B2787 OR B2788) (GLUCARDEHYDRA-RXN) GLCRt2rpp "D-glucarate transport via proton symport, reversible (periplasm)" glcr[p] + h[p] <==> glcr[c] + h[c] (B3127 OR B2789) GLCRtex D-glucarate transport via diffusion (extracellular to periplasm) glcr[e] <==> glcr[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLCS1 glycogen synthase (ADPGlc) [c] : adpglc --> adp + glycogen + h B3429 GLCt2pp D-glucose transport in via proton symport (periplasm) glc-D[p] + h[p] --> glc-D[c] + h[c] B2943 GLCtex glucose transport via diffusion (extracellular to periplasm) glc-D[e] <==> glc-D[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) GLCtexi D-glucoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible glc-D[e] --> glc-D[p] B4036 (RXN0-1683) GLCTR1 glucosyltransferase I (LPS core synthesis) [c] : icolipa + udpg --> gicolipa + h + udp B3631 (:UNMAPPED-CPDS) GLCTR2 glucosyltransferase II (LPS core synthesis) [c] : gagicolipa + udpg --> ggagicolipa + h + udp B3627 (:UNMAPPED-CPDS) GLCTR3 glucosyltransferase III (LPS core synthesis) [c] : ggagicolipa + udpg --> gggagicolipa + h + udp B3626 (:UNMAPPED-CPDS) GLCUR1Ptex D-glucuronate 1-phosphate transport via diffusion (extracellular to periplasm) glcur1p[e] <==> glcur1p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLCURt2rpp "D-glucuronate transport via proton symport, reversible (periplasm)" glcur[p] + h[p] <==> glcur[c] + h[c] (B3909 OR B3093) (TRANS-RXN-35) GLCURtex D-glucuronat transport via diffusion (extracellular to periplasm) glcur[e] <==> glcur[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLDBRAN2 glycogen debranching enzyme (bglycogen -> glycogen) [c] : bglycogen --> glycogen B3431 (GLYCOGEN-BRANCH-RXN) GLGC glucose-1-phosphate adenylyltransferase [c] : atp + g1p + h --> adpglc + ppi B3430 (GLUC1PADENYLTRANS-RXN) ((LEFT REMOVE PROTON)) GLNabcpp L-glutamine transport via ABC system (periplasm) atp[c] + gln-L[p] + h2o[c] --> adp[c] + gln-L[c] + h[c] + pi[c] (B0811 AND B0810 AND B0809) (ABC-12-RXN) ((RIGHT REMOVE PROTON)) GLNS glutamine synthetase [c] : atp + glu-L + nh4 --> adp + gln-L + h + pi (B3870 OR B1297) (GLUTAMINESYN-RXN) ((LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT REMOVE PROTON)) GLNtex L-glutamine transport via diffusion (extracellular to periplasm) gln-L[e] <==> gln-L[p] (B0929 OR B1377 OR B2215 OR B0241) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLNTRS Glutaminyl-tRNA synthetase [c] : atp + gln-L + trnagln --> amp + glntrna + ppi B0680 (GLUTAMINE--TRNA-LIGASE-RXN) GLTPD Galactitol-1-phosphate dehydrogenase [c] : galt1p + nad <==> h + nadh + tag6p-D B2091 (GALACTITOLPDEHYD-RXN) ((RIGHT REMOVE PROTON)) GLU5K glutamate 5-kinase [c] : atp + glu-L --> adp + glu5p B0242 (GLUTKIN-RXN) GLUabcpp L-glutamate transport via ABC system (periplasm) atp[c] + glu-L[p] + h2o[c] --> adp[c] + glu-L[c] + h[c] + pi[c] (B0655 AND B0654 AND B0653 AND B0652) (ABC-13-RXN) ((RIGHT REMOVE PROTON)) GLUABUTt7pp 4-aminobutyrate/glutamate antiport (periplasm) 4abut[c] + glu-L[p] <==> 4abut[p] + glu-L[c] B1492 (TRANS-RXN-261) GLUCYS gamma-glutamylcysteine synthetase [c] : atp + cys-L + glu-L --> adp + glucys + h + pi B2688 (GLUTCYSLIG-RXN) ((RIGHT REMOVE PROTON)) GLUDC Glutamate Decarboxylase [c] : glu-L + h --> 4abut + co2 (B3517 OR B1493) (GLUTDECARBOX-RXN) ((LEFT REMOVE PROTON)) GLUDy glutamate dehydrogenase (NADP) [c] : glu-L + h2o + nadp <==> akg + h + nadph + nh4 B1761 GLUN glutaminase [c] : gln-L + h2o --> glu-L + nh4 (B1812 OR B0485 OR B1524) (GLUTAMIN-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) GLUNpp glutaminase [p] : gln-L + h2o --> glu-L + nh4 B2957 GLUPRT glutamine phosphoribosyldiphosphate amidotransferase [c] : gln-L + h2o + prpp --> glu-L + ppi + pram B2312 (PRPPAMIDOTRANS-RXN) GLUR glutamate racemase [c] : glu-D <==> glu-L B3967 (GLUTRACE-RXN) GLUSy glutamate synthase (NADPH) [c] : akg + gln-L + h + nadph --> (2) glu-L + nadp (B3212 AND B3213) (GLUTAMATESYN-RXN) ((LEFT REMOVE PROTON)) GLUt2rpp "L-glutamate transport via proton symport, reversible (periplasm)" glu-L[p] + h[p] <==> glu-L[c] + h[c] B4077 (TRANS-RXN-162) GLUt4pp Na+/glutamate symport (periplasm) glu-L[p] + na1[p] --> glu-L[c] + na1[c] B3653 (TRANS-RXN-122) GLUtex L-glutamate transport via diffusion (extracellular to periplasm) glu-L[e] <==> glu-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLUTRR glutamyl-tRNA reductase [c] : glutrna + h + nadph --> glu1sa + nadp + trnaglu B1210 (GLUTRNAREDUCT-RXN) GLUTRS Glutamyl-tRNA synthetase [c] : atp + glu-L + trnaglu --> amp + glutrna + ppi B2400 (GLURS-RXN) GLXCL glyoxalate carboligase [c] : (2) glx + h --> 2h3oppan + co2 B0507 (GLYOCARBOLIG-RXN) ((LEFT REMOVE PROTON)) GLYALDtex Glyceraldehyde transport via diffusion (extracellular to periplasm) glyald[e] <==> glyald[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLYALDtpp Glyceraldehyde facilitated diffusion (periplasm) glyald[p] <==> glyald[c] B3927 GLYAT glycine C-acetyltransferase [c] : accoa + gly <==> 2aobut + coa B3617 (AKBLIG-RXN) GLYBabcpp Glycine betaine transport via ABC system (periplasm) atp[c] + glyb[p] + h2o[c] --> adp[c] + glyb[c] + h[c] + pi[c] (B2128 AND B2129 AND B2130 AND B2131) GLYBt2pp Glycine betaine transport via proton symport (periplasm) glyb[p] + h[p] --> glyb[c] + h[c] B1801 (TRANS-RXN-29A) GLYBtex Glycine betaine transport via diffusion (extracellular to periplasm) glyb[e] <==> glyb[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLYC2Ptex Glycerol-2-phosphate transport via diffusion (extracellular to periplasm) glyc2p[e] <==> glyc2p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLYC3Pabcpp sn-Glycerol 3-phosphate transport via ABC system (periplasm) atp[c] + glyc3p[p] + h2o[c] --> adp[c] + glyc3p[c] + h[c] + pi[c] (B3452 AND B3453 AND B3450 AND B3451) (ABC-34-RXN) ((RIGHT REMOVE PROTON)) GLYC3Pt6pp Glycerol-3-phosphate : phosphate antiporter (periplasm) glyc3p[p] + pi[c] --> glyc3p[c] + pi[p] B2240 GLYC3Ptex Glycerol-3-phosphate transport via diffusion (extracellular to periplasm) glyc3p[e] <==> glyc3p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLYCAt2rpp "D-glycerate transport via proton symport, reversible (periplasm)" glyc-R[p] + h[p] <==> glyc-R[c] + h[c] (B3127 OR B2789) GLYCAtex D-glycerate transport via diffusion (extracellular to periplasm) glyc-R[e] <==> glyc-R[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLYCDx Glycerol dehydrogenase [c] : glyc + nad --> dha + h + nadh B3945 (GLYCDEH-RXN) ((RIGHT REMOVE PROTON)) GLYCK glycerate kinase [c] : atp + glyc-R --> 3pg + adp + h B0514 (GLY3KIN-RXN) ((RIGHT REMOVE PROTON)) GLYCK2 glycerate kinase [c] : atp + glyc-R --> 2pg + adp + h B3124 (GKI-RXN) ((RIGHT REMOVE PROTON)) GLYCL Glycine Cleavage System [c] : gly + nad + thf --> co2 + mlthf + nadh + nh4 (B2904 AND B2903 AND B2905 AND B0116) (GCVMULTI-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) GLYCLTDx Glycolate dehydrogenase (NAD) [c] : glx + h + nadh --> glyclt + nad (B3553 OR B1033) (GLYCOLATE-REDUCTASE-RXN) (:METACYC (LEFT REMOVE PROTON)) GLYCLTDy Glycolate dehydrogenase (NADP) [c] : glx + h + nadph --> glyclt + nadp (B3553 OR B1033) (|GLYOXYLATE-REDUCTASE-(NADP+)-RXN|) ((LEFT REMOVE PROTON)) GLYCLTt2rpp "glycolate transport via proton symport, reversible (periplasm)" glyclt[p] + h[p] <==> glyclt[c] + h[c] (B3603 OR B2975) (TRANS-RXN-105) GLYCLTt4pp glycolate transport via sodium symport (periplasm) glyclt[p] + na1[p] --> glyclt[c] + na1[c] B4067 GLYCLTtex glycolate transport via diffusion (extracellular to periplasm) glyclt[e] <==> glyclt[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLYCtex glycerol transport via diffusion (extracellular to periplasm) glyc[e] <==> glyc[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) GLYCTO2 Glycolate oxidase [c] : glyclt + q8 --> glx + q8h2 (B2979 AND B4467 AND B4468) GLYCTO3 Glycolate oxidase [c] : glyclt + mqn8 --> glx + mql8 (B2979 AND B4467 AND B4468) GLYCTO4 Glycolate oxidase [c] : 2dmmq8 + glyclt --> 2dmmql8 + glx (B2979 AND B4467 AND B4468) GLYCtpp glycerol transport via channel (periplasm) glyc[c] <==> glyc[p] B3927 (TRANS-RXN-131) GLYK glycerol kinase [c] : atp + glyc --> adp + glyc3p + h B3926 (GLYCEROL-KIN-RXN) ((RIGHT REMOVE PROTON)) GLYOX hydroxyacylglutathione hydrolase [c] : h2o + lgt-S --> gthrd + h + lac-D B0212 (GLYOXII-RXN) ((RIGHT REMOVE PROTON)) GLYOX3 glyoxalase III [c] : h2o + mthgxl --> h + lac-D (GLYOXIII-RXN) ((RIGHT REMOVE PROTON)) GLYt2pp glycine transport in via proton symport (periplasm) gly[p] + h[p] --> gly[c] + h[c] (B1801 OR B4208) (TRANS-RXN-62B) GLYt4pp glycine transport in via sodium symport (periplasm) gly[p] + na1[p] --> gly[c] + na1[c] B0007 GLYtex Glycine transport via diffusion (extracellular to periplasm) gly[e] <==> gly[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GLYTRS Glycyl-tRNA synthetase [c] : atp + gly + trnagly --> amp + glytrna + ppi (B3559 AND B3560) (GLYCINE--TRNA-LIGASE-RXN) GMAND GDP-D-mannose dehydratase [c] : gdpmann --> gdpddman + h2o B2053 (GDPMANDEHYDRA-RXN) GMHEPAT D-glycero-D-manno-hepose 1-phosphate adenyltransferase [c] : atp + gmhep1p + h --> adphep-DD + ppi B3052 (RXN0-4342) ((LEFT REMOVE PROTON)) GMHEPK D-glycero-D-manno-heptose 7-phosphate kinase [c] : atp + gmhep7p --> adp + gmhep17bp + h B3052 (RXN0-4341) ((RIGHT REMOVE PROTON)) GMHEPPA "D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase" [c] : gmhep17bp + h2o --> gmhep1p + pi B0200 GMPR GMP reductase [c] : gmp + (2) h + nadph --> imp + nadp + nh4 B0104 (GMP-REDUCT-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) GMPS2 GMP synthase [c] : atp + gln-L + h2o + xmp --> amp + glu-L + gmp + (2) h + ppi B2507 (GMP-SYN-GLUT-RXN) ((RIGHT REMOVE PROTON)) GMPtex GMP transport via diffusion (extracellular to periplasm) gmp[e] <==> gmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GND phosphogluconate dehydrogenase [c] : 6pgc + nadp --> co2 + nadph + ru5p-D B2029 (6PGLUCONDEHYDROG-RXN) (:EXPANDED-RXN-MATCH) GNK gluconokinase [c] : atp + glcn --> 6pgc + adp + h (B4268 OR B3437) (GLUCONOKIN-RXN) ((RIGHT REMOVE PROTON)) GOFUCR GDP-4-oxo-L-fucose reductase [c] : gdpofuc + h + nadph --> gdpfuc + nadp B2052 (:UNMAPPED-CPDS) GP4GH Gp4G hydrolase [c] : gp4g + h2o --> (2) gdp + (2) h B0049 GPDDA1 Glycerophosphodiester phosphodiesterase (Glycerophosphocholine) [c] : g3pc + h2o --> chol + glyc3p + h B3449 (3.1.4.2-RXN) (:METACYC (RIGHT REMOVE PROTON)) GPDDA1pp Glycerophosphodiester phosphodiesterase (Glycerophosphocholine) [p] : g3pc + h2o --> chol + glyc3p + h B2239 GPDDA2 Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine) [c] : g3pe + h2o --> etha + glyc3p + h B3449 GPDDA2pp Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine) [p] : g3pe + h2o --> etha + glyc3p + h B2239 GPDDA3 Glycerophosphodiester phosphodiesterase (Glycerophosphoserine) [c] : g3ps + h2o --> glyc3p + h + ser-L B3449 (:UNMAPPED-CPDS) GPDDA3pp Glycerophosphodiester phosphodiesterase (Glycerophosphoserine) [p] : g3ps + h2o --> glyc3p + h + ser-L B2239 (:UNMAPPED-CPDS) GPDDA4 Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol) [c] : g3pg + h2o --> glyc + glyc3p + h B3449 GPDDA4pp Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol) [p] : g3pg + h2o --> glyc + glyc3p + h B2239 GPDDA5 Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol) [c] : g3pi + h2o --> glyc3p + h + inost B3449 (3.1.4.44-RXN) (:METACYC (RIGHT REMOVE PROTON)) GPDDA5pp Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol) [p] : g3pi + h2o --> glyc3p + h + inost B2239 GRTT geranyltranstransferase [c] : grdp + ipdp --> frdp + ppi B0421 (FPPSYN-RXN) GRXR glutaredoxin reductase [c] : grxox + (2) gthrd --> grxrd + gthox (B1064 OR B3610 OR B0849 OR B1654) (PRODISULFREDUCT-A-RXN) (:EXPANDED-RXN-MATCH) GSNK guanosine kinase [c] : atp + gsn --> adp + gmp + h B0477 (GUANOSINEKIN-RXN) ((RIGHT REMOVE PROTON)) GSNt2pp guanosine transport in via proton symport (periplasm) gsn[p] + h[p] --> gsn[c] + h[c] B2964 (TRANS-RXN-108) (:EXPANDED-RXN-MATCH) GSNtex guanosine transport via diffusion (extracellular to periplasm) gsn[e] <==> gsn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GSPMDA Glutathionylspermidine amidase [c] : gtspmd + h2o --> gthrd + spmd B2988 (GSPAMID-RXN) GSPMDS Glutathionylspermidine synthetase [c] : atp + gthrd + spmd --> adp + gtspmd + h + pi B2988 (GSPSYN-RXN) ((RIGHT REMOVE PROTON)) GTHOr glutathione oxidoreductase [c] : gthox + h + nadph <==> (2) gthrd + nadp B3500 (GLUTATHIONE-REDUCT-NADPH-RXN) GTHOXtex glutathione (ox) transport via diffusion (extracellular to periplasm) gthox[e] <==> gthox[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GTHRDabc2pp glutathione export via ABC system (cytoplasm to periplasm) atp[c] + gthrd[c] + h2o[c] --> adp[c] + gthrd[p] + h[c] + pi[c] (B0886 AND B0887) GTHRDabcpp Reduced glutathione via ABC system (periplasm) atp[c] + gthrd[p] + h2o[c] --> adp[c] + gthrd[c] + h[c] + pi[c] (B0829 AND B0830 AND B0831 AND B0832) GTHRDHpp glutathione hydralase (periplasmic) [p] : gthrd + h2o --> cgly + glu-L B3447 (:UNMAPPED-CPDS) GTHRDtex glutathione transport via diffusion (extracellular to periplasm) gthrd[e] <==> gthrd[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GTHS glutathione synthetase [c] : atp + glucys + gly --> adp + gthrd + h + pi B2947 (GLUTATHIONE-SYN-RXN) ((RIGHT REMOVE PROTON)) GTPCI GTP cyclohydrolase I [c] : gtp + h2o --> ahdt + for + h B2153 (GTP-CYCLOHYDRO-I-RXN) ((RIGHT REMOVE PROTON)) GTPCII2 GTP cyclohydrolase II (25drapp) [c] : gtp + (3) h2o --> 25drapp + for + (2) h + ppi B1277 (GTP-CYCLOHYDRO-II-RXN) ((RIGHT REMOVE PROTON)) GTPDPDP "guanosine-5'-triphosphate,3'-diphosphate diphosphatase" [c] : gdptp + h2o --> h + pi + ppgpp B3779 (PPPGPPHYDRO-RXN) ((RIGHT REMOVE PROTON)) GTPDPK GTP diphosphokinase [c] : atp + gtp --> amp + gdptp + h B2784 (GTPPYPHOSKIN-RXN) ((RIGHT REMOVE PROTON)) GTPHs spontaneous GTP amine hydrolysis [c] : gtp + h + h2o --> nh4 + xtp GTPtex GTP transport via diffusion (extracellular to periplasm) gtp[e] <==> gtp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) GUAD guanine deaminase [c] : gua + h + h2o --> nh4 + xan B2883 (GUANINE-DEAMINASE-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) GUAPRT guanine phosphoribosyltransferase [c] : gua + prpp --> gmp + ppi (B0238 OR B0125) (GUANPRIBOSYLTRAN-RXN) GUAt2pp guanine transport in via proton symport (periplasm) gua[p] + h[p] --> gua[c] + h[c] B3654 GUAtex Guanine transport via diffusion (extracellular to periplasm) gua[e] <==> gua[p] B0411 GUAtpp Guanine transport via diffusion (periplasm) gua[p] <==> gua[c] GUI1 glucuronate isomerase (D-glucuronate) [c] : glcur <==> fruur B3092 (GLUCUROISOM-RXN) GUI2 glucuronate isomerase (D-galacturonate) [c] : galur <==> tagur B3092 (GALACTUROISOM-RXN) GUR1PPpp Glucuronate 1-phosphate phosphatase (periplasm) [p] : glcur1p + h2o --> glcur + pi H2O2tex hydrogen peroxide transport via diffusion (external) h2o2[e] <==> h2o2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) H2Otex H2O transport via diffusion (extracellular to periplasm) h2o[e] <==> h2o[p] (B1377 OR B0929 OR B2215 OR B0241 OR B1319 OR B0957 OR B3875) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) H2Otpp H2O transport via diffusion (periplasm) h2o[p] <==> h2o[c] B0875 (TRANS-RXN-145) H2SO Hydrogen sulfide oxidation [c] : h2s + (2) o2 --> (2) h + so4 H2St1pp h2s transport (periplasm) h2s[c] --> h2s[p] (:DIFFUSION) (:INNER-MEMBRANE-DIFFUSION) H2Stex h2s transport via diffusion (extracellular to periplasm) h2s[e] <==> h2s[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) H2tex hydrogen transport via diffusion (extracellular to periplasm) h2[e] <==> h2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) H2tpp hydrogen transport diffusion (periplasm) h2[p] <==> h2[c] (:DIFFUSION) (:INNER-MEMBRANE-DIFFUSION) HACD1i 3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA) [c] : 3hbcoa + nad --> aacoa + h + nadh (B3846 OR B2341) (1.1.1.211-RXN OHACYL-COA-DEHYDROG-RXN) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) HACD2i 3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA) [c] : 3hhcoa + nad --> 3ohcoa + h + nadh (B3846 OR B2341) HACD3i 3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA) [c] : 3hocoa + nad --> 3oocoa + h + nadh (B2341 OR B3846) (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HACD4i 3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA) [c] : 3hdcoa + nad --> 3odcoa + h + nadh (B3846 OR B2341) (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HACD5i 3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA) [c] : 3hddcoa + nad --> 3oddcoa + h + nadh (B3846 OR B2341) (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HACD6i 3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA) [c] : 3htdcoa + nad --> 3otdcoa + h + nadh (B3846 OR B2341) (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HACD7i 3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA) [c] : 3hhdcoa + nad --> 3ohdcoa + h + nadh (B3846 OR B2341) HACD8i 3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA) [c] : 3hodcoa + nad --> 3oodcoa + h + nadh (B3846 OR B2341) (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HBZOPT Hydroxybenzoate octaprenyltransferase [c] : 4hbz + octdp --> 3ophb + ppi B4040 (4OHBENZOATE-OCTAPRENYLTRANSFER-RXN) HCINNMt2rpp "3-hydroxycinnamic acid transport via proton symport, reversible (periplasm)" 3hcinnm[p] + h[p] <==> 3hcinnm[c] + h[c] B0353 (:UNMAPPED-CPDS) HCINNMtex 3-hydroxycinnamic acid transport via diffusion (extracellular to periplasm) 3hcinnm[e] <==> 3hcinnm[p] (B0241 OR B0929 OR B1377 OR B2215) (:UNMAPPED-CPDS) HCO3E HCO3 equilibration reaction [c] : co2 + h2o <==> h + hco3 (B0339 OR B0126) HCYSMT homocysteine S-methyltransferase [c] : amet + hcys-L --> ahcys + h + met-L B0261 (HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN) ((RIGHT REMOVE PROTON)) HCYSMT2 Homocysteine Methyltransferase [c] : hcys-L + mmet --> h + (2) met-L B0261 (MMUM-RXN) ((RIGHT REMOVE PROTON)) HDCAtexi Hexadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) hdca[e] --> hdca[p] B2344 (RXN0-1802) (:EXPANDED-RXN-MATCH) HDCEAtexi Hexadecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) hdcea[e] --> hdcea[p] B2344 (RXN0-1802) (:EXPANDED-RXN-MATCH) HDCOAI hexadecenoyl-coa cis-trans isomerization [c] : hdcoa --> hdd2coa B3846 (ENOYL-COA-DELTA-ISOM-RXN) HEMEOS Heme O synthase [c] : frdp + h2o + pheme --> hemeO + ppi B0428 (HEMEOSYN-RXN) HEPK1 LPS heptose kinase I (LPS core synthesis) [c] : atp + hhlipa --> adp + h + phhlipa B3630 (:UNMAPPED-CPDS) HEPK2 LPS heptose kinase II (LPS core synthesis) [c] : atp + hphhlipa --> adp + h + phphhlipa B3625 (:UNMAPPED-CPDS) HEPT1 heptosyltransferase I (LPS core synthesis) [c] : adphep-LD + lipa --> adp + h + hlipa B3621 (RXN0-5118) ((RIGHT REMOVE PROTON)) HEPT2 heptosyltransferase II (LPS core synthesis) [c] : adphep-LD + hlipa --> adp + h + hhlipa B3620 (RXN0-5061) ((RIGHT REMOVE PROTON)) HEPT3 heptosyltransferase III (LPS core synthesis) [c] : adphep-LD + phhlipa --> adp + h + hphhlipa B3632 (:UNMAPPED-CPDS) HEPT4 heptosyltransferase IV (LPS core synthesis) [c] : adphep-LD + gggagicolipa --> adp + colipa + h B3623 (:UNMAPPED-CPDS) HETZK hydroxyethylthiazole kinase [c] : 4mhetz + atp --> 4mpetz + adp + h B2104 (THIAZOLSYN3-RXN) ((RIGHT REMOVE PROTON)) HEX1 hexokinase (D-glucose:ATP) [c] : atp + glc-D --> adp + g6p + h B2388 (GLUCOKIN-RXN) ((RIGHT REMOVE PROTON)) HEX4 hexokinase (D-mannose:ATP) [c] : atp + man --> adp + h + man6p (MANNKIN-RXN) ((RIGHT REMOVE PROTON)) HEX7 hexokinase (D-fructose:ATP) [c] : atp + fru --> adp + f6p + h B0394 (FRUCTOKINASE-RXN) ((RIGHT REMOVE PROTON)) HEXt2rpp "hexanoate transport via proton symport, reversible (periplasm)" h[p] + hxa[p] <==> h[c] + hxa[c] B2223 HG2abcpp Mercury (Hg+2) ABC transporter (periplasm) atp[c] + h2o[c] + hg2[c] --> adp[c] + h[c] + hg2[p] + pi[c] B3469 HG2t3pp mercury (Hg+2) transport out via proton antiport (periplasm) h[p] + hg2[c] --> h[c] + hg2[p] B3915 HG2tex mercury (Hg+2) transport via diffusion (extracellular to periplasm) hg2[e] <==> hg2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) HISabcpp L-histidine transport via ABC system (periplasm) atp[c] + h2o[c] + his-L[p] --> adp[c] + h[c] + his-L[c] + pi[c] (B2309 AND B2307 AND B2306 AND B2308) (ABC-14-RXN) ((RIGHT REMOVE PROTON)) HISt2rpp L-histidine reversible transport via proton symport (periplasm) h[p] + his-L[p] <==> h[c] + his-L[c] B0112 HISTD histidinol dehydrogenase [c] : h2o + histd + (2) nad --> (3) h + his-L + (2) nadh B2020 HIStex L-histidine transport via diffusion (extracellular to periplasm) his-L[e] <==> his-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) HISTP histidinol-phosphatase [c] : h2o + hisp --> histd + pi B2022 (HISTIDPHOS-RXN) HISTRS Histidyl-tRNA synthetase [c] : atp + his-L + trnahis --> amp + histrna + ppi B2514 (HISTIDINE--TRNA-LIGASE-RXN) HKNDDH "2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase" [c] : h2o + hkndd --> h + op4en + succ B0349 (MHPCHYDROL-RXN) ((RIGHT REMOVE PROTON)) HKNTDH 2-hydroxy-6-ketononotrienedioate hydrolase [c] : h2o + hkntd --> fum + h + op4en B0349 (:UNMAPPED-CPDS) HMBS hydroxymethylbilane synthase [c] : h2o + (4) ppbng --> hmbil + (4) nh4 B3805 (OHMETHYLBILANESYN-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) HMPK1 hydroxymethylpyrimidine kinase (ATP) [c] : 4ahmmp + atp --> 4ampm + adp + h (B2103 OR B2418) (OHMETPYRKIN-RXN) ((RIGHT REMOVE PROTON)) HOMt2pp L-homoserineserine efflux via proton symport h[p] + hom-L[c] --> h[c] + hom-L[p] (B0813 OR B3824) (TRANS-RXN-242) HOMtex L-homoserine transport via diffusion (extracellular to periplasm) hom-L[e] <==> hom-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) HOPNTAL 4-hydroxy-2-oxopentanoate aldolase [c] : 4h2opntn --> acald + pyr B0352 (MHPELY-RXN) HPPK2 6-hydroxymethyl-dihydropterin pyrophosphokinase [c] : 6hmhpt + atp --> 6hmhptpp + amp + h B0142 (H2PTERIDINEPYROPHOSPHOKIN-RXN) ((RIGHT REMOVE PROTON)) HPPPNDO "2,3-dihydroxypheylpropionate 1,2-dioxygenase" [c] : dhpppn + o2 --> h + hkndd B0348 (1.13.11.16-RXN) ((RIGHT REMOVE PROTON)) HPPPNt2rpp "3-(3-hydroxyphenyl)propionate transport via proton symport, reversible (periplasm)" 3hpppn[p] + h[p] <==> 3hpppn[c] + h[c] B0353 (TRANS-RXN-61) HPPPNtex 3-(3-hydroxyphenyl)propionate transport via diffusion (extracellular to periplasm) 3hpppn[e] <==> 3hpppn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) HPYRI hydroxypyruvate isomerase [c] : hpyr <==> 2h3oppan B0508 (RXN0-305) HPYRRx Hydroxypyruvate reductase (NADH) [c] : h + hpyr + nadh --> glyc-R + nad (B1033 OR B3553) (GLYCERATE-DEHYDROGENASE-RXN) (:METACYC (LEFT REMOVE PROTON)) HPYRRy Hydroxypyruvate reductase (NADPH) [c] : h + hpyr + nadph --> glyc-R + nadp (B3553 OR B1033) (RXN0-300) ((LEFT REMOVE PROTON)) HSDy homoserine dehydrogenase (NADPH) [c] : hom-L + nadp <==> aspsa + h + nadph (B3940 OR B0002) (HOMOSERDEHYDROG-RXN) (:EXPANDED-RXN-MATCH) HSK homoserine kinase [c] : atp + hom-L --> adp + h + phom B0003 (HOMOSERKIN-RXN) ((RIGHT REMOVE PROTON)) HSST homoserine O-succinyltransferase [c] : hom-L + succoa --> coa + suchms B4013 (HOMSUCTRAN-RXN) HSTPT histidinol-phosphate transaminase [c] : glu-L + imacp --> akg + hisp B2021 (HISTAMINOTRANS-RXN) Htex proton transport via diffusion (extracellular to periplasm) h[e] <==> h[p] (B0929 OR B1377 OR B2215 OR B0241) (TRANS-RXN-90) ((LEFT REMOVE PROTON)) HXAND hypoxanthine dehydrogenase [c] : h2o + hxan + nad --> h + nadh + xan (B2866 AND B2867 AND B2868) (RXN-7682) (:METACYC) HXAtex Hexanoate transport via diffusion (extracellular to periplasm) hxa[e] <==> hxa[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) HXCT Acetyl-CoA:hexanoate-CoA transferase [c] : accoa + hxa --> ac + hxcoa (B2221 AND B2222) HXPRT hypoxanthine phosphoribosyltransferase (Hypoxanthine) [c] : hxan + prpp --> imp + ppi (B0238 OR B0125) (HYPXPRIBOSYLTRAN-RXN HYPOXANPRIBOSYLTRAN-RXN) HYD1pp hydrogenase (ubiquinone-8: 2 protons) (periplasm) (2) h[c] + h2[c] + q8[c] --> (2) h[p] + q8h2[c] ((B0972 AND B0973 AND B0974) OR (B2994 AND B2997) OR (B2719 AND B2720 AND B2721 AND B2722 AND B2723 AND B2724)) HYD2pp Hydrogenase (menaquinone8: 2 protons) (periplasm) (2) h[c] + h2[c] + mqn8[c] --> (2) h[p] + mql8[c] ((B0972 AND B0973 AND B0974) OR (B2994 AND B2997)) (1.12.5.1-RXN) (:METACYC (LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) HYD3pp Hydrogenase (Demethylmenaquinone-8: 2 protons) (periplasm) 2dmmq8[c] + (2) h[c] + h2[c] --> 2dmmql8[c] + (2) h[p] ((B0972 AND B0973 AND B0974) OR (B2994 AND B2997)) HYPOE hypothetical enyme [c] : h2o + pyam5p --> pi + pydam HYXNtex Hypoxanthine transport via diffusion (extracellular to periplasm) hxan[e] <==> hxan[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) HYXNtpp Hypoxanthine transport (periplasm) hxan[p] <==> hxan[c] ICDHyr isocitrate dehydrogenase (NADP) [c] : icit + nadp <==> akg + co2 + nadph B1136 (ISOCITDEH-RXN) ICHORS isochorismate synthase [c] : chor <==> ichor B2265 (ISOCHORSYN-RXN) ICHORSi Isochorismate Synthase [c] : chor --> ichor B0593 (ISOCHORSYN-RXN) ICHORT isochorismatase [c] : h2o + ichor --> 23ddhb + pyr B0595 (ISOCHORMAT-RXN) ICL Isocitrate lyase [c] : icit --> glx + succ B4015 (ISOCIT-CLEAV-RXN) IDOND L-idonate 5-dehydrogenase [c] : 5dglcn + h + nadh <==> idon-L + nad B4267 (IDONDEHYD-RXN) ((LEFT REMOVE PROTON)) IDOND2 L-indonate 5-dehydrogenase (NADP) [c] : 5dglcn + h + nadph --> idon-L + nadp B4267 (L-IDONATE-2-DEHYDROGENASE-RXN) (:METACYC (LEFT REMOVE PROTON)) IDONt2rpp "L-idonate transport via proton symport, reversible (periplasm)" h[p] + idon-L[p] <==> h[c] + idon-L[c] B4265 (TRANS-RXN-181) IDONtex L-idonate transport via diffusion (extracellular to periplasm) idon-L[e] <==> idon-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) IG3PS Imidazole-glycerol-3-phosphate synthase [c] : gln-L + prlp --> aicar + eig3p + glu-L + h (B2023 AND B2025) (GLUTAMIDOTRANS-RXN) ((RIGHT REMOVE PROTON)) IGPDH imidazoleglycerol-phosphate dehydratase [c] : eig3p --> h2o + imacp B2022 (IMIDPHOSDEHYD-RXN) IGPS indole-3-glycerol-phosphate synthase [c] : 2cpr5p + h --> 3ig3p + co2 + h2o B1262 (IGPSYN-RXN) ((LEFT REMOVE PROTON)) ILEabcpp L-isoleucine transport via ABC system (periplasm) atp[c] + h2o[c] + ile-L[p] --> adp[c] + h[c] + ile-L[c] + pi[c] (B3454 AND B3455 AND B3457 AND B3460 AND B3456) (ABC-15-RXN) ((RIGHT REMOVE PROTON)) ILEt2rpp L-isoleucine reversible transport via proton symport (periplasm) h[p] + ile-L[p] <==> h[c] + ile-L[c] B0401 ILETA isoleucine transaminase [c] : akg + ile-L <==> 3mop + glu-L B3770 (BRANCHED-CHAINAMINOTRANSFERILEU-RXN) ILEtex L-isoleucine transport via diffusion (extracellular to periplasm) ile-L[e] <==> ile-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ILETRS Isoleucyl-tRNA synthetase [c] : atp + ile-L + trnaile --> amp + iletrna + ppi B0026 (ISOLEUCINE--TRNA-LIGASE-RXN) IMPC IMP cyclohydrolase [c] : h2o + imp <==> fprica B4006 (IMPCYCLOHYDROLASE-RXN) IMPD IMP dehydrogenase [c] : h2o + imp + nad --> h + nadh + xmp B2508 (IMP-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) IMPtex IMP transport via diffusion (extracellular to periplasm) imp[e] <==> imp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) INDOLEt2pp "Indole transport via proton symport, irreversible (periplasm)" h[c] + indole[c] --> h[p] + indole[p] (B3265 AND B3266) (TRANS-RXN-142) INDOLEt2rpp "Indole transport via proton symport, reversible (periplasm)" h[p] + indole[p] <==> h[c] + indole[c] B3161 (TRANS-RXN-142) INDOLEtex Indole transport via diffusion (extracellular to periplasm) indole[e] <==> indole[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) INOSTt4pp Na+/myo-inositol symporter (periplasm) inost[p] + na1[p] --> inost[c] + na1[c] B3679 INSH Inosine hydrolase [c] : h2o + ins --> hxan + rib-D B0030 (INOSINE-NUCLEOSIDASE-RXN) INSK insosine kinase [c] : atp + ins --> adp + h + imp B0477 (INOSINEKIN-RXN) ((RIGHT REMOVE PROTON)) INSt2pp inosine transport in via proton symport (periplasm) h[p] + ins[p] --> h[c] + ins[c] B2964 (TRANS-RXN-108G) INSt2rpp "inosine transport in via proton symport, reversible (periplasm)" h[p] + ins[p] <==> h[c] + ins[c] B2406 (TRANS-RXN-108G) INStex inosine transport via diffusion (extracellular to periplasm) ins[e] <==> ins[p] B0411 INSTtex inositol transport via diffusion (extracellular to periplasm) inost[e] <==> inost[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) IPDDI isopentenyl-diphosphate D-isomerase [c] : ipdp <==> dmpp B2889 (IPPISOM-RXN) IPDPS 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (ipdp) [c] : h + h2mb4p + nadh --> h2o + ipdp + nad B0029 (ISPH2-RXN) (:EXPANDED-RXN-MATCH) IPMD 3-isopropylmalate dehydrogenase [c] : 3c2hmp + nad --> 3c4mop + h + nadh B0073 (3-ISOPROPYLMALDEHYDROG-RXN) IPPMIa 3-isopropylmalate dehydratase [c] : 3c2hmp <==> 2ippm + h2o (B0071 AND B0072) (:UNMAPPED-CPDS) IPPMIb 2-isopropylmalate hydratase [c] : 2ippm + h2o <==> 3c3hmp (B0071 AND B0072) (:UNMAPPED-CPDS) IPPS 2-isopropylmalate synthase [c] : 3mob + accoa + h2o --> 3c3hmp + coa + h B0074 (2-ISOPROPYLMALATESYN-RXN) ((RIGHT REMOVE PROTON)) ISETACabcpp isethionate transport via ABC system (periplasm) atp[c] + h2o[c] + isetac[p] --> adp[c] + h[c] + isetac[c] + pi[c] ((B0365 AND B0366 AND B0367) OR (B0936 AND B0933 AND B0934)) ISETACtex isethionate transport via diffusion (extracellular to periplasm) isetac[e] <==> isetac[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) K2L4Aabcpp KDO(2)-lipid IV A transport via ABC system (periplasm) atp[c] + h2o[c] + kdo2lipid4[c] --> adp[c] + h[c] + kdo2lipid4[p] + pi[c] B0914 K2L4Atex KDO(2)-lipid IV A transport via vector (periplasm to extracellular) kdo2lipid4[p] --> kdo2lipid4[e] Kabcpp Potassium ABC transporter (periplasm) atp[c] + h2o[c] + k[p] --> adp[c] + h[c] + k[c] + pi[c] (B0698 AND B0697 AND B0696) (TRANS-RXN-2) ((RIGHT REMOVE PROTON)) KARA1 "ketol-acid reductoisomerase (2,3-dihydroxy-3-methylbutanoate)" [c] : 23dhmb + nadp <==> alac-S + h + nadph B3774 (ACETOLACTREDUCTOISOM-RXN) KARA2 ketol-acid reductoisomerase (2-Acetolactate) [c] : 2ahbut + h + nadph <==> 23dhmp + nadp B3774 (ACETOOHBUTREDUCTOISOM-RXN) ((LEFT REMOVE PROTON)) KAS14 beta-ketoacyl-ACP synthase [c] : acACP + h + malACP --> ACP + actACP + co2 (B2323 OR B1095) (3-OXOACYL-ACP-SYNTH-RXN 3-OXOACYL-ACP-SYNTH-BASE-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) KAS15 beta-ketoacyl-ACP synthase (2) [c] : accoa + h + malACP --> actACP + co2 + coa B1091 (3-OXOACYL-ACP-COA-SYNTHIII-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) KAT1 3-ketoacyl-CoA thiolase [c] : aacoa + coa --> (2) accoa (B2342 OR B3845) (ACETYL-COA-ACETYLTRANSFER-RXN) KAT2 3-ketoacyl-CoA thiolase [c] : 3ohcoa + coa --> accoa + btcoa (B3845 OR B2342) KAT3 3-ketoacyl-CoA thiolase [c] : 3oocoa + coa --> accoa + hxcoa (B2342 OR B3845) KAT4 3-ketoacyl-CoA thiolase [c] : 3odcoa + coa --> accoa + occoa (B2342 OR B3845) KAT5 3-ketoacyl-CoA thiolase [c] : 3oddcoa + coa --> accoa + dcacoa (B2342 OR B3845) (KETOACYLCOATHIOL-RXN RXN-3641) KAT6 3-ketoacyl-CoA thiolase [c] : 3otdcoa + coa --> accoa + ddcacoa (B3845 OR B2342) KAT7 3-ketoacyl-CoA thiolase [c] : 3ohdcoa + coa --> accoa + tdcoa (B3845 OR B2342) (2.3.1.155-RXN) (:METACYC) KAT8 3-ketoacyl-CoA thiolase [c] : 3oodcoa + coa --> accoa + pmtcoa (B3845 OR B2342) KDOCT2 3-deoxy-manno-octulosonate cytidylyltransferase [c] : ctp + kdo --> ckdo + ppi B0918 (CPM-KDOSYNTH-RXN) KDOPP 3-deoxy-manno-octulosonate-8-phosphatase [c] : h2o + kdo8p --> kdo + pi B3198 (KDO-8PPHOSPHAT-RXN) KDOPS 3-deoxy -D-manno-octulosonic -acid 8-phosphate synthase [c] : ara5p + h2o + pep --> kdo8p + pi B1215 (KDO-8PSYNTH-RXN) KG6PDC 3-keto-L-gulonate 6-phosphate decarboxylase [c] : 3dhgulnp + h --> co2 + xu5p-L (B4196 OR B3581) (RXN0-705) ((LEFT REMOVE PROTON)) Kt2pp potassium transport in via proton symport (periplasm) h[p] + k[p] --> h[c] + k[c] (B1250 OR B3747 OR (B1291 AND B3290 AND B3849) OR (B1291 AND B3290 AND B1363)) (TRANS-RXN-3) Kt3pp potassium transport out via proton antiport (periplasm) h[p] + k[c] --> h[c] + k[p] (B3350 OR B0047 OR B1216 OR B0842) (TRANS-RXN-42) Ktex potassium transport via diffusion (extracellular to periplasm) k[e] <==> k[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) LA4NTpp "4-amino-4-deoxy-L-arabinotransferase (LPS lipid A modification, periplasmic face of membrane))" [p] : colipa + uLa4n --> acolipa + udcpp B2257 (:UNMAPPED-CPDS) LACZ b-galactosidase [c] : h2o + lcts --> gal + glc-D B0344 (BETAGALACTOSID-RXN) LACZpp b-galactosidase [p] : h2o + lcts --> gal + glc-D B2132 LADGMDH L-alanyl-gamma-D-glutamyl-meso-diaminopimelate hydrolase [c] : LalaDgluMdap + h2o --> 26dap-M + LalaDglu B1326 (RXN0-961) LALDO2x D-Lactaldehyde:NAD+ 1-oxidoreductase [c] : h + mthgxl + nadh --> lald-D + nad B3945 (D-LACTALDEHYDE-DEHYDROGENASE-RXN) ((LEFT REMOVE PROTON)) LALGP L-alanyl-gamma-L-glutamate peptidase [c] : LalaLglu + h2o --> ala-L + glu-L B0237 (:UNMAPPED-CPDS) LCADi lactaldehyde dehydrogenase [c] : h2o + lald-L + nad --> (2) h + lac-L + nadh B1415 (LACTALDDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) LCARR "lacaldehyde reductase (R-propane-1,2-diol forming)" [c] : h + lald-D + nadh <==> 12ppd-R + nad (:UNMAPPED-CPDS) LCARS "lacaldehyde reductase (S-propane-1,2-diol forming)" [c] : h + lald-L + nadh <==> 12ppd-S + nad B2799 (LACTALDREDUCT-RXN) ((LEFT REMOVE PROTON)) LCTSt3ipp Lactose transport via proton aniport (periplasm) h[p] + lcts[c] --> h[c] + lcts[p] (B2170 OR B0070 OR B1528) (TRANS-RXN-82) LCTStex Lactose transport via diffusion (extracellular to periplasm) lcts[e] <==> lcts[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) LCTStpp Lactose transport via proton symport (periplasm) h[p] + lcts[p] <==> h[c] + lcts[c] B0343 (TRANS-RXN-24) LDH_D D-lactate dehydrogenase [c] : lac-D + nad <==> h + nadh + pyr (B2133 OR B1380) (DLACTDEHYDROGNAD-RXN) ((RIGHT REMOVE PROTON)) LDH_D2 D-lactate dehydrogenase [c] : lac-D + q8 --> pyr + q8h2 B2133 (DLACTDEHYDROGFAD-RXN) LEUabcpp L-leucine transport via ABC system (periplasm) atp[c] + h2o[c] + leu-L[p] --> adp[c] + h[c] + leu-L[c] + pi[c] ((B3454 AND B3455 AND B3457 AND B3458 AND B3456) OR (B3454 AND B3455 AND B3457 AND B3460 AND B3456)) (ABC-35-RXN) ((RIGHT REMOVE PROTON)) LEUt2rpp L-leucine reversible transport via proton symport (periplasm) h[p] + leu-L[p] <==> h[c] + leu-L[c] B0401 LEUTAi leucine transaminase (irreversible) [c] : 4mop + glu-L --> akg + leu-L (B3770 OR B4054) (BRANCHED-CHAINAMINOTRANSFERLEU-RXN) LEUtex L-leucine transport via diffusion (extracellular to periplasm) leu-L[e] <==> leu-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) LEUTRS Leucyl-tRNA synthetase [c] : atp + leu-L + trnaleu --> amp + leutrna + ppi B0642 (LEUCINE--TRNA-LIGASE-RXN) LGTHL lactoylglutathione lyase [c] : gthrd + mthgxl --> lgt-S B1651 (GLYOXI-RXN) LIPAabcpp lipid A transport via ABC system (periplasm) atp[c] + h2o[c] + lipa[c] --> adp[c] + h[c] + lipa[p] + pi[c] B0914 (3.6.3.39-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) LIPACabcpp lipid (cold) A transport via ABC system (periplasm) atp[c] + h2o[c] + lipa_cold[c] --> adp[c] + h[c] + lipa_cold[p] + pi[c] B0914 LIPAHT2ex core oligosaccharide lipid A:hexadecanoate transferase (n-C16:0) (extracellular membrane) [e] : colipa + h + hdca --> h2o + hacolipa B0622 (:UNMAPPED-CPDS) LIPAHTex Lipid A:hexadecanoate transferase (n-C16:0) (extracellular membrane) [e] : h + hdca + lipa --> h2o + halipa B0622 LIPAtex lipid A transport via vector (periplasm to extracellular) lipa[p] --> lipa[e] (RXN0-1683) (:EXPANDED-RXN-MATCH) L-LACD2 L-Lactate dehydrogenase (ubiquinone) [c] : lac-L + q8 --> pyr + q8h2 B3605 L-LACD3 L-Lactate dehydrogenase (menaquinone) [c] : lac-L + mqn8 --> mql8 + pyr B3605 (L-LACTDEHYDROGFMN-RXN) (:EXPANDED-RXN-MATCH) L-LACt2rpp L-lactate reversible transport via proton symport (periplasm) h[p] + lac-L[p] <==> h[c] + lac-L[c] (B3603 OR B2975) (TRANS-RXN-104) L-LACtex L-lactate transport via diffusion (extracellular to periplasm) lac-L[e] <==> lac-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) LPADSS Lipid A disaccaride synthase [c] : lipidX + u23ga --> h + lipidAds + udp B0182 (LIPIDADISACCHARIDESYNTH-RXN) ((RIGHT REMOVE PROTON)) LPLIPAL1A120pp "Lysophospholipase L1 (2-acylglycerophosphotidate, n-C12:0) (periplasm)" [p] : 1ddecg3p + h2o --> ddca + glyc3p + h B0494 LPLIPAL1A140pp "Lysophospholipase L1 (2-acylglycerophosphotidate, n-C14:0) (periplasm)" [p] : 1tdecg3p + h2o --> glyc3p + h + ttdca B0494 LPLIPAL1A141pp "Lysophospholipase L1 (2-acylglycerophosphotidate, n-C14:1) (periplasm)" [p] : 1tdec7eg3p + h2o --> glyc3p + h + ttdcea B0494 (:UNMAPPED-CPDS) LPLIPAL1A160pp "Lysophospholipase L1 (2-acylglycerophosphotidate, n-C16:0) (periplasm)" [p] : 1hdecg3p + h2o --> glyc3p + h + hdca B0494 LPLIPAL1A161pp "Lysophospholipase L1 (2-acylglycerophosphotidate, n-C16:1) (periplasm)" [p] : 1hdec9eg3p + h2o --> glyc3p + h + hdcea B0494 LPLIPAL1A180pp "Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:0) (periplasm)" [p] : 1odecg3p + h2o --> glyc3p + h + ocdca B0494 LPLIPAL1A181pp "Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:1) (periplasm)" [p] : 1odec11eg3p + h2o --> glyc3p + h + ocdcea B0494 LPLIPAL1E120pp "Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C12:0) (periplasm)" [p] : 1agpe120 + h2o --> ddca + g3pe + h B0494 (:UNMAPPED-CPDS) LPLIPAL1E140pp "Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C14:0) (periplasm)" [p] : 1agpe140 + h2o --> g3pe + h + ttdca B0494 (:UNMAPPED-CPDS) LPLIPAL1E141pp "Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C14:1) (periplasm)" [p] : 1agpe141 + h2o --> g3pe + h + ttdcea B0494 (:UNMAPPED-CPDS) LPLIPAL1E160pp "Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C16:0) (periplasm)" [p] : 1agpe160 + h2o --> g3pe + h + hdca B0494 LPLIPAL1E161pp "Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C16:1) (periplasm)" [p] : 1agpe161 + h2o --> g3pe + h + hdcea B0494 LPLIPAL1E180pp "Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C18:0) (periplasm)" [p] : 1agpe180 + h2o --> g3pe + h + ocdca B0494 (:UNMAPPED-CPDS) LPLIPAL1E181pp "Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C18:1) (periplasm)" [p] : 1agpe181 + h2o --> g3pe + h + ocdcea B0494 LPLIPAL1G120pp "Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C12:0) (periplasm)" [p] : 1agpg120 + h2o --> ddca + g3pg + h B0494 (:UNMAPPED-CPDS) LPLIPAL1G140pp "Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C14:0) (periplasm)" [p] : 1agpg140 + h2o --> g3pg + h + ttdca B0494 (:UNMAPPED-CPDS) LPLIPAL1G141pp "Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C14:1) (periplasm)" [p] : 1agpg141 + h2o --> g3pg + h + ttdcea B0494 (:UNMAPPED-CPDS) LPLIPAL1G160pp "Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C16:0) (periplasm)" [p] : 1agpg160 + h2o --> g3pg + h + hdca B0494 (:UNMAPPED-CPDS) LPLIPAL1G161pp "Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C16:1) (periplasm)" [p] : 1agpg161 + h2o --> g3pg + h + hdcea B0494 (:UNMAPPED-CPDS) LPLIPAL1G180pp "Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C18:0) (periplasm)" [p] : 1agpg180 + h2o --> g3pg + h + ocdca B0494 (:UNMAPPED-CPDS) LPLIPAL1G181pp "Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C18:1) (periplasm)" [p] : 1agpg181 + h2o --> g3pg + h + ocdcea B0494 LPLIPAL2A120 "Lysophospholipase L2 (2-acylglycerophosphotidate, n-C12:0)" [c] : 2ddecg3p + h2o --> ddca + glyc3p + (2) h B3825 (:UNMAPPED-CPDS) LPLIPAL2A140 "Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:0)" [c] : 2tdecg3p + h2o --> glyc3p + (2) h + ttdca B3825 (:UNMAPPED-CPDS) LPLIPAL2A141 "Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:1)" [c] : 2tdec7eg3p + h2o --> glyc3p + (2) h + ttdcea B3825 (:UNMAPPED-CPDS) LPLIPAL2A160 "Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:0)" [c] : 2hdecg3p + h2o --> glyc3p + (2) h + hdca B3825 (:UNMAPPED-CPDS) LPLIPAL2A161 "Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:1)" [c] : 2hdec9eg3p + h2o --> glyc3p + (2) h + hdcea B3825 (:UNMAPPED-CPDS) LPLIPAL2A180 "Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:0)" [c] : 2odecg3p + h2o --> glyc3p + (2) h + ocdca B3825 (:UNMAPPED-CPDS) LPLIPAL2A181 "Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:1)" [c] : 2odec11eg3p + h2o --> glyc3p + (2) h + ocdcea B3825 (:UNMAPPED-CPDS) LPLIPAL2ATE120 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C12:0)" [c] : 2agpe120 + pg120 --> apg120 + g3pe B3825 LPLIPAL2ATE140 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:0)" [c] : 2agpe140 + pg140 --> apg140 + g3pe B3825 LPLIPAL2ATE141 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:1)" [c] : 2agpe141 + pg141 --> apg141 + g3pe B3825 LPLIPAL2ATE160 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:0)" [c] : 2agpe160 + pg160 --> apg160 + g3pe B3825 LPLIPAL2ATE161 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:1)" [c] : 2agpe161 + pg161 --> apg161 + g3pe B3825 LPLIPAL2ATE180 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:0)" [c] : 2agpe180 + pg180 --> apg180 + g3pe B3825 LPLIPAL2ATE181 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:1)" [c] : 2agpe181 + pg181 --> apg181 + g3pe B3825 LPLIPAL2ATG120 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C12:0)" [c] : 2agpg120 + pg120 --> apg120 + g3pg B3825 (:UNMAPPED-CPDS) LPLIPAL2ATG140 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C14:0)" [c] : 2agpg140 + pg140 --> apg140 + g3pg B3825 (:UNMAPPED-CPDS) LPLIPAL2ATG141 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C14:1)" [c] : 2agpg141 + pg141 --> apg141 + g3pg B3825 (:UNMAPPED-CPDS) LPLIPAL2ATG160 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:0)" [c] : 2agpg160 + pg160 --> apg160 + g3pg B3825 LPLIPAL2ATG161 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:1)" [c] : 2agpg161 + pg161 --> apg161 + g3pg B3825 LPLIPAL2ATG180 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C18:0)" [c] : 2agpg180 + pg180 --> apg180 + g3pg B3825 (:UNMAPPED-CPDS) LPLIPAL2ATG181 "Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C18:1)" [c] : 2agpg181 + pg181 --> apg181 + g3pg B3825 (:UNMAPPED-CPDS) LPLIPAL2E120 "Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C12:0)" [c] : 2agpe120 + h2o --> ddca + g3pe + h B3825 LPLIPAL2E140 "Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:0)" [c] : 2agpe140 + h2o --> g3pe + h + ttdca B3825 LPLIPAL2E141 "Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:1)" [c] : 2agpe141 + h2o --> g3pe + h + ttdcea B3825 (:UNMAPPED-CPDS) LPLIPAL2E160 "Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:0)" [c] : 2agpe160 + h2o --> g3pe + h + hdca B3825 LPLIPAL2E161 "Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:1)" [c] : 2agpe161 + h2o --> g3pe + h + hdcea B3825 LPLIPAL2E180 "Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:0)" [c] : 2agpe180 + h2o --> g3pe + h + ocdca B3825 LPLIPAL2E181 "Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:1)" [c] : 2agpe181 + h2o --> g3pe + h + ocdcea B3825 LPLIPAL2G120 "Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C12:0)" [c] : 2agpg120 + h2o --> ddca + g3pg + h B3825 (:UNMAPPED-CPDS) LPLIPAL2G140 "Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:0)" [c] : 2agpg140 + h2o --> g3pg + h + ttdca B3825 (:UNMAPPED-CPDS) LPLIPAL2G141 "Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:1)" [c] : 2agpg141 + h2o --> g3pg + h + ttdcea B3825 (:UNMAPPED-CPDS) LPLIPAL2G160 "Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:0)" [c] : 2agpg160 + h2o --> g3pg + h + hdca B3825 LPLIPAL2G161 "Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:1)" [c] : 2agpg161 + h2o --> g3pg + h + hdcea B3825 LPLIPAL2G180 "Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:0)" [c] : 2agpg180 + h2o --> g3pg + h + ocdca B3825 (:UNMAPPED-CPDS) LPLIPAL2G181 "Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:1)" [c] : 2agpg181 + h2o --> g3pg + h + ocdcea B3825 (:UNMAPPED-CPDS) LSERDHr L-serine dehydrogenase [c] : nadp + ser-L <==> 2amsa + h + nadph B1539 (RXN0-2201) LYSabcpp L-lysine transport via ABC system (periplasm) atp[c] + h2o[c] + lys-L[p] --> adp[c] + h[c] + lys-L[c] + pi[c] (B2310 AND B2307 AND B2306 AND B2308) (ABC-3-RXN) ((RIGHT REMOVE PROTON)) LYSDC lysine decarboxylase [c] : h + lys-L --> 15dap + co2 (B0186 OR B4131) (LYSDECARBOX-RXN) ((LEFT REMOVE PROTON)) LYSt2pp L-lysine transport in via proton symport (periplasm) h[p] + lys-L[p] --> h[c] + lys-L[c] B2156 (TRANS-RXN-58) LYSt3pp L-lysine transport out via proton antiport (cytoplasm to periplasm) h[p] + lys-L[c] --> h[c] + lys-L[p] B2923 LYStex L-lysine transport via diffusion (extracellular to periplasm) lys-L[e] <==> lys-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) LYSTRS Lysyl-tRNA synthetase [c] : atp + lys-L + trnalys --> amp + lystrna + ppi (B2890 OR B4129) (LYSINE--TRNA-LIGASE-RXN) LYXI Lyxose isomerase [c] : lyx-L --> xylu-L B3903 (LYXISOM-RXN) LYXt2pp L-Lyxose transport via proton symport (periplasm) h[p] + lyx-L[p] --> h[c] + lyx-L[c] B3907 LYXtex L-Lyxose transport via diffusion (extracellular to periplasm) lyx-L[e] <==> lyx-L[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) M1PD mannitol-1-phosphate 5-dehydrogenase [c] : mnl1p + nad <==> f6p + h + nadh B3600 (MANNPDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) MACPD Malonyl-ACP decarboxylase [c] : h + malACP --> acACP + co2 B2323 (MALONYL-ACPDECARBOX-RXN) ((LEFT REMOVE PROTON)) MALDDH malate decarboxylating oxidoreductase (decarboxylating) [c] : mal-D + nad --> co2 + nadh + pyr B1800 (1.1.1.83-RXN) (:METACYC) MALDt2_2pp D-Malate transport via proton symport (2 H) (periplasm) (2) h[p] + mal-D[p] --> (2) h[c] + mal-D[c] B3528 MALDtex D-Malate transport via diffusion (extracellular to periplasm) mal-D[e] <==> mal-D[p] (B1377 OR B0929 OR B2215 OR B0241) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MALS malate synthase [c] : accoa + glx + h2o --> coa + h + mal-L (B4014 OR B2976) (MALSYN-RXN) ((RIGHT REMOVE PROTON)) MALt2_2pp Malate transport via proton symport (2 H) (periplasm) (2) h[p] + mal-L[p] --> (2) h[c] + mal-L[c] B3528 (TRANS-RXN-121A) MALt2_3pp Malate transport via proton symport (3 H) (periplasm) (3) h[p] + mal-L[p] --> (3) h[c] + mal-L[c] (B4138 OR B4123) (TRANS-RXN-121A) MALTabcpp maltose transport via ABC system (periplasm) atp[c] + h2o[c] + malt[p] --> adp[c] + h[c] + malt[c] + pi[c] (B4034 AND B4033 AND B4032 AND B4035) (ABC-16-RXN) ((RIGHT REMOVE PROTON)) MALTATr maltose O-acetyltransferase [c] : accoa + malt <==> acmalt + coa B0459 (MALTACETYLTRAN-RXN) MALtex Malate transport via diffusion (extracellular to periplasm) mal-L[e] <==> mal-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MALTHXabcpp maltohexaose transport via ABC system (periplasm) atp[c] + h2o[c] + malthx[p] --> adp[c] + h[c] + malthx[c] + pi[c] (B4034 AND B4033 AND B4032 AND B4035) MALTHXtexi maltohexaose transport via diffusion (extracellular to periplasm) irreversible malthx[e] --> malthx[p] B4036 MALTPTabcpp maltopentaose transport via ABC system (periplasm) atp[c] + h2o[c] + maltpt[p] --> adp[c] + h[c] + maltpt[c] + pi[c] (B4034 AND B4033 AND B4032 AND B4035) MALTptspp maltose transport via PEP:Pyr PTS (periplasm) malt[p] + pep[c] --> malt6p[c] + pyr[c] (B2417 AND B1621 AND B2415 AND B2416) MALTPTtexi maltopentaoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible maltpt[e] --> maltpt[p] B4036 MALTtexi maltoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible malt[e] --> malt[p] B4036 (RXN0-1741) MALTTRabcpp Maltotriose transport via ABC system (periplasm) atp[c] + h2o[c] + malttr[p] --> adp[c] + h[c] + malttr[c] + pi[c] (B4034 AND B4033 AND B4032 AND B4035) MALTTRtexi Maltotriose transport via diffusion (extracellular to periplasm) irreversible malttr[e] --> malttr[p] B4036 (RXN0-1683) (:EXPANDED-RXN-MATCH) MALTTTRabcpp maltotetraose transport via ABC system (periplasm) atp[c] + h2o[c] + maltttr[p] --> adp[c] + h[c] + maltttr[c] + pi[c] (B4034 AND B4033 AND B4032 AND B4035) MALTTTRtexi maltotetraoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible maltttr[e] --> maltttr[p] B4036 (RXN0-1683) (:EXPANDED-RXN-MATCH) MAN1PT2 mannose-1-phosphate guanylyltransferase (GDP) [c] : gdp + h + man1p --> gdpmann + pi B2049 (MANNPGUANYLTRANGDP-RXN) ((LEFT REMOVE PROTON)) MAN6PI mannose-6-phosphate isomerase [c] : man6p <==> f6p B1613 (MANNPISOM-RXN) MAN6Pt6_2pp Mannose-6-phosphate transport via phosphate antiport (periplasm) man6p[p] + (2) pi[c] --> man6p[c] + (2) pi[p] B3666 MAN6Ptex Mannose 6-phosphate transport via diffusion (extracellular to periplasm) man6p[e] <==> man6p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MANAO Mannonate oxidoreductase [c] : mana + nad <==> fruur + h + nadh B4323 (MANNONOXIDOREDUCT-RXN) ((RIGHT REMOVE PROTON)) MANGLYCptspp 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm) manglyc[p] + pep[c] --> man6pglyc[c] + pyr[c] (B0731 AND B2415 AND B2416) (:UNMAPPED-CPDS) MANGLYCtex 2-O-alpha-mannosyl-D-glycerate transport via diffusion (extracellular to periplasm) manglyc[e] <==> manglyc[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MANPGH 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase [c] : h2o + man6pglyc --> glyc-R + man6p B0732 (:UNMAPPED-CPDS) MANptspp D-mannose transport via PEP:Pyr PTS (periplasm) man[p] + pep[c] --> man6p[c] + pyr[c] (B1817 AND B1818 AND B1819 AND B2415 AND B2416) (TRANS-RXN-165) MANtex D-mannose transport via diffusion (extracellular to periplasm) man[e] <==> man[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) MCITD 2-methylcitrate dehydratase [c] : 2mcit --> 2mcacn + h2o B0334 (2-METHYLCITRATE-DEHYDRATASE-RXN) MCITL2 methylisocitrate lyase [c] : micit <==> pyr + succ B0331 (METHYLISOCITRATE-LYASE-RXN) MCITS 2-methylcitrate synthase [c] : h2o + oaa + ppcoa --> 2mcit + coa + h B0333 (2-METHYLCITRATE-SYNTHASE-RXN) ((RIGHT REMOVE PROTON)) MCOATA Malonyl-CoA-ACP transacylase [c] : ACP + malcoa <==> coa + malACP (B1094 AND B1092) (MALONYL-COA-ACP-TRANSACYL-RXN) MCPST 3-mercaptopyruvate sulfurtransferase [c] : cyan + mercppyr --> h + pyr + tcynt B2521 (MERCAPYSTRANS-RXN) ((RIGHT REMOVE PROTON)) MCTP1App murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm) [p] : murein5p5p --> ala-D + murein5px4p (B0084 OR B0635 OR B0149 OR B3396) (:UNMAPPED-CPDS) MCTP1Bpp murein crosslinking transpeptidase 1B:(A2pm->A2pm) (periplasm) [p] : murein5p5p --> alaala + murein5px3p (B0149 OR B3396) (:UNMAPPED-CPDS) MCTP2App murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm) [p] : murein5p5p5p --> (2) ala-D + murein5px4px4p (B0084 OR B0635 OR B3396 OR B0149) (:UNMAPPED-CPDS) MDDCP1pp "murein D,D-carboxypeptidase (murein5px4p) (periplasm)" [p] : h2o + murein5px4p --> ala-D + murein4px4p (B0632 OR B3182 OR B0839 OR B2010) (:UNMAPPED-CPDS) MDDCP2pp "murein D,D-carboxypeptidase (murein5px4px4p) (periplasm)" [p] : h2o + murein5px4px4p --> ala-D + murein4px4px4p (B0632 OR B3182 OR B0839 OR B2010) (:UNMAPPED-CPDS) MDDCP3pp "murein D,D-carboxypeptidase (murein5p5p) (periplasm)" [p] : h2o + murein5p5p --> ala-D + murein5p4p (B0632 OR B3182 OR B0839 OR B2010) (:UNMAPPED-CPDS) MDDCP4pp "murein D,D-carboxypeptidase (murein5p4p) (periplasm)" [p] : h2o + murein5p4p --> ala-D + murein4p4p (B0632 OR B3182 OR B0839 OR B2010) (:UNMAPPED-CPDS) MDDCP5pp "murein D,D-carboxypeptidase (murein5p3p) (periplasm)" [p] : h2o + murein5p3p --> ala-D + murein4p3p (B0632 OR B3182 OR B0839 OR B2010) (:UNMAPPED-CPDS) MDDEP1pp "murein D,D-endopeptidase (murein4px4p) (periplasm)" [p] : h2o + murein4px4p --> murein4p4p (B3182 OR B2328 OR B2134) (:UNMAPPED-CPDS) MDDEP2pp "murein D,D-endopeptidase (murein3px4p) (periplasm)" [p] : h2o + murein3px4p --> murein4p3p (B3182 OR B2328 OR B2134) (:UNMAPPED-CPDS) MDDEP3pp "murein D,D-endopeptidase (murein5px4p) (periplasm)" [p] : h2o + murein5px4p --> murein5p4p (B3182 OR B2328 OR B2134) (:UNMAPPED-CPDS) MDDEP4pp "murein D,D-endopeptidase (murein4px4px4p) (periplasm)" [p] : h2o + murein4px4px4p --> murein4px4p4p (B3182 OR B2328 OR B2134) (:UNMAPPED-CPDS) MDH malate dehydrogenase [c] : mal-L + nad <==> h + nadh + oaa B3236 (MALATE-DEH-RXN) ((RIGHT REMOVE PROTON)) MDH2 Malate dehydrogenase (ubiquinone 8 as acceptor) [c] : mal-L + q8 --> oaa + q8h2 B2210 MDH3 Malate dehydrogenase (menaquinone 8 as acceptor) [c] : mal-L + mqn8 --> mql8 + oaa B2210 (RXNI-3) (:METACYC) MDRPD 5-Methylthio-5-deoxy-D-ribulose 1-phosphate dehydratase [c] : 5mdru1p --> dkmpp + h2o (R145-RXN) (:METACYC) ME1 malic enzyme (NAD) [c] : mal-L + nad --> co2 + nadh + pyr B1479 (MALIC-NAD-RXN) ME2 malic enzyme (NADP) [c] : mal-L + nadp --> co2 + nadph + pyr B2463 (MALIC-NADP-RXN) MECDPDH2 "2C-methyl-D-erythritol 2,4 cyclodiphosphate dehydratase" [c] : 2mecdp + nadh --> h2mb4p + h2o + nad B2515 MECDPS "2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" [c] : 2p4c2me --> 2mecdp + cmp B2746 (RXN0-302) MELIBt2pp melibiose transport in via symport (periplasm) h[p] + melib[p] --> h[c] + melib[c] B4120 (TRANS-RXN-94) MELIBt3ipp melibiose transport in via antiport (periplasm) h[p] + melib[c] --> h[c] + melib[p] B1528 MELIBtex melibiose transport via diffusion (extracellular to periplasm) melib[e] <==> melib[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) MEPCT 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [c] : 2me4p + ctp + h --> 4c2me + ppi B2747 (2.7.7.60-RXN) ((LEFT REMOVE PROTON)) METabcpp L-methionine transport via ABC system (periplasm) atp[c] + h2o[c] + met-L[p] --> adp[c] + h[c] + met-L[c] + pi[c] (B0198 AND B0199 AND B0197) (RXN0-4522) ((RIGHT REMOVE PROTON)) METAT methionine adenosyltransferase [c] : atp + h2o + met-L --> amet + pi + ppi B2942 (S-ADENMETSYN-RXN) METDabcpp D-methionine transport via ABC system (periplasm) atp[c] + h2o[c] + met-D[p] --> adp[c] + h[c] + met-D[c] + pi[c] (B0198 AND B0199 AND B0197) (TRANS-RXN0-202) ((RIGHT REMOVE PROTON)) METDtex D-methionine transport via diffusion (extracellular to periplasm) met-D[e] <==> met-D[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) METOX1s methionine spontaneous oxidation [c] : h2o2 + met-L --> h2o + metsox-S-L METOX2s methionine spontaneous oxidation 2 [c] : h2o2 + met-L --> h2o + metsox-R-L (:UNMAPPED-CPDS) METS methionine synthase [c] : 5mthf + hcys-L --> h + met-L + thf (B4019 OR B3829) (HOMOCYSMETB12-RXN) ((RIGHT REMOVE PROTON)) METSOX1abcpp L-methionine S-oxide transport via ABC system (periplasm) atp[c] + h2o[c] + metsox-S-L[p] --> adp[c] + h[c] + metsox-S-L[c] + pi[c] METSOX1tex L-methionine S-oxide diffusion (extracellular) metsox-S-L[e] <==> metsox-S-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) METSOX2abcpp L-methionine R-oxide transport via ABC system (periplasm) atp[c] + h2o[c] + metsox-R-L[p] --> adp[c] + h[c] + metsox-R-L[c] + pi[c] (:UNMAPPED-CPDS) METSOX2tex L-methionine R-oxide diffusion (extracellular) metsox-R-L[e] <==> metsox-R-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:UNMAPPED-CPDS) METSOXR1 L-methionine-S-oxide reductase [c] : metsox-S-L + trdrd --> h2o + met-L + trdox ((B4219 AND B2582) OR (B4219 AND B3781)) (METHIONINE-S-OXIDE-REDUCTASE-RXN) (:EXPANDED-RXN-MATCH) METSOXR2 L-methionine-R-sulfoxide reductase [c] : metsox-R-L + trdrd --> h2o + met-L + trdox ((B1778 AND B2582) OR (B1778 AND B3781)) (:UNMAPPED-CPDS) METtex L-methionine transport via diffusion (extracellular to periplasm) met-L[e] <==> met-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) METTRS Methionyl-tRNA synthetase [c] : atp + met-L + trnamet --> amp + mettrna + ppi B2114 (METHIONINE--TRNA-LIGASE-RXN) MG2t3_2pp magnesium (Mg+2) transport in/out via proton antiport (periplasm) (2) h[c] + mg2[p] <==> (2) h[p] + mg2[c] (TRANS-RXN-141) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) MG2tex magnesium (Mg+2) transport via diffusion (extracellular to periplasm) mg2[e] <==> mg2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MG2tpp magnesium (+2) transport in via diffusion mg2[p] --> mg2[c] B3816 (TRANS-RXN-141) MG2uabcpp "Magnesium (Mg+2) ABC transporter (ubtake, periplasm)" atp[c] + h2o[c] + mg2[p] --> adp[c] + h[c] + mg2[c] + pi[c] B4242 (TRANS-RXN-250) ((RIGHT REMOVE PROTON)) MGSA methylglyoxal synthase [c] : dhap --> mthgxl + pi B0963 (METHGLYSYN-RXN) MI1PP myo-inositol 1-phosphatase [c] : h2o + mi1p-D --> inost + pi B2533 (RXN-7252) (:METACYC) MICITD 2-methylisocitrate dehydratase [c] : 2mcacn + h2o --> micit B0118 (4.2.1.99-RXN) MINOHPtexi myo-inositol phosphate transport via diffusion (extracellular to periplasm) minohp[e] --> minohp[p] MLDCP1App "murein L,D-carboxypeptidase (murein5px4p) (periplasm)" [p] : h2o + murein5px4p --> alaala + murein3px4p (:UNMAPPED-CPDS) MLDCP1Bpp "murein L,D-carboxypeptidase (murein4p4p) (periplasm)" [p] : h2o + murein4p4p --> ala-D + murein4p3p (:UNMAPPED-CPDS) MLDCP2App "murein L,D-carboxypeptidase (murein5p5p) (periplasm)" [p] : h2o + murein5p5p --> alaala + murein5p3p (:UNMAPPED-CPDS) MLDCP2Bpp "murein L,D-carboxypeptidase (murein4p3p) (periplasm)" [p] : h2o + murein4p3p --> ala-D + murein3p3p (:UNMAPPED-CPDS) MLDCP3App "murein L,D-carboxypeptidase (murein5px3p) (periplasm)" [p] : h2o + murein5px3p --> alaala + murein3px3p (:UNMAPPED-CPDS) MLDEP1pp "murein L,D-endopeptidase (murein3px3p) (periplasm)" [p] : h2o + murein3px3p --> murein3p3p (:UNMAPPED-CPDS) MLDEP2pp "murein L,D-endopeptidase (murein5px3p) (periplasm)" [p] : h2o + murein5px3p --> murein5p3p (:UNMAPPED-CPDS) MLTG1 Maltodextrin glucosidase (maltotriose) [c] : h2o + malttr --> glc-D + malt B0403 (RXN0-5183) MLTG2 Maltodextrin glucosidase (maltotetraose) [c] : h2o + maltttr --> glc-D + malttr B0403 (MALTET-RXN) (:METACYC) MLTG3 Maltodextrin glucosidase (maltopentaose) [c] : h2o + maltpt --> glc-D + maltttr B0403 MLTG4 Maltodextrin glucosidase (maltohexaose) [c] : h2o + malthx --> glc-D + maltpt B0403 MLTG5 Maltodextrin glucosidase (maltoheptaose) [c] : h2o + malthp --> glc-D + malthx B0403 MLTGY1pp murein lytic transglycosylase (murein4p4p) (periplasm) [p] : murein4p4p --> (2) anhgm4p (B2963 OR B4392 OR B2813 OR B2701 OR B1193) (:UNMAPPED-CPDS) MLTGY2pp murein lytic transglycosylase (murein4p3p) (periplasm) [p] : murein4p3p --> anhgm3p + anhgm4p (B1193 OR B2963 OR B4392 OR B2813 OR B2701) (:UNMAPPED-CPDS) MLTGY3pp murein lytic transglycosylase (murein3p3p) (periplasm) [p] : murein3p3p --> (2) anhgm3p (B1193 OR B2963 OR B4392 OR B2813 OR B2701) (:UNMAPPED-CPDS) MLTGY4pp murein lytic transglycosylase (murein4px4p4p) (periplasm) [p] : murein4px4p4p --> anhgm4p + murein4px4p (B2701 OR B1193 OR B2963 OR B4392 OR B2813) (:UNMAPPED-CPDS) MLTP1 Maltodextrin phosphorylase (maltopentaose) [c] : maltpt + pi <==> g1p + maltttr B3417 MLTP2 Maltodextrin phosphorylase (maltohexaose) [c] : malthx + pi <==> g1p + maltpt B3417 MLTP3 Maltodextrin phosphorylase (maltoheptaose) [c] : malthp + pi <==> g1p + malthx B3417 MMCD Methylmalonyl-CoA decarboxylase [c] : h + mmcoa-S --> co2 + ppcoa B2919 (METHYLMALONYL-COA-DECARBOXYLASE-RXN) (:METACYC (LEFT REMOVE PROTON)) MME methylmalonyl-CoA epimerase [c] : mmcoa-R <==> mmcoa-S (METHYLMALONYL-COA-EPIM-RXN) MMETt2pp S-methylmethionine permease (periplasm) h[p] + mmet[p] --> h[c] + mmet[c] B0260 MMETtex S-methyl-L-methionine transport via diffusion (extracellular to periplasm) mmet[e] <==> mmet[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MMM2 Methylmalonyl-CoA mutase [c] : succoa --> mmcoa-R B2917 (METHYLMALONYL-COA-MUT-RXN) MN2t3pp manganese (Mn+2) transport out via proton antiport (periplasm) h[p] + mn2[c] --> h[c] + mn2[p] (B3915 OR B0752) MN2tpp manganese transport in via permease (no H+) mn2[p] --> mn2[c] B3040 MN6PP mannose 6-phosphate phosphatase [c] : h2o + man6p --> man + pi B0822 (SUGAR-PHOSPHATASE-RXN) (:EXPANDED-RXN-MATCH) MNLptspp mannitol transport via PEP:Pyr PTS (periplasm) mnl[p] + pep[c] --> mnl1p[c] + pyr[c] (B3599 AND B2415 AND B2416) (TRANS-RXN-156) MNLtex mannitol transport via diffusion (extracellular to periplasm) mnl[e] <==> mnl[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MNNH D-mannonate hydrolyase [c] : mana --> 2ddglcn + h2o B4322 (MANNONDEHYDRAT-RXN) MNt2pp manganese (Mn+2) transport in via proton symport (periplasm) h[p] + mn2[p] --> h[c] + mn2[c] B2392 (TRANS-RXN-241) MNtex Manganese (Mn+2) transport via diffusion (extracellular to periplasm) mn2[e] <==> mn2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MOAT 3-deoxy-D-manno-octulosonic acid transferase [c] : ckdo + lipidA --> cmp + h + kdolipid4 B3633 (KDOTRANS-RXN) ((RIGHT REMOVE PROTON)) MOAT2 3-deoxy-D-manno-octulosonic acid transferase [c] : ckdo + kdolipid4 --> cmp + h + kdo2lipid4 B3633 (KDOTRANS2-RXN) ((RIGHT REMOVE PROTON)) MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) [c] : ckdo + phphhlipa --> cmp + h + kphphhlipa B3624 (:UNMAPPED-CPDS) MOBDabcpp molybdate transport via ABC system (periplasm) atp[c] + h2o[c] + mobd[p] --> adp[c] + h[c] + mobd[c] + pi[c] (B0763 AND B0764 AND B0765 AND B0760) (ABC-19-RXN) ((RIGHT REMOVE PROTON)) MOBDtex molybdate transport via diffusion (extracellular to periplasm) mobd[e] <==> mobd[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MOHMT 3-methyl-2-oxobutanoate hydroxymethyltransferase [c] : 3mob + h2o + mlthf --> 2dhp + thf B0134 (3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN) MPTG murein polymerizing transglycosylase (2) uaagmda[c] --> (2) h[c] + murein5p5p[p] + (2) udcpdp[c] (B0149 OR B3396 OR B2519) (:UNMAPPED-CPDS) MPTG2 murein polymerizing transglycosylase 2 (three linked units) murein5p5p[p] + uaagmda[c] --> h[c] + murein5p5p5p[p] + udcpdp[c] (B0149 OR B2519 OR B3396) (:UNMAPPED-CPDS) MSO3abcpp methanesulfonate transport via ABC system (periplasm) atp[c] + h2o[c] + mso3[p] --> adp[c] + h[c] + mso3[c] + pi[c] (B0936 AND B0933 AND B0934) MSO3tex methanesulfonate transport via diffusion (extracellular to periplasm) mso3[e] <==> mso3[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) MTAN methylthioadenosine nucleosidase [c] : 5mta + h2o --> 5mtr + ade B0159 (METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN) (:METACYC) MTHFC methenyltetrahydrofolate cyclohydrolase [c] : h2o + methf <==> 10fthf + h B0529 (METHENYLTHFCYCLOHYDRO-RXN) ((RIGHT REMOVE PROTON)) MTHFD methylenetetrahydrofolate dehydrogenase (NADP) [c] : mlthf + nadp <==> methf + nadph B0529 (METHYLENETHFDEHYDROG-NADP-RXN) MTHFR2 "5,10-methylenetetrahydrofolate reductase (NADH)" [c] : (2) h + mlthf + nadh --> 5mthf + nad B3941 (1.5.1.20-RXN) (:EXPANDED-RXN-MATCH) MTRI 5-methylthioribose-1-phosphate isomerase [c] : 5mdr1p <==> 5mdru1p (5.3.1.23-RXN) (:METACYC) MTRK 5-methylthioribose kinase [c] : 5mtr + atp --> 5mdr1p + adp + h (5-METHYLTHIORIBOSE-KINASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) MTRPOX N-methyltryptophan oxidase [c] : Nmtrp + h2o + o2 --> fald + h2o2 + trp-L B1059 (RXN0-301) N2Otex nitrious oxide transport via diffusion (extracellular to periplasm) n2o[e] <==> n2o[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) N2Otpp nitrious oxide transport (diffusion) n2o[p] <==> n2o[c] (:DIFFUSION) (:INNER-MEMBRANE-DIFFUSION) NACODA N-acetylornithine deacetylase [c] : acg5sa + h2o --> ac + glu5sa B3957 NACtex Nicotinic acid transport via diffusion (extracellular to periplasm) nac[e] <==> nac[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) NACtpp Nicotinic acid uptake (periplasm) nac[p] --> nac[c] NADDP NAD diphosphatase [c] : h2o + nad --> amp + (2) h + nmn (B2411 OR B3996) (NADPYROPHOSPHAT-RXN) ((RIGHT REMOVE PROTON)) NADH10 NADH dehydrogenase (menaquinone-8 & 0 protons) [c] : h + mqn8 + nadh --> mql8 + nad B1109 (NQOR-RXN) (:EXPANDED-RXN-MATCH) NADH16pp NADH dehydrogenase (ubiquinone-8 & 3 protons) (periplasm) (4) h[c] + nadh[c] + q8[c] --> (3) h[p] + nad[c] + q8h2[c] (B2276 AND B2277 AND B2278 AND B2279 AND B2280 AND B2281 AND B2282 AND B2283 AND B2284 AND B2285 AND B2286 AND B2287 AND B2288) (NADH-DEHYDROG-A-RXN) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) NADH17pp NADH dehydrogenase (menaquinone-8 & 3 protons) (periplasm) (4) h[c] + mqn8[c] + nadh[c] --> (3) h[p] + mql8[c] + nad[c] (B2276 AND B2277 AND B2278 AND B2279 AND B2280 AND B2281 AND B2282 AND B2283 AND B2284 AND B2285 AND B2286 AND B2287 AND B2288) (NQOR-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) NADH18pp NADH dehydrogenase (demethylmenaquinone-8 & 3 protons) (periplasm) 2dmmq8[c] + (4) h[c] + nadh[c] --> 2dmmql8[c] + (3) h[p] + nad[c] (B2276 AND B2277 AND B2278 AND B2279 AND B2280 AND B2281 AND B2282 AND B2283 AND B2284 AND B2285 AND B2286 AND B2287 AND B2288) NADH5 NADH dehydrogenase (ubiquinone-8 ) [c] : h + nadh + q8 --> nad + q8h2 B1109 (NADH-DEHYDROG-A-RXN) ((LEFT REMOVE PROTON)) NADH9 NADH dehydrogenase (demethylmenaquinone-8 & 0 protons) [c] : 2dmmq8 + h + nadh --> 2dmmql8 + nad B1109 NADK NAD kinase [c] : atp + nad --> adp + h + nadp B2615 (NAD-KIN-RXN) ((RIGHT REMOVE PROTON)) NADN NAD nucleosidase [c] : h2o + nad --> adprib + h + ncam (NADNUCLEOSID-RXN) ((RIGHT REMOVE PROTON)) NADPHQR2 NADPH Quinone Reductase (Ubiquinone-8) [c] : h + nadph + q8 --> nadp + q8h2 B3028 NADPHQR3 NADPH Quinone Reductase (Menaquinone-8) [c] : h + mqn8 + nadph --> mql8 + nadp B3028 (NQOR-RXN) (:EXPANDED-RXN-MATCH) NADPHQR4 NADPH Quinone Reductase (2-Demethylmenaquinone-8) [c] : 2dmmq8 + h + nadph --> 2dmmql8 + nadp B3028 NADPPPS NADP phosphatase [c] : h2o + nadp --> nad + pi (NADPPHOSPHAT-RXN) NADS1 NAD synthase (nh3) [c] : atp + dnad + nh4 --> amp + h + nad + ppi B1740 (NAD-SYNTH-NH3-RXN) ((LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT REMOVE PROTON)) NADTRHD NAD transhydrogenase [c] : nad + nadph --> nadh + nadp (B3962 OR (B1602 AND B1603)) (1.6.1.2-RXN PYRNUTRANSHYDROGEN-RXN) NAMNPP nicotinic acid mononucleotide pyrophosphorylase [c] : atp + h2o + nac + prpp --> adp + nicrnt + pi + ppi B0931 NAt3_1p5pp sodium proton antiporter (H:NA is 1.5) (periplasm) (3) h[p] + (2) na1[c] --> (3) h[c] + (2) na1[p] B1186 (TRANS-RXN-129 TRANS-RXN-101 TRANS-RXN-130) NAt3_2pp sodium proton antiporter (H:NA is 2) (periplasm) (2) h[p] + na1[c] --> (2) h[c] + na1[p] B0019 (TRANS-RXN-129 TRANS-RXN-101 TRANS-RXN-130) NAt3pp sodium transport out via proton antiport (cytoplasm to periplasm) h[p] + na1[c] --> h[c] + na1[p] (B0842 OR B1216) (TRANS-RXN-129 TRANS-RXN-101 TRANS-RXN-130) NAtex sodium transport via diffusion (extracellular to periplasm) na1[e] <==> na1[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) NDPK1 nucleoside-diphosphate kinase (ATP:GDP) [c] : atp + gdp <==> adp + gtp (B2518 OR B0474) (GDPKIN-RXN) NDPK2 nucleoside-diphosphate kinase (ATP:UDP) [c] : atp + udp <==> adp + utp (B2518 OR B0474) (UDPKIN-RXN) NDPK3 nucleoside-diphosphate kinase (ATP:CDP) [c] : atp + cdp <==> adp + ctp (B2518 OR B0474) (CDPKIN-RXN) NDPK4 nucleoside-diphosphate kinase (ATP:dTDP) [c] : atp + dtdp <==> adp + dttp (B2518 OR B0474) (DTDPKIN-RXN) NDPK5 nucleoside-diphosphate kinase (ATP:dGDP) [c] : atp + dgdp <==> adp + dgtp (B2518 OR B0474) (DGDPKIN-RXN) NDPK6 nucleoside-diphosphate kinase (ATP:dUDP) [c] : atp + dudp <==> adp + dutp (B2518 OR B0474) (DUDPKIN-RXN) NDPK7 nucleoside-diphosphate kinase (ATP:dCDP) [c] : atp + dcdp <==> adp + dctp (B2518 OR B0474) (DCDPKIN-RXN) NDPK8 nucleoside-diphosphate kinase (ATP:dADP) [c] : atp + dadp <==> adp + datp (B2518 OR B0474) (DADPKIN-RXN) NH4tex ammonia transport via diffusion (extracellular to periplasm) nh4[e] <==> nh4[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) NH4tpp ammonia reversible transport (periplasm) nh4[p] <==> nh4[c] B0451 (TRANS-RXN-149) ((LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) NHFRBO NADH:flavorubredoxin oxidoreductase [c] : h + nadh + (2) no --> h2o + n2o + nad (B2710 AND B2711) NI2abcpp Nickle (Ni+2) ABC transporter (periplasm) atp[c] + h2o[c] + ni2[c] --> adp[c] + h[c] + ni2[p] + pi[c] B3469 NI2t3pp nickle (Ni+2) transport out via proton antiport (periplasm) h[p] + ni2[c] --> h[c] + ni2[p] (B3915 OR B0752) (TRANS-RXN-141B) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) NI2tex nickel transport via diffusion (extracellular to periplasm) ni2[e] <==> ni2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) NI2tpp nickel (+2) transport in via permease (no H+) ni2[p] --> ni2[c] B3816 (TRANS-RXN-141B) NI2uabcpp "nickel transport via ABC system (uptake, periplasm)" atp[c] + h2o[c] + ni2[p] --> adp[c] + h[c] + ni2[c] + pi[c] ((B3476 AND B3477 AND B3478 AND B3479 AND B3480) OR B4242) (ABC-20-RXN) ((RIGHT REMOVE PROTON)) NMNAT nicotinamide-nucleotide adenylyltransferase [c] : atp + h + nmn --> nad + ppi (B0639 OR B4390) (2.7.7.1-RXN) ((LEFT REMOVE PROTON)) NMNDA nicotinamide-nucleotide amidase [c] : h2o + nmn --> nh4 + nicrnt (NMNAMIDOHYDRO-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) NMNN NMN nucleosidase [c] : h2o + nmn --> h + ncam + r5p (NMNNUCLEOSID-RXN) ((RIGHT REMOVE PROTON)) NMNPtpp NMN permease (periplasm) nmn[p] --> nmn[c] B0751 (TRANS-RXN-9) NMNt7pp NMN transport via NMN glycohydrolase (periplasm) h2o[c] + nmn[p] --> h[c] + ncam[c] + r5p[c] NMNtex NMN transport via diffusion (extracellular to periplasm) nmn[e] <==> nmn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) NNAM nicotinamidase [c] : h2o + ncam --> nac + nh4 B1768 (NICOTINAMID-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) NNATr nicotinate-nucleotide adenylyltransferase [c] : atp + h + nicrnt <==> dnad + ppi B0639 (NICONUCADENYLYLTRAN-RXN) ((LEFT REMOVE PROTON)) NNDMBRT Nicotinate-nucleotide dimethylbenzimidazole phosphoribosyltransferase [c] : dmbzid + nicrnt --> 5prdmbz + h + nac B1991 (DMBPPRIBOSYLTRANS-RXN) ((RIGHT REMOVE PROTON)) NNDPR nicotinate-nucleotide diphosphorylase (carboxylating) [c] : (2) h + prpp + quln --> co2 + nicrnt + ppi B0109 (QUINOPRIBOTRANS-RXN) ((LEFT REMOVE PROTON)) NO2t2rpp "nitrite transport in via proton symport, reversible (periplasm)" h[p] + no2[p] <==> h[c] + no2[c] (B3367 OR B1223) (TRANS-RXN-137) NO2tex nitrite transport via diffusion (extracellular to periplasm) no2[e] <==> no2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) NO3R1bpp Nitrate reductase (Ubiquinol-8) no3[p] + q8h2[c] --> h2o[p] + no2[p] + q8[c] ((B2203 AND B2206) AND B2202 AND B2205 AND B2204) NO3R1pp Nitrate reductase (Ubiquinol-8) (periplasm) (2) h[c] + no3[c] + q8h2[c] --> (2) h[p] + h2o[c] + no2[c] + q8[c] ((B1465 AND B1466 AND B1467 AND B1468) OR (B1224 AND B1225 AND B1226 AND B1227)) NO3R2bpp Nitrate reductase (Menaquinol-8) (periplasm) mql8[c] + no3[p] --> h2o[p] + mqn8[c] + no2[p] ((B2203 AND B2206) AND B2202) NO3R2pp Nitrate reductase (Menaquinol-8) (periplasm) (2) h[c] + mql8[c] + no3[c] --> (2) h[p] + h2o[c] + mqn8[c] + no2[c] ((B1465 AND B1466 AND B1467 AND B1468) OR (B1224 AND B1225 AND B1226 AND B1227)) (RXN0-3501) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) NO3t7pp nitrate transport in via nitrite antiport (periplasm) no2[c] + no3[p] --> no2[p] + no3[c] (B1223 OR B1469) NO3tex nitrate transport via diffusion (extracellular to periplasm) no3[e] <==> no3[p] (B0241 OR B0929 OR B2215 OR B1377) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) NODOx nitric oxide dioxygenase [c] : nadh + (2) no + (2) o2 --> h + nad + (2) no3 B2552 (R621-RXN) (:EXPANDED-RXN-MATCH) NODOy nitric oxide dioxygenase [c] : nadph + (2) no + (2) o2 --> h + nadp + (2) no3 B2552 (R621-RXN) (:EXPANDED-RXN-MATCH) NOtex nitric oxide transport via diffusion (extracellular to periplasm) no[e] <==> no[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) NOtpp NO transport (diffusion) no[p] <==> no[c] (:DIFFUSION) (:INNER-MEMBRANE-DIFFUSION) NPHS naphthoate synthase [c] : sbzcoa --> coa + dhna B2262 (NAPHTHOATE-SYN-RXN) NTD1 5'-nucleotidase (dUMP) [c] : dump + h2o --> duri + pi (B2291 OR B2744 OR B4374) (NUCLEOTIDASE-RXN) (:METACYC :EXPANDED-RXN-MATCH) NTD10 5'-nucleotidase (XMP) [c] : h2o + xmp --> pi + xtsn B2744 (XMPXAN-RXN) (:METACYC) NTD10pp 5'-nucleotidase (XMP) [p] : h2o + xmp --> pi + xtsn (B0480 OR B4055) NTD11 5'-nucleotidase (IMP) [c] : h2o + imp --> ins + pi B2744 (RXN-7607) NTD11pp 5'-nucleotidase (IMP) [p] : h2o + imp --> ins + pi (B0480 OR B4055) NTD12 5'-nucleotidase (dIMP) [c] : dimp + h2o --> din + pi (B2291 OR B2744) NTD12pp 5'-nucleotidase (dIMP) (periplasm) [p] : dimp + h2o --> din + pi (B0480 OR B4055) NTD1pp 5'-nucleotidase (dUMP) [p] : dump + h2o --> duri + pi (B0480 OR B4055) NTD2 5'-nucleotidase (UMP) [c] : h2o + ump --> pi + uri (B2744 OR B4374) (|5'-NUCLEOTID-RXN|) (:EXPANDED-RXN-MATCH) NTD2pp 5'-nucleotidase (UMP) [p] : h2o + ump --> pi + uri (B0480 OR B4055) NTD3 5'-nucleotidase (dCMP) [c] : dcmp + h2o --> dcyt + pi (B2291 OR B2744) (NUCLEOTIDASE-RXN) (:METACYC :EXPANDED-RXN-MATCH) NTD3pp 5'-nucleotidase (dCMP) [p] : dcmp + h2o --> dcyt + pi (B0480 OR B4055) NTD4 5'-nucleotidase (CMP) [c] : cmp + h2o --> cytd + pi B2744 (|5'-NUCLEOTID-RXN|) (:EXPANDED-RXN-MATCH) NTD4pp 5'-nucleotidase (CMP) [p] : cmp + h2o --> cytd + pi (B0480 OR B4055) NTD5 5'-nucleotidase (dTMP) [c] : dtmp + h2o --> pi + thymd (B2291 OR B2744 OR B4374) (|THYMIDYLATE-5'-PHOSPHATASE-RXN|) (:METACYC) NTD5pp 5'-nucleotidase (dTMP) [p] : dtmp + h2o --> pi + thymd (B0480 OR B4055) NTD6 5'-nucleotidase (dAMP) [c] : damp + h2o --> dad-2 + pi (B2291 OR B2744) (NUCLEOTIDASE-RXN) (:METACYC :EXPANDED-RXN-MATCH) NTD6pp 5'-nucleotidase (dAMP) [p] : damp + h2o --> dad-2 + pi (B0480 OR B4055) NTD7 5'-nucleotidase (AMP) [c] : amp + h2o --> adn + pi B2744 (|5'-NUCLEOTID-RXN|) (:EXPANDED-RXN-MATCH) NTD7pp 5'-nucleotidase (AMP) [p] : amp + h2o --> adn + pi (B0480 OR B4055) NTD8 5'-nucleotidase (dGMP) [c] : dgmp + h2o --> dgsn + pi (B2291 OR B2744) (NUCLEOTIDASE-RXN) (:METACYC :EXPANDED-RXN-MATCH) NTD8pp 5'-nucleotidase (dGMP) [p] : dgmp + h2o --> dgsn + pi (B0480 OR B4055) NTD9 5'-nucleotidase (GMP) [c] : gmp + h2o --> gsn + pi B2744 (RXN-7609) NTD9pp 5'-nucleotidase (GMP) [p] : gmp + h2o --> gsn + pi (B0480 OR B4055) NTP1 nucleoside-triphosphatase (ATP) [c] : atp + h2o --> adp + h + pi (B0650 OR B4161) (RXN0-1061 3.6.3.1-RXN 3.6.3.15-RXN 3.6.3.46-RXN 3.6.3.49-RXN 3.6.3.50-RXN 3.6.3.51-RXN 3.6.3.52-RXN 3.6.4.1-RXN 3.6.4.2-RXN 3.6.4.3-RXN 3.6.4.4-RXN 3.6.4.5-RXN 3.6.4.6-RXN 3.6.4.7-RXN 3.6.4.8-RXN 3.6.4.9-RXN 3.6.4.11-RXN ADENOSINETRIPHOSPHATASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) NTP10 nucleoside-triphosphatase (ITP) [c] : h2o + itp --> h + idp + pi (B4161 OR B4394) (RXN0-5073) ((RIGHT REMOVE PROTON)) NTP11 nucleoside-triphosphatase (dITP) [c] : ditp + h2o --> didp + h + pi B4394 NTP12 nucleoside-triphosphatase (XTP) [c] : h2o + xtp --> h + pi + xdp B4394 (RXN0-5074) ((RIGHT REMOVE PROTON)) NTP3 nucleoside-triphosphatase (GTP) [c] : gtp + h2o --> gdp + h + pi B4161 (RXN0-1021) ((RIGHT REMOVE PROTON)) NTP3pp nucleoside-triphosphatase (GTP) (periplasm) [p] : gtp + h2o --> gdp + h + pi B0980 NTP5 nucleoside-triphosphatase (CTP) [c] : ctp + h2o --> cdp + h + pi B4161 NTPP1 Nucleoside triphosphate pyrophosphorylase (dgtp) [c] : dgtp + h2o --> dgmp + h + ppi (B2781 OR B0099) (RXN0-385) ((RIGHT REMOVE PROTON)) NTPP10 Nucleoside triphosphate pyrophosphorylase (ditp) [c] : ditp + h2o --> dimp + h + ppi B2954 (RXN0-1602) ((RIGHT REMOVE PROTON)) NTPP11 Nucleoside triphosphate pyrophosphorylase (xtp) [c] : h2o + xtp --> h + ppi + xmp B2954 (RXN0-1603) ((RIGHT REMOVE PROTON)) NTPP2 Nucleoside triphosphate pyrophosphorylase (gtp) [c] : gtp + h2o --> gmp + h + ppi (B0099 OR B2781) NTPP3 Nucleoside triphosphate pyrophosphorylase (dctp) [c] : dctp + h2o --> dcmp + h + ppi (B2781 OR B1759 OR B2251) (DCTP-PYROPHOSPHATASE-RXN) ((RIGHT REMOVE PROTON)) NTPP4 Nucleoside triphosphate pyrophosphorylase (ctp) [c] : ctp + h2o --> cmp + h + ppi (B2781 OR B1759) (RXN0-383) ((RIGHT REMOVE PROTON)) NTPP5 Nucleoside triphosphate pyrophosphorylase (datp) [c] : datp + h2o --> damp + h + ppi (B2781 OR B1865) (RXN0-384) ((RIGHT REMOVE PROTON)) NTPP6 Nucleoside triphosphate pyrophosphorylase (atp) [c] : atp + h2o --> amp + h + ppi B2781 (ATP-PYROPHOSPHATASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) NTPP7 Nucleoside triphosphate pyrophosphorylase (dttp) [c] : dttp + h2o --> dtmp + h + ppi (B2781 OR B2251) (RXN0-5107) ((RIGHT REMOVE PROTON)) NTPP8 Nucleoside triphosphate pyrophosphorylase (utp) [c] : h2o + utp --> h + ppi + ump B2781 NTPP9 Nucleoside triphosphate pyrophosphorylase (itp) [c] : h2o + itp --> h + imp + ppi B2954 NTPTP1 Nucleoside triphosphate tripolyhydrolase [c] : dgtp + h2o --> dgsn + pppi B0160 (DGTPTRIPHYDRO-RXN) NTPTP2 Nucleoside triphosphate tripolyhydrolase [c] : gtp + h2o --> gsn + pppi B0160 NTRIR2x nitrite Reductase (NADH) [c] : (5) h + (3) nadh + no2 --> (2) h2o + (3) nad + nh4 (B3365 AND B3366) NTRIR3pp "nitrite Reductase (Ubiquinole-8, periplasm)" (2) h[p] + no2[p] + (3) q8h2[c] --> (2) h2o[p] + nh4[p] + (3) q8[c] (B4070 AND B4071 AND B4072 AND B4073) NTRIR4pp "nitrite Reductase (Menaquinole-8, periplasm)" (2) h[p] + (3) mql8[c] + no2[p] --> (2) h2o[p] + (3) mqn8[c] + nh4[p] (B4070 AND B4071 AND B4072 AND B4073) O16A4COLIPAtex O16 antigen (x4) core oligosaccharide lipid A transport (periplasm to extracellular) o16a4colipa[p] --> o16a4colipa[e] (:UNMAPPED-CPDS) O16A4Lpp O16 anitgen (x4) ligase (periplasm) [p] : colipa + o16a4und --> h + o16a4colipa + udcpdp B3622 (:UNMAPPED-CPDS) O16AP1pp O16 antigen polymerase (periplasm) [p] : (2) o16aund --> h + o16a2und + udcpdp (B2035 AND B2027) (:UNMAPPED-CPDS) O16AP2pp O16 antigen polymerase (periplasm) [p] : o16a2und + o16aund --> h + o16a3und + udcpdp (B2035 AND B2027) (:UNMAPPED-CPDS) O16AP3pp O16 antigen polymerase (periplasm) [p] : o16a3und + o16aund --> h + o16a4und + udcpdp (B2035 AND B2027) (:UNMAPPED-CPDS) O16AT rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) [c] : accoa + ragund --> aragund + coa B2033 (:UNMAPPED-CPDS) O16AUNDtpp "O16 antigen (flippase, cytoplasm to periplasm)" o16aund[c] --> o16aund[p] B2037 (:UNMAPPED-CPDS) O16GALFT galactofuranosyltransferase (LPS O16 antigen biosynthesis) [c] : garagund + udpgalfur --> gfgaragund + h + udp B2034 (:UNMAPPED-CPDS) O16GLCT1 glucosyltransferase I (LPS O16 antigen biosynthesis) [c] : aragund + udpg --> garagund + h + udp B2032 (:UNMAPPED-CPDS) O16GLCT2 glucosyltransferase II (LPS O16 antigen biosynthesis) [c] : gfgaragund + udpg --> h + o16aund + udp (:UNMAPPED-CPDS) O2Stex superoxide anion transport via diffusion (extracellular to periplasm) o2s[e] <==> o2s[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) O2tex oxygen transport via diffusion (extracellular to periplasm) o2[e] <==> o2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) O2tpp o2 transport via diffusion (periplasm) o2[p] <==> o2[c] (:DIFFUSION) (:INNER-MEMBRANE-DIFFUSION) OAADC oxaloacetate decarboxylase [c] : h + oaa --> co2 + pyr B1850 (OXALODECARB-RXN) ((LEFT REMOVE PROTON)) OBTFL 2-Oxobutanoate formate lyase [c] : 2obut + coa --> for + ppcoa (((B0902 AND B0903) AND B2579) OR (B0902 AND B0903) OR (B0902 AND B3114)) (KETOBUTFORMLY-RXN) OCBT ornithine carbamoyltransferase [c] : cbp + orn <==> citr-L + h + pi (B4254 OR B0273) (ORNCARBAMTRANSFER-RXN) ((RIGHT REMOVE PROTON)) OCDCAtexi Octadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) ocdca[e] --> ocdca[p] B2344 (RXN0-1802) (:EXPANDED-RXN-MATCH) OCDCEAtexi Octadecenoate (n-C18:1) transport via facilitated irreversible diffusion (extracellular to periplasm) ocdcea[e] --> ocdcea[p] B2344 (RXN0-1802) (:EXPANDED-RXN-MATCH) OCTAtex Octanoate transport via diffusion (extracellular to periplasm) octa[e] <==> octa[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) OCTDPS Octaprenyl pyrophosphate synthase [c] : frdp + (5) ipdp --> octdp + (5) ppi B3187 (OPPSYN-RXN) (:EXPANDED-RXN-MATCH) ODECOAI Octadecenoyl-coa cis-trans isomerization [c] : odecoa --> od2coa B3846 OHPBAT O-Phospho-4-hydroxy-L-threonine:2-oxoglutarate aminotransferase [c] : glu-L + ohpb <==> akg + phthr B0907 (PSERTRANSAMPYR-RXN) OHPHM 2-octaprenyl-6-hydroxyphenol methylase [c] : 2ohph + amet --> 2omph + ahcys + h B2232 (2-OCTAPRENYL-6-OHPHENOL-METHY-RXN) ((RIGHT REMOVE PROTON)) OMBZLM 2-Octaprenyl-6-methoxy-benzoquinol methylase [c] : 2ombzl + amet --> 2ommbl + ahcys + h B3833 (2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN) ((RIGHT REMOVE PROTON)) OMCDC 2-Oxo-4-methyl-3-carboxypentanoate decarboxylation [c] : 3c4mop + h --> 4mop + co2 B0073 (RXN-7800) ((LEFT REMOVE PROTON)) OMMBLHX "2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase" [c] : 2ommbl + (0.5) o2 --> 2omhmbl B0662 OMMBLHX3 "2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (anaerobic)" [c] : 2ommbl + (2) atp + (3) h2o + nad --> 2omhmbl + (2) adp + (3) h + nadh + (2) pi OMPDC orotidine-5'-phosphate decarboxylase [c] : h + orot5p --> co2 + ump B1281 (OROTPDECARB-RXN) ((LEFT REMOVE PROTON)) OMPHHX 2-octaprenyl-6-methoxyphenol hydroxylase [c] : 2omph + (0.5) o2 --> 2ombzl B2907 OMPHHX3 2-octaprenyl-6-methoxyphenol hydroxylase (anaerobic) [c] : 2omph + (2) atp + (3) h2o + nad --> 2ombzl + (2) adp + (3) h + nadh + (2) pi OP4ENH 2-oxopent-4-enoate hydratase [c] : h2o + op4en --> 4h2opntn B0350 (2-OXOPENT-4-ENOATE-HYDRATASE-RXN) OPHBDC Octaprenyl-hydroxybenzoate decarboxylase [c] : 3ophb + h --> 2oph + co2 (B3843 OR B2311) (3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN) ((LEFT REMOVE PROTON)) OPHHX 2-Octaprenylphenol hydroxylase [c] : 2oph + (0.5) o2 --> 2ohph B3835 (2-OCTAPRENYLPHENOL-HYDROX-RXN) OPHHX3 2-Octaprenylphenol hydroxylase (anaerobic) [c] : 2oph + (2) atp + (3) h2o + nad --> 2ohph + (2) adp + (3) h + nadh + (2) pi ORNabcpp ornithine transport via ABC system (periplasm) atp[c] + h2o[c] + orn[p] --> adp[c] + h[c] + orn[c] + pi[c] (B2310 AND B2307 AND B2306 AND B2308) (ABC-37-RXN) ((RIGHT REMOVE PROTON)) ORNDC Ornithine Decarboxylase [c] : h + orn --> co2 + ptrc (B2965 OR B0693) (ORNDECARBOX-RXN) ((LEFT REMOVE PROTON)) ORNtex ornithine transport via diffusion (extracellular to periplasm) orn[e] <==> orn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) OROTt2_2pp Orotate transport via proton symport (2 H) (periplasm) (2) h[p] + orot[p] --> (2) h[c] + orot[c] B3528 (TRANS-RXN-121C) OROTtex Orotate transport via diffusion (extracellular to periplasm) orot[e] <==> orot[p] (B1377 OR B0929 OR B0241 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ORPT orotate phosphoribosyltransferase [c] : orot5p + ppi <==> orot + prpp B3642 (OROPRIBTRANS-RXN) OXAMTC oxamate transcarbamoylase [c] : oxur + pi --> cbp + oxam (OXAMATE-CARBAMOYLTRANSFERASE-RXN) (:METACYC) OXGDC2 2-oxoglutarate decarboxylase [c] : akg + h + thmpp --> co2 + ssaltpp B2264 (2-OXOGLUT-DECARBOX-RXN) ((LEFT REMOVE PROTON)) P5CD 1-pyrroline-5-carboxylate dehydrogenase [c] : 1pyr5c + (2) h2o + nad --> glu-L + h + nadh B1014 (PYRROLINECARBDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) P5CR pyrroline-5-carboxylate reductase [c] : 1pyr5c + (2) h + nadph --> nadp + pro-L B0386 (PYRROLINECARBREDUCT-RXN) (:EXPANDED-RXN-MATCH) PA120abcpp "phosphatidate transport via ABC system (n-C12:0, periplasm)" atp[c] + h2o[c] + pa120[c] --> adp[c] + h[c] + pa120[p] + pi[c] B0914 PA140abcpp "phosphatidate transport via ABC system (n-C14:0, periplasm)" atp[c] + h2o[c] + pa140[c] --> adp[c] + h[c] + pa140[p] + pi[c] B0914 PA141abcpp "phosphatidate transport via ABC system (n-C14:1, periplasm)" atp[c] + h2o[c] + pa141[c] --> adp[c] + h[c] + pa141[p] + pi[c] B0914 PA160abcpp "phosphatidate transport via ABC system (n-C16:0, periplasm)" atp[c] + h2o[c] + pa160[c] --> adp[c] + h[c] + pa160[p] + pi[c] B0914 PA161abcpp "phosphatidate transport via ABC system (n-C16:1, periplasm)" atp[c] + h2o[c] + pa161[c] --> adp[c] + h[c] + pa161[p] + pi[c] B0914 PA180abcpp "phosphatidate transport via ABC system (n-C18:0, periplasm)" atp[c] + h2o[c] + pa180[c] --> adp[c] + h[c] + pa180[p] + pi[c] B0914 PA181abcpp "phosphatidate transport via ABC system (n-C18:1, periplasm)" atp[c] + h2o[c] + pa181[c] --> adp[c] + h[c] + pa181[p] + pi[c] B0914 PACALDt2rpp phenylacetaldehyde reversible transport via proton symport (periplasm) h[p] + pacald[p] <==> h[c] + pacald[c] PACALDtex phenethylacetaldehyde transport via diffusion (extracellular to periplasm) pacald[e] <==> pacald[p] (B2215 OR B0241 OR B0929 OR B1377) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PACCOAL phenylacetate-CoA ligase [c] : atp + coa + pac --> amp + phaccoa + ppi B1398 (PHENYLACETATE--COA-LIGASE-RXN) PANTS pantothenate synthase [c] : ala-B + atp + pant-R --> amp + h + pnto-R + ppi B0133 (PANTOATE-BETA-ALANINE-LIG-RXN) ((RIGHT REMOVE PROTON)) PAPA120 Phosphatidate phosphatase (n-C12:0) [c] : h2o + pa120 --> 12dgr120 + pi B1278 (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA120pp "Phosphatidate phosphatase (periplasmic, n-C12:0)" [p] : h2o + pa120 --> 12dgr120 + pi B1278 PAPA140 Phosphatidate phosphatase (n-C14:0) [c] : h2o + pa140 --> 12dgr140 + pi B1278 (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA140pp "Phosphatidate phosphatase (periplasmic, n-C14:0)" [p] : h2o + pa140 --> 12dgr140 + pi B1278 PAPA141 Phosphatidate phosphatase (n-C14:1) [c] : h2o + pa141 --> 12dgr141 + pi B1278 (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA141pp "Phosphatidate phosphatase (periplasmic, n-C14:1)" [p] : h2o + pa141 --> 12dgr141 + pi B1278 PAPA160 Phosphatidate phosphatase (n-C16:0) [c] : h2o + pa160 --> 12dgr160 + pi B1278 (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA160pp "Phosphatidate phosphatase (periplasmic, n-C16:0)" [p] : h2o + pa160 --> 12dgr160 + pi B1278 PAPA161 Phosphatidate phosphatase (n-C16:1) [c] : h2o + pa161 --> 12dgr161 + pi B1278 (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA161pp "Phosphatidate phosphatase (periplasmic, n-C16:1)" [p] : h2o + pa161 --> 12dgr161 + pi B1278 PAPA180 Phosphatidate phosphatase (n-C18:0) [c] : h2o + pa180 --> 12dgr180 + pi B1278 (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA180pp "Phosphatidate phosphatase (periplasmic, n-C18:0)" [p] : h2o + pa180 --> 12dgr180 + pi B1278 PAPA181 Phosphatidate phosphatase (n-C18:1) [c] : h2o + pa181 --> 12dgr181 + pi B1278 (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA181pp "Phosphatidate phosphatase (periplasmic, n-C18:1)" [p] : h2o + pa181 --> 12dgr181 + pi B1278 PAPPT3 "phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)" [c] : udcpp + ugmda --> uagmda + ump B0087 (PHOSNACMURPENTATRANS-RXN) (:EXPANDED-RXN-MATCH) PAPSR phosphoadenylyl-sulfate reductase (thioredoxin) [c] : paps + trdrd --> (2) h + pap + so3 + trdox ((B2762 AND B2582) OR (B2762 AND B3781)) (1.8.4.8-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) PAPSR2 phosphoadenylyl-sulfate reductase (glutaredoxin) [c] : grxrd + paps --> grxox + (2) h + pap + so3 ((B2762 AND B0849) OR (B2762 AND B1064) OR (B2762 AND B1654) OR (B2762 AND B3610)) PDE1 "3',5'-cyclic-nucleotide phosphodiesterase" [c] : camp + h2o --> amp + h B1489 (RXN0-5038) ((RIGHT REMOVE PROTON)) PDH pyruvate dehydrogenase [c] : coa + nad + pyr --> accoa + co2 + nadh (B0114 AND B0115 AND B0116) (PYRUVDEH-RXN) PDX5PO2 pyridoxine 5'-phosphate oxidase (anaerboic [c] : nad + pdx5p --> h + nadh + pydx5p PDX5POi pyridoxine 5'-phosphate oxidase [c] : o2 + pdx5p --> h2o2 + pydx5p B1638 (PNPOXI-RXN) PDX5PS Pyridoxine 5'-phosphate synthase [c] : dxyl5p + nad + phthr --> co2 + h + (2) h2o + nadh + pdx5p + pi (B0052 AND B2564) PDXPP Pyridoxine 5-phosphate phosphatase [c] : h2o + pdx5p --> pi + pydxn PE120abcpp "phosphatidylethanolamine transport via ABC system (n-C12:0, periplasm)" atp[c] + h2o[c] + pe120[c] --> adp[c] + h[c] + pe120[p] + pi[c] B0914 PE140abcpp "phosphatidylethanolamine transport via ABC system (n-C14:0, periplasm)" atp[c] + h2o[c] + pe140[c] --> adp[c] + h[c] + pe140[p] + pi[c] B0914 PE141abcpp "phosphatidylethanolamine transport via ABC system (n-C14:1, periplasm)" atp[c] + h2o[c] + pe141[c] --> adp[c] + h[c] + pe141[p] + pi[c] B0914 PE160abcpp "phosphatidylethanolamine transport via ABC system (n-C16:0, periplasm)" atp[c] + h2o[c] + pe160[c] --> adp[c] + h[c] + pe160[p] + pi[c] B0914 PE161abcpp "phosphatidylethanolamine transport via ABC system (n-C16:1, periplasm)" atp[c] + h2o[c] + pe161[c] --> adp[c] + h[c] + pe161[p] + pi[c] B0914 PE180abcpp "phosphatidylethanolamine transport via ABC system (n-C18:0, periplasm)" atp[c] + h2o[c] + pe180[c] --> adp[c] + h[c] + pe180[p] + pi[c] B0914 PE181abcpp "phosphatidylethanolamine transport via ABC system (n-C18:1, periplasm)" atp[c] + h2o[c] + pe181[c] --> adp[c] + h[c] + pe181[p] + pi[c] B0914 PEAMNOpp Phenethylamine oxidase [p] : h2o + o2 + peamn --> h2o2 + nh4 + pacald B1386 PEAMNtex phenethylamine transport via diffusion (extracellular to periplasm) peamn[e] <==> peamn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PERD Erythronate 4-phosphate (4per) dehydrogenase [c] : 4per + nad <==> h + nadh + ohpb B2320 (ERYTHRON4PDEHYDROG-RXN) PETNT161pp phosphoethanolamine transferase (c-C16:1) [p] : lipa + pe161 --> 12dgr161 + enlipa B3546 PETNT181pp phosphoethanolamine transferase (c-C16:1) [p] : lipa + pe181 --> 12dgr181 + enlipa B3546 PFK phosphofructokinase [c] : atp + f6p --> adp + fdp + h (B3916 OR B1723) (6PFRUCTPHOS-RXN) ((RIGHT REMOVE PROTON)) PFK_2 Phosphofructokinase [c] : atp + tag6p-D --> adp + h + tagdp-D B3916 (TAGAKIN-RXN) ((RIGHT REMOVE PROTON)) PFL pyruvate formate lyase [c] : coa + pyr --> accoa + for (((B0902 AND B0903) AND B2579) OR (B0902 AND B0903) OR (B0902 AND B3114) OR (B3951 AND B3952)) (PYRUVFORMLY-RXN) PG120abcpp "phosphatidylglycerol transport via ABC system (n-C12:0, periplasm)" atp[c] + h2o[c] + pg120[c] --> adp[c] + h[c] + pg120[p] + pi[c] B0914 PG140abcpp "phosphatidylglycerol transport via ABC system (n-C14:0, periplasm)" atp[c] + h2o[c] + pg140[c] --> adp[c] + h[c] + pg140[p] + pi[c] B0914 PG141abcpp "phosphatidylglycerol transport via ABC system (n-C14:1, periplasm)" atp[c] + h2o[c] + pg141[c] --> adp[c] + h[c] + pg141[p] + pi[c] B0914 PG160abcpp "phosphatidylglycerol transport via ABC system (n-C16:0, periplasm)" atp[c] + h2o[c] + pg160[c] --> adp[c] + h[c] + pg160[p] + pi[c] B0914 PG161abcpp "phosphatidylglycerol transport via ABC system (n-C16:1, periplasm)" atp[c] + h2o[c] + pg161[c] --> adp[c] + h[c] + pg161[p] + pi[c] B0914 PG180abcpp "phosphatidylglycerol transport via ABC system (n-C18:0, periplasm)" atp[c] + h2o[c] + pg180[c] --> adp[c] + h[c] + pg180[p] + pi[c] B0914 PG181abcpp "phosphatidylglycerol transport via ABC system (n-C18:1, periplasm)" atp[c] + h2o[c] + pg181[c] --> adp[c] + h[c] + pg181[p] + pi[c] B0914 PGAMT phosphoglucosamine mutase [c] : gam1p <==> gam6p B3176 (PHOSGLUCOSAMINEMUT-RXN) PGCD phosphoglycerate dehydrogenase [c] : 3pg + nad --> 3php + h + nadh B2913 (PGLYCDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) PGI glucose-6-phosphate isomerase [c] : g6p <==> f6p B4025 (PGLUCISOM-RXN) PGK phosphoglycerate kinase [c] : 3pg + atp <==> 13dpg + adp B2926 (PHOSGLYPHOS-RXN) PGL 6-phosphogluconolactonase [c] : 6pgl + h2o --> 6pgc + h B0767 (6PGLUCONOLACT-RXN) ((RIGHT REMOVE PROTON)) PGLYCP Phosphoglycolate phosphatase [c] : 2pglyc + h2o --> glyclt + pi B3385 (GPH-RXN) PGM phosphoglycerate mutase [c] : 2pg <==> 3pg (B3612 OR B4395 OR B0755) (3PGAREARR-RXN) PGMT phosphoglucomutase [c] : g1p <==> g6p (B0688 OR B2690) PGP120abcpp "phosphatidylglycerophosphate transport via ABC system (n-C12:0, periplasm)" atp[c] + h2o[c] + pgp120[c] --> adp[c] + h[c] + pgp120[p] + pi[c] B0914 PGP140abcpp "phosphatidylglycerophosphate transport via ABC system (n-C14:0, periplasm)" atp[c] + h2o[c] + pgp140[c] --> adp[c] + h[c] + pgp140[p] + pi[c] B0914 PGP141abcpp "phosphatidylglycerophosphate transport via ABC system (n-C14:1, periplasm)" atp[c] + h2o[c] + pgp141[c] --> adp[c] + h[c] + pgp141[p] + pi[c] B0914 PGP160abcpp "phosphatidylglycerophosphate transport via ABC system (n-C16:0, periplasm)" atp[c] + h2o[c] + pgp160[c] --> adp[c] + h[c] + pgp160[p] + pi[c] B0914 PGP161abcpp "phosphatidylglycerophosphate transport via ABC system (n-C16:1, periplasm)" atp[c] + h2o[c] + pgp161[c] --> adp[c] + h[c] + pgp161[p] + pi[c] B0914 PGP180abcpp "phosphatidylglycerophosphate transport via ABC system (n-C18:0, periplasm)" atp[c] + h2o[c] + pgp180[c] --> adp[c] + h[c] + pgp180[p] + pi[c] B0914 PGP181abcpp "phosphatidylglycerophosphate transport via ABC system (n-C18:1, periplasm)" atp[c] + h2o[c] + pgp181[c] --> adp[c] + h[c] + pgp181[p] + pi[c] B0914 PGPP120 phosphatidylglycerol phosphate phosphatase (n-C14:0) [c] : h2o + pgp120 --> pg120 + pi (B0418 OR B1278) (PGPPHOSPHA-RXN) PGPP120pp "phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:0)" [p] : h2o + pgp120 --> pg120 + pi (B1278 OR B0418) PGPP140 phosphatidylglycerol phosphate phosphatase (n-C14:0) [c] : h2o + pgp140 --> pg140 + pi (B0418 OR B1278) (PGPPHOSPHA-RXN) PGPP140pp "phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:0)" [p] : h2o + pgp140 --> pg140 + pi (B1278 OR B0418) PGPP141 phosphatidylglycerol phosphate phosphatase (n-C14:1) [c] : h2o + pgp141 --> pg141 + pi (B0418 OR B1278) (PGPPHOSPHA-RXN) PGPP141pp "phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:1)" [p] : h2o + pgp141 --> pg141 + pi (B0418 OR B1278) PGPP160 phosphatidylglycerol phosphate phosphatase (n-C16:0) [c] : h2o + pgp160 --> pg160 + pi (B0418 OR B1278) (PGPPHOSPHA-RXN) PGPP160pp "phosphatidylglycerol phosphate phosphatase (periplasm, n-C16:0)" [p] : h2o + pgp160 --> pg160 + pi (B0418 OR B1278) PGPP161 phosphatidylglycerol phosphate phosphatase (n-C16:1) [c] : h2o + pgp161 --> pg161 + pi (B0418 OR B1278) (PGPPHOSPHA-RXN) PGPP161pp "phosphatidylglycerol phosphate phosphatase (periplasm, n-C16:1)" [p] : h2o + pgp161 --> pg161 + pi (B1278 OR B0418) PGPP180 phosphatidylglycerol phosphate phosphatase (n-C18:0) [c] : h2o + pgp180 --> pg180 + pi (B0418 OR B1278) (PGPPHOSPHA-RXN) PGPP180pp "phosphatidylglycerol phosphate phosphatase (periplasm, n-C18:0)" [p] : h2o + pgp180 --> pg180 + pi (B1278 OR B0418) PGPP181 phosphatidylglycerol phosphate phosphatase (n-C18:1) [c] : h2o + pgp181 --> pg181 + pi (B0418 OR B1278) (PGPPHOSPHA-RXN) PGPP181pp "phosphatidylglycerol phosphate phosphatase (periplasm, n-C18:1)" [p] : h2o + pgp181 --> pg181 + pi (B0418 OR B1278) PGSA120 Phosphatidylglycerol synthase (n-C12:0) [c] : cdpdddecg + glyc3p --> cmp + h + pgp120 B1912 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA140 Phosphatidylglycerol synthase (n-C14:0) [c] : cdpdtdecg + glyc3p --> cmp + h + pgp140 B1912 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA141 Phosphatidylglycerol synthase (n-C14:1) [c] : cdpdtdec7eg + glyc3p --> cmp + h + pgp141 B1912 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA160 Phosphatidylglycerol synthase (n-C16:0) [c] : cdpdhdecg + glyc3p --> cmp + h + pgp160 B1912 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA161 Phosphatidylglycerol synthase (n-C16:1) [c] : cdpdhdec9eg + glyc3p --> cmp + h + pgp161 B1912 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA180 Phosphatidylglycerol synthase (n-C18:0) [c] : cdpdodecg + glyc3p --> cmp + h + pgp180 B1912 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA181 Phosphatidylglycerol synthase (n-C18:1) [c] : cdpdodec11eg + glyc3p --> cmp + h + pgp181 B1912 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PHEMEabcpp protoheme transport via ABC system (periplasm) atp[c] + h2o[c] + pheme[c] --> adp[c] + h[c] + pheme[p] + pi[c] (B2201 AND B2200 AND B2199) (TRANS-RXN0-162) ((RIGHT REMOVE PROTON)) PHEMEtiex protoheme transport irreversible out via diffusion (periplasm to extracellular) pheme[p] --> pheme[e] PHEt2rpp L-phenylalanine reversible transport via proton symport (periplasm) h[p] + phe-L[p] <==> h[c] + phe-L[c] (B0576 OR B0112) (TRANS-RXN-56) PHETA1 phenylalanine transaminase [c] : akg + phe-L <==> glu-L + phpyr (B3770 OR B0928 OR B4054) (PHEAMINOTRANS-RXN) PHEtex L-phenylalanine transport via diffusion (extracellular to periplasm) phe-L[e] <==> phe-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PHETRS Phenylalanyl-tRNA synthetase [c] : atp + phe-L + trnaphe --> amp + phetrna + ppi (B1713 AND B1714) (PHENYLALANINE--TRNA-LIGASE-RXN) PHYTSpp Phytase (periplasm) [p] : (6) h2o + minohp --> inost + (6) pi B0980 PIt2rpp phosphate reversible transport via symport (periplasm) h[p] + pi[p] <==> h[c] + pi[c] (B2987 OR B3493) (TRANS-RXN-114) PItex phosphate transport via diffusion (extracellular to periplasm) pi[e] <==> pi[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PIuabcpp "phosphate transport via ABC system (uptake, periplasm)" atp[c] + h2o[c] + pi[p] --> adp[c] + h[c] + (2) pi[c] (B3726 AND B3725 AND B3727 AND B3728) PLIPA1A120pp "Phospholipase A1 (phosphatidate, n-C12:0) (periplasm)" [p] : h2o + pa120 --> 2ddecg3p + ddca B3821 (:UNMAPPED-CPDS) PLIPA1A140pp "Phospholipase A1 (phosphatidate, n-C14:0) (periplasm)" [p] : h2o + pa140 --> 2tdecg3p + ttdca B3821 (:UNMAPPED-CPDS) PLIPA1A141pp "Phospholipase A1 (phosphatidate, n-C14:1) (periplasm)" [p] : h2o + pa141 --> 2tdec7eg3p + ttdcea B3821 (:UNMAPPED-CPDS) PLIPA1A160pp "Phospholipase A1 (phosphatidate, n-C16:0) (periplasm)" [p] : h2o + pa160 --> 2hdecg3p + hdca B3821 (:UNMAPPED-CPDS) PLIPA1A161pp "Phospholipase A1 (phosphatidate, n-C16:1) (periplasm)" [p] : h2o + pa161 --> 2hdec9eg3p + hdcea B3821 (:UNMAPPED-CPDS) PLIPA1A180pp "Phospholipase A1 (phosphatidate, n-C18:0) (periplasm)" [p] : h2o + pa180 --> 2odecg3p + ocdca B3821 (:UNMAPPED-CPDS) PLIPA1A181pp "Phospholipase A1 (phosphatidate, n-C18:1) (periplasm)" [p] : h2o + pa181 --> 2odec11eg3p + ocdcea B3821 (:UNMAPPED-CPDS) PLIPA1E120pp "Phospholipase A1 (phosphatidylethanolamine, n-C12:0) (periplasm)" [p] : h2o + pe120 --> 2agpe120 + ddca + h B3821 PLIPA1E140pp "Phospholipase A1 (phosphatidylethanolamine, n-C14:0) (periplasm)" [p] : h2o + pe140 --> 2agpe140 + h + ttdca B3821 PLIPA1E141pp "Phospholipase A1 (phosphatidylethanolamine, n-C14:1) (periplasm)" [p] : h2o + pe141 --> 2agpe141 + h + ttdcea B3821 (:UNMAPPED-CPDS) PLIPA1E160pp "Phospholipase A1 (phosphatidylethanolamine, n-C16:0) (periplasm)" [p] : h2o + pe160 --> 2agpe160 + h + hdca B3821 PLIPA1E161pp "Phospholipase A1 (phosphatidylethanolamine, n-C16:1) (periplasm)" [p] : h2o + pe161 --> 2agpe161 + h + hdcea B3821 PLIPA1E180pp "Phospholipase A1 (phosphatidylethanolamine, n-C18:0) (periplasm)" [p] : h2o + pe180 --> 2agpe180 + h + ocdca B3821 PLIPA1E181pp "Phospholipase A1 (phosphatidylethanolamine, n-C18:1) (periplasm)" [p] : h2o + pe181 --> 2agpe181 + h + ocdcea B3821 PLIPA1G120pp "Phospholipase A1 (phosphatidylglycerol, n-C12:0) (periplasm)" [p] : h2o + pg120 --> 2agpg120 + ddca + h B3821 (:UNMAPPED-CPDS) PLIPA1G140pp "Phospholipase A1 (phosphatidylglycerol, n-C14:0) (periplasm)" [p] : h2o + pg140 --> 2agpg140 + h + ttdca B3821 (:UNMAPPED-CPDS) PLIPA1G141pp "Phospholipase A1 (phosphatidylglycerol, n-C14:1) (periplasm)" [p] : h2o + pg141 --> 2agpg141 + h + ttdcea B3821 (:UNMAPPED-CPDS) PLIPA1G160pp "Phospholipase A1 (phosphatidylglycerol, n-C16:0) (periplasm)" [p] : h2o + pg160 --> 2agpg160 + h + hdca B3821 PLIPA1G161pp "Phospholipase A1 (phosphatidylglycerol, n-C16:1) (periplasm)" [p] : h2o + pg161 --> 2agpg161 + h + hdcea B3821 PLIPA1G180pp "Phospholipase A1 (phosphatidylglycerol, n-C18:0) (periplasm)" [p] : h2o + pg180 --> 2agpg180 + h + ocdca B3821 (:UNMAPPED-CPDS) PLIPA1G181pp "Phospholipase A1 (phosphatidylglycerol, n-C18:1) (periplasm)" [p] : h2o + pg181 --> 2agpg181 + h + ocdcea B3821 (:UNMAPPED-CPDS) PLIPA2A120pp "Phospholipase A2 (phosphatidate, n-C12:0) (periplasm)" [p] : h2o + pa120 --> 1ddecg3p + ddca + h B3821 PLIPA2A140pp "Phospholipase A2 (phosphatidate, n-C14:0) (periplasm)" [p] : h2o + pa140 --> 1tdecg3p + h + ttdca B3821 PLIPA2A141pp "Phospholipase A2 (phosphatidate, n-C14:1) (periplasm)" [p] : h2o + pa141 --> 1tdec7eg3p + h + ttdcea B3821 (:UNMAPPED-CPDS) PLIPA2A160pp "Phospholipase A2 (phosphatidate, n-C16:0) (periplasm)" [p] : h2o + pa160 --> 1hdecg3p + h + hdca B3821 PLIPA2A161pp "Phospholipase A2 (phosphatidate, n-C16:1) (periplasm)" [p] : h2o + pa161 --> 1hdec9eg3p + h + hdcea B3821 PLIPA2A180pp "Phospholipase A2 (phosphatidate, n-C18:0) (periplasm)" [p] : h2o + pa180 --> 1odecg3p + h + ocdca B3821 PLIPA2A181pp "Phospholipase A2 (phosphatidate, n-C18:1) (periplasm)" [p] : h2o + pa181 --> 1odec11eg3p + h + ocdcea B3821 PLIPA2E120pp "Phospholipase A2 (phosphatidylethanolamine, n-C12:0) (periplasm)" [p] : h2o + pe120 --> 1agpe120 + ddca + h B3821 (:UNMAPPED-CPDS) PLIPA2E140pp "Phospholipase A2 (phosphatidylethanolamine, n-C14:0) (periplasm)" [p] : h2o + pe140 --> 1agpe140 + h + ttdca B3821 (:UNMAPPED-CPDS) PLIPA2E141pp "Phospholipase A2 (phosphatidylethanolamine, n-C14:1) (periplasm)" [p] : h2o + pe141 --> 1agpe141 + h + ttdcea B3821 (:UNMAPPED-CPDS) PLIPA2E160pp "Phospholipase A2 (phosphatidylethanolamine, n-C16:0) (periplasm)" [p] : h2o + pe160 --> 1agpe160 + h + hdca B3821 PLIPA2E161pp "Phospholipase A2 (phosphatidylethanolamine, n-C16:1) (periplasm)" [p] : h2o + pe161 --> 1agpe161 + h + hdcea B3821 PLIPA2E180pp "Phospholipase A2 (phosphatidylethanolamine, n-C18:0) (periplasm)" [p] : h2o + pe180 --> 1agpe180 + h + ocdca B3821 (:UNMAPPED-CPDS) PLIPA2E181pp "Phospholipase A2 (phosphatidylethanolamine, n-C18:1) (periplasm)" [p] : h2o + pe181 --> 1agpe181 + h + ocdcea B3821 PLIPA2G120pp "Phospholipase A2 (phosphatidylglycerol, n-C12:0) (periplasm)" [p] : h2o + pg120 --> 1agpg120 + ddca + h B3821 (:UNMAPPED-CPDS) PLIPA2G140pp "Phospholipase A2 (phosphatidylglycerol, n-C14:0) (periplasm)" [p] : h2o + pg140 --> 1agpg140 + h + ttdca B3821 (:UNMAPPED-CPDS) PLIPA2G141pp "Phospholipase A2 (phosphatidylglycerol, n-C14:1) (periplasm)" [p] : h2o + pg141 --> 1agpg141 + h + ttdcea B3821 (:UNMAPPED-CPDS) PLIPA2G160pp "Phospholipase A2 (phosphatidylglycerol, n-C16:0) (periplasm)" [p] : h2o + pg160 --> 1agpg160 + h + hdca B3821 (:UNMAPPED-CPDS) PLIPA2G161pp "Phospholipase A2 (phosphatidylglycerol, n-C16:1) (periplasm)" [p] : h2o + pg161 --> 1agpg161 + h + hdcea B3821 (:UNMAPPED-CPDS) PLIPA2G180pp "Phospholipase A2 (phosphatidylglycerol, n-C18:0) (periplasm)" [p] : h2o + pg180 --> 1agpg180 + h + ocdca B3821 (:UNMAPPED-CPDS) PLIPA2G181pp "Phospholipase A2 (phosphatidylglycerol, n-C18:1) (periplasm)" [p] : h2o + pg181 --> 1agpg181 + h + ocdcea B3821 PMANM phosphomannomutase [c] : man1p <==> man6p B2048 (PHOSMANMUT-RXN) PMDPHT pyrimidine phosphatase [c] : 5aprbu + h2o --> 4r5au + pi (RIBOPHOSPHAT-RXN) PMPK phosphomethylpyrimidine kinase [c] : 4ampm + atp --> 2mahmp + adp B2103 (PYRIMSYN3-RXN) PNTK pantothenate kinase [c] : atp + pnto-R --> 4ppan + adp + h B3974 (PANTOTHENATE-KIN-RXN) ((RIGHT REMOVE PROTON)) PNTOt4pp Pantothenate sodium symporter (periplasm) na1[p] + pnto-R[p] --> na1[c] + pnto-R[c] B3258 (TRANS-RXN-117) PNTOtex Pantothenate transport via diffusion (extracellular to periplasm) pnto-R[e] <==> pnto-R[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) POX pyruvate oxidase [c] : h2o + pyr + q8 --> ac + co2 + q8h2 B0871 (PYRUVOXID-RXN) PPA inorganic diphosphatase [c] : h2o + ppi --> h + (2) pi (B4226 OR B2744 OR B2502) (INORGPYROPHOSPHAT-RXN) ((RIGHT REMOVE PROTON)) PPA2 inorganic triphosphatase [c] : h2o + pppi --> h + pi + ppi (B2502 OR B2744) (TRIPHOSPHATASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) PPAKr Propionate kinase [c] : adp + ppap <==> atp + ppa B3115 (PROPKIN-RXN) PPALtex propanal transport via diffusion (extracellular to periplasm) ppal[e] <==> ppal[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PPALtpp propanal transport via channel (periplasm) ppal[c] <==> ppal[p] PPAt4pp Na+/Propionate symporter (periplasm) na1[p] + ppa[p] --> na1[c] + ppa[c] B1015 PPAtex propionate transport via diffusion ppa[e] <==> ppa[p] (B1377 OR B0929 OR B2215 OR B0241) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PPBNGS porphobilinogen synthase [c] : (2) 5aop --> h + (2) h2o + ppbng B0369 (PORPHOBILSYNTH-RXN) ((RIGHT REMOVE PROTON)) PPC phosphoenolpyruvate carboxylase [c] : co2 + h2o + pep --> h + oaa + pi B3956 (PEPCARBOX-RXN) ((RIGHT REMOVE PROTON)) PPCDC phosphopantothenoylcysteine decarboxylase [c] : 4ppcys + h --> co2 + pan4p B3639 (P-PANTOCYSDECARB-RXN) ((LEFT REMOVE PROTON)) PPCK phosphoenolpyruvate carboxykinase [c] : atp + oaa --> adp + co2 + pep B3403 (PEPCARBOXYKIN-RXN) PPCSCT Propanoyl-CoA: succinate CoA-transferase [c] : ppcoa + succ --> ppa + succoa B2920 (RXN0-268) PPGPPDP "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase" [c] : h2o + ppgpp --> gdp + ppi B3650 (PPGPPSYN-RXN) PPK2r polyphosphate kinase [c] : atp + ppi <==> adp + pppi B2501 PPKr polyphosphate kinase [c] : atp + pi <==> adp + ppi B2501 PPM phosphopentomutase [c] : r1p <==> r5p (B4383 OR B3380) (PPENTOMUT-RXN) PPM2 phosphopentomutase 2 (deoxyribose) [c] : 2dr1p <==> 2dr5p B4383 (D-PPENTOMUT-RXN) PPNCL2 phosphopantothenate-cysteine ligase [c] : 4ppan + ctp + cys-L --> 4ppcys + cmp + h + ppi B3639 (P-PANTOCYSLIG-RXN) ((RIGHT REMOVE PROTON)) PPND prephenate dehydrogenase [c] : nad + pphn --> 34hpp + co2 + nadh B2600 (PREPHENATEDEHYDROG-RXN) PPNDH prephenate dehydratase [c] : h + pphn --> co2 + h2o + phpyr B2599 (PREPHENATEDEHYDRAT-RXN) ((LEFT REMOVE PROTON)) PPPGO protoporphyrinogen oxidase (aerobic) [c] : (1.5) o2 + pppg9 --> (3) h2o + ppp9 B3850 (PROTOPORGENOXI-RXN) PPPGO3 protoporphyrinogen oxidase (anaerobic) [c] : (3) fum + pppg9 --> ppp9 + (3) succ B3850 PPPNDO Phenylpropanoate Dioxygenase [c] : h + nadh + o2 + pppn --> cechddd + nad (B2538 AND B2539 AND B2540 AND B2542) (HCAMULTI-RXN) PPPNt2rpp "3-phenylpropionate transport via proton symport, reversible (periplasm)" h[p] + pppn[p] <==> h[c] + pppn[c] B2536 PPPNtex 3-phenylpropionate transport via diffusion (extracellular to periplasm) pppn[e] <==> pppn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PPS phosphoenolpyruvate synthase [c] : atp + h2o + pyr --> amp + (2) h + pep + pi B1702 (PEPSYNTH-RXN) ((RIGHT REMOVE PROTON)) PPTHpp Phosphonate hydrogenase (periplasm) [p] : h2o + ppt --> h2 + pi B0383 PPTtex Phosphonate transport via diffusion (extracellular to periplasm) ppt[e] <==> ppt[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PRAGSr phosphoribosylglycinamide synthase [c] : atp + gly + pram <==> adp + gar + h + pi B4005 (GLYRIBONUCSYN-RXN) ((RIGHT REMOVE PROTON)) PRAIi phosphoribosylanthranilate isomerase (irreversible) [c] : pran --> 2cpr5p B1262 (PRAISOM-RXN) PRAIS phosphoribosylaminoimidazole synthase [c] : atp + fpram --> adp + air + (2) h + pi B2499 (AIRS-RXN) ((RIGHT REMOVE PROTON)) PRAMPC phosphoribosyl-AMP cyclohydrolase [c] : h2o + prbamp --> prfp B2026 (HISTCYCLOHYD-RXN) PRASCS phosphoribosylaminoimidazolesuccinocarboxamide synthase [c] : 5aizc + asp-L + atp <==> 25aics + adp + h + pi B2476 (SAICARSYN-RXN) ((RIGHT REMOVE PROTON)) PRATPP phosphoribosyl-ATP pyrophosphatase [c] : h2o + prbatp --> h + ppi + prbamp B2026 (HISTPRATPHYD-RXN) ((RIGHT REMOVE PROTON)) PRFGS phosphoribosylformylglycinamidine synthase [c] : atp + fgam + gln-L + h2o --> adp + fpram + glu-L + h + pi B2557 (FGAMSYN-RXN) ((RIGHT REMOVE PROTON)) PRMICI 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase [c] : prfp <==> prlp B2024 (PRIBFAICARPISOM-RXN) PROabcpp L-proline transport via ABC system (periplasm) atp[c] + h2o[c] + pro-L[p] --> adp[c] + h[c] + pi[c] + pro-L[c] (B2677 AND B2678 AND B2679) (ABC-26-RXN) ((RIGHT REMOVE PROTON)) PROD2 Proline dehydrogenase [c] : fad + pro-L --> 1pyr5c + fadh2 + h B1014 (RXN-821) ((RIGHT REMOVE PROTON)) PROGLYabcpp L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm) atp[c] + h2o[c] + progly[p] --> adp[c] + h[c] + pi[c] + progly[c] (B3544 AND B3543 AND B3542 AND B3541 AND B3540) (:UNMAPPED-CPDS) PROGLYtex L-Prolinylglycine transport via diffusion (extracellular to periplasm) progly[e] <==> progly[p] (B0241 OR B0929 OR B1377 OR B2215) (:UNMAPPED-CPDS) PROt2rpp L-proline reversible transport via proton symport (periplasm) h[p] + pro-L[p] <==> h[c] + pro-L[c] B4111 (TRANS-RXN-29) PROt4pp Na+/Proline-L symporter (periplasm) na1[p] + pro-L[p] --> na1[c] + pro-L[c] B1015 (TRANS-RXN-118) PROtex L-proline transport via diffusion (extracellular to periplasm) pro-L[e] <==> pro-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PROTRS Prolyl-tRNA synthetase [c] : atp + pro-L + trnapro --> amp + ppi + protrna B0194 (PROLINE--TRNA-LIGASE-RXN) PRPPS phosphoribosylpyrophosphate synthetase [c] : atp + r5p <==> amp + h + prpp B1207 (PRPPSYN-RXN) ((RIGHT REMOVE PROTON)) PSCLYSt2pp psicoselysine transport via proton symport (periplasm) h[p] + psclys[p] --> h[c] + psclys[c] B3370 PSCLYStex psicoselysine transporter via diffusion (extracellular) psclys[e] <==> psclys[p] (B2215 OR B1377 OR B0929 OR B0241) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PSCVT 3-phosphoshikimate 1-carboxyvinyltransferase [c] : pep + skm5p <==> 3psme + pi B0908 (2.5.1.19-RXN) PSD120 Phosphatidylserine decarboxylase (n-C12:0) [c] : h + ps120 --> co2 + pe120 B4160 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD140 Phosphatidylserine decarboxylase (n-C14:0) [c] : h + ps140 --> co2 + pe140 B4160 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD141 Phosphatidylserine decarboxylase (n-C14:1) [c] : h + ps141 --> co2 + pe141 B4160 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD160 Phosphatidylserine decarboxylase (n-C16:0) [c] : h + ps160 --> co2 + pe160 B4160 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD161 Phosphatidylserine decarboxylase (n-C16:1) [c] : h + ps161 --> co2 + pe161 B4160 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD180 Phosphatidylserine decarboxylase (n-C18:0) [c] : h + ps180 --> co2 + pe180 B4160 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD181 Phosphatidylserine decarboxylase (n-C18:1) [c] : h + ps181 --> co2 + pe181 B4160 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSERT phosphoserine transaminase [c] : 3php + glu-L --> akg + pser-L B0907 (PSERTRANSAM-RXN) PSERtex phospho-L-serine transport via diffusion (extracellular to periplasm) pser-L[e] <==> pser-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PSP_L phosphoserine phosphatase (L-serine) [c] : h2o + pser-L --> pi + ser-L B4388 (RXN0-5114) PSP_Lpp phospho-L-serine phosphatase (periplasmic) [p] : h2o + pser-L --> pi + ser-L B4055 PSSA120 Phosphatidylserine syntase (n-C12:0) [c] : cdpdddecg + ser-L --> cmp + h + ps120 B2585 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA140 Phosphatidylserine syntase (n-C14:0) [c] : cdpdtdecg + ser-L --> cmp + h + ps140 B2585 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA141 Phosphatidylserine syntase (n-C14:1) [c] : cdpdtdec7eg + ser-L --> cmp + h + ps141 B2585 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA160 Phosphatidylserine syntase (n-C16:0) [c] : cdpdhdecg + ser-L --> cmp + h + ps160 B2585 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA161 Phosphatidylserine syntase (n-C16:1) [c] : cdpdhdec9eg + ser-L --> cmp + h + ps161 B2585 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA180 Phosphatidylserine syntase (n-C18:0) [c] : cdpdodecg + ser-L --> cmp + h + ps180 B2585 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA181 Phosphatidylserine syntase (n-C18:1) [c] : cdpdodec11eg + ser-L --> cmp + h + ps181 B2585 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PTA2 Phosphate acetyltransferase [c] : pi + ppcoa --> coa + ppap B2297 (PTAALT-RXN) PTAr phosphotransacetylase [c] : accoa + pi <==> actp + coa (B2297 OR B2458) (PHOSACETYLTRANS-RXN) PTHRpp phospho-L-threonine phosphatase (periplasmic) [p] : h2o + thrp --> pi + thr-L B4055 PTPATi pantetheine-phosphate adenylyltransferase [c] : atp + h + pan4p --> dpcoa + ppi B3634 (PANTEPADENYLYLTRAN-RXN) ((LEFT REMOVE PROTON)) PTRCabcpp putrescine transport via ABC system (periplasm) atp[c] + h2o[c] + ptrc[p] --> adp[c] + h[c] + pi[c] + ptrc[c] ((B0854 AND B0855 AND B0856 AND B0857) OR (B1126 AND B1125 AND B1124 AND B1123) OR (B1440 AND B1441 AND B1442 AND B1443)) (ABC-25-RXN) ((RIGHT REMOVE PROTON)) PTRCORNt7pp putrescine/ornithine antiporter (periplasm) orn[c] + ptrc[p] <==> orn[p] + ptrc[c] B0692 PTRCt2pp putrescine transport in via proton symport h[p] + ptrc[p] --> h[c] + ptrc[c] (B1296 OR B0692) (TRANS-RXN-69) PTRCTA Putrescine Transaminase [c] : akg + ptrc --> 4abutn + glu-L B3073 (PUTTRANSAM-RXN) PTRCtex putrescine transport via diffusion (extracellular to periplasm) ptrc[e] <==> ptrc[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) PUNP1 purine-nucleoside phosphorylase (Adenosine) [c] : adn + pi <==> ade + r1p B4384 (ADENPHOSPHOR-RXN) PUNP2 purine-nucleoside phosphorylase (Deoxyadenosine) [c] : dad-2 + pi <==> 2dr1p + ade B4384 (DEOXYADENPHOSPHOR-RXN) PUNP3 purine-nucleoside phosphorylase (Guanosine) [c] : gsn + pi <==> gua + r1p (B2407 OR B4384) (GUANPHOSPHOR-RXN) PUNP4 purine-nucleoside phosphorylase (Deoxyguanosine) [c] : dgsn + pi <==> 2dr1p + gua (B2407 OR B4384) (DEOXYGUANPHOSPHOR-RXN) PUNP5 purine-nucleoside phosphorylase (Inosine) [c] : ins + pi <==> hxan + r1p (B2407 OR B4384) (INOPHOSPHOR-RXN) PUNP6 purine-nucleoside phosphorylase (Deoxyinosine) [c] : din + pi <==> 2dr1p + hxan (B2407 OR B4384) (DEOXYINOPHOSPHOR-RXN) PUNP7 purine-nucleoside phosphorylase (Xanthosine) [c] : pi + xtsn <==> r1p + xan B2407 (XANTHOSINEPHOSPHORY-RXN) PYAM5PO pyridoxamine 5'-phosphate oxidase [c] : h2o + o2 + pyam5p --> h2o2 + nh4 + pydx5p B1638 (PMPOXI-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) PYDAMK pyridoxamine kinase [c] : atp + pydam --> adp + h + pyam5p B2418 (PYRAMKIN-RXN) ((RIGHT REMOVE PROTON)) PYDXK pyridoxal kinase [c] : atp + pydx --> adp + h + pydx5p (B2418 OR B1636) (PYRIDOXKIN-RXN) ((RIGHT REMOVE PROTON)) PYDXNK pyridoxine kinase [c] : atp + pydxn --> adp + h + pdx5p B2418 (PNKIN-RXN) ((RIGHT REMOVE PROTON)) PYDXPP Pyridoxal 5-phosphate phosphatase [c] : h2o + pydx5p --> pi + pydx (3.1.3.74-RXN) PYK pyruvate kinase [c] : adp + h + pep --> atp + pyr (B1854 OR B1676) (PEPDEPHOS-RXN) ((LEFT REMOVE PROTON)) PYNP2r pyrimidine-nucleoside phosphorylase (uracil) [c] : pi + uri <==> r1p + ura B3831 (URPHOS-RXN) PYRt2rpp pyruvate reversible transport via proton symport (periplasm) h[p] + pyr[p] <==> h[c] + pyr[c] PYRtex pyruvate transport via diffusion (extracellular to periplasm) pyr[e] <==> pyr[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) QMO2 quinol monooxygenase (Ubiquinol-8) [c] : (2) o2 + q8h2 --> (2) h + (2) o2s + q8 B3029 QMO3 quinol monooxygenase (menaquinol 8) [c] : mql8 + (2) o2 --> (2) h + mqn8 + (2) o2s B3029 QULNS quinolinate synthase [c] : dhap + iasp --> (2) h2o + pi + quln B0750 (QUINOLINATE-SYNTHA-RXN) R15BPK "ribose-1,5-bisphosphokinase" [c] : atp + r15bp --> adp + prpp B4094 (RXN0-1401) R1PK ribose 1-phosphokinase [c] : atp + r1p --> adp + h + r15bp (RXN0-1402) ((RIGHT REMOVE PROTON)) R5PP ribose 5-phosphate phosphatase [c] : h2o + r5p --> pi + rib-D B0822 (SUGAR-PHOSPHATASE-RXN) (:EXPANDED-RXN-MATCH) R5PPpp ribose 5-phosphate phosphatase [p] : h2o + r5p --> pi + rib-D B4055 R5Ptex Ribose 5-phosphate transport via diffusion (extracellular to periplasm) r5p[e] <==> r5p[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) RBFK riboflavin kinase [c] : atp + ribflv --> adp + fmn + h B0025 (RIBOFLAVINKIN-RXN) ((RIGHT REMOVE PROTON)) RBFSa riboflavin synthase [c] : 4r5au + db4p --> dmlz + (2) h2o + pi B1662 (LUMAZINESYN-RXN) RBFSb riboflavin synthase [c] : (2) dmlz --> 4r5au + ribflv B0415 (RIBOFLAVIN-SYN-RXN) RBK ribokinase [c] : atp + rib-D --> adp + h + r5p B3752 (RIBOKIN-RXN) ((RIGHT REMOVE PROTON)) RBK_L1 L-ribulokinase (L-ribulose) [c] : atp + rbl-L --> adp + h + ru5p-L B0063 (RXN0-5116) ((RIGHT REMOVE PROTON)) RBP4E L-ribulose-phosphate 4-epimerase [c] : ru5p-L <==> xu5p-D (B0061 OR B4198 OR B3583) (RIBULPEPIM-RXN) RHAT1 rhamnosyltransferase I (LPS core biosynthesis) [c] : dtdprmn + kphphhlipa --> dtdp + h + icolipa B3629 (:UNMAPPED-CPDS) RHCCE S-ribosylhomocysteine cleavage enzyme [c] : rhcys --> dhptd + hcys-L B2687 (RIBOSYLHOMOCYSTEINASE-RXN) (:METACYC) RIBabcpp D-ribose transport via ABC system (periplasm) atp[c] + h2o[c] + rib-D[p] --> adp[c] + h[c] + pi[c] + rib-D[c] ((B4231 AND B4227 AND B4485 AND B4230) OR (B3749 AND B3751 AND B3750 AND B3748) OR (B4087 AND B4088 AND B4086)) (ABC-28-RXN) ((RIGHT REMOVE PROTON)) RIBtex ribose transport via diffusion (extracellular to periplasm) rib-D[e] <==> rib-D[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) RMI L-rhamnose isomerase [c] : rmn <==> rml B3903 (RHAMNISOM-RXN) RMK rhamnulokinase [c] : atp + rml --> adp + h + rml1p B3904 (RHAMNULOKIN-RXN) ((RIGHT REMOVE PROTON)) RMNtex L-rhamnose transport via diffusion (extracellular to periplasm) rmn[e] <==> rmn[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) RMNtpp L-rhamnose transport via proton symport (periplasm) h[p] + rmn[p] --> h[c] + rmn[c] B3907 (TRANS-RXN-112) RMPA Rhamnulose-1-phosphate aldolase [c] : rml1p <==> dhap + lald-L B3902 (RHAMNULPALDOL-RXN) RNDR1 ribonucleoside-diphosphate reductase (ADP) [c] : adp + trdrd --> dadp + h2o + trdox (((B2234 AND B2235) AND B2582) OR ((B2234 AND B2235) AND B3781)) (ADPREDUCT-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN) (:EXPANDED-RXN-MATCH) RNDR1b ribonucleoside-diphosphate reductase (ADP) (glutaredoxin) [c] : adp + grxrd --> dadp + grxox + h2o ((B1064 AND (B2675 AND B2676)) OR (B3610 AND (B2675 AND B2676)) OR (B1654 AND (B2675 AND B2676)) OR (B0849 AND (B2675 AND B2676))) (RXN0-747) (:EXPANDED-RXN-MATCH) RNDR2 ribonucleoside-diphosphate reductase (GDP) [c] : gdp + trdrd --> dgdp + h2o + trdox (((B2234 AND B2235) AND B3781) OR ((B2234 AND B2235) AND B2582)) (GDPREDUCT-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN) (:EXPANDED-RXN-MATCH) RNDR2b ribonucleoside-diphosphate reductase (GDP) (glutaredoxin) [c] : gdp + grxrd --> dgdp + grxox + h2o ((B0849 AND (B2675 AND B2676)) OR (B3610 AND (B2675 AND B2676)) OR (B1064 AND (B2675 AND B2676)) OR (B1654 AND (B2675 AND B2676))) (RXN0-748) (:EXPANDED-RXN-MATCH) RNDR3 ribonucleoside-diphosphate reductase (CDP) [c] : cdp + trdrd --> dcdp + h2o + trdox (((B2234 AND B2235) AND B3781) OR ((B2234 AND B2235) AND B2582)) (RIBONUCLEOSIDE-DIP-REDUCTI-RXN CDPREDUCT-RXN) (:EXPANDED-RXN-MATCH) RNDR3b ribonucleoside-diphosphate reductase (CDP) (glutaredoxin) [c] : cdp + grxrd --> dcdp + grxox + h2o ((B0849 AND (B2675 AND B2676)) OR (B3610 AND (B2675 AND B2676)) OR (B1654 AND (B2675 AND B2676)) OR (B1064 AND (B2675 AND B2676))) (RIBONUCLEOSIDE-DIP-REDUCTII-RXN) (:EXPANDED-RXN-MATCH) RNDR4 ribonucleoside-diphosphate reductase (UDP) [c] : trdrd + udp --> dudp + h2o + trdox (((B2234 AND B2235) AND B3781) OR ((B2234 AND B2235) AND B2582)) (RIBONUCLEOSIDE-DIP-REDUCTI-RXN UDPREDUCT-RXN) (:EXPANDED-RXN-MATCH) RNDR4b ribonucleoside-diphosphate reductase (UDP) (glutaredoxin) [c] : grxrd + udp --> dudp + grxox + h2o ((B0849 AND (B2675 AND B2676)) OR (B1064 AND (B2675 AND B2676)) OR (B3610 AND (B2675 AND B2676)) OR (B1654 AND (B2675 AND B2676))) (RXN0-722) (:EXPANDED-RXN-MATCH) RNTR1c ribonucleoside-triphosphate reductase (ATP) (flavodoxin) [c] : atp + fldrd --> datp + fldox + h2o ((B0684 AND B4238) OR (B0684 AND B3924 AND B4238 AND B4237) OR (B2895 AND B3924 AND B4238 AND B4237) OR (B2895 AND B4238)) (RXN0-745) RNTR2c ribonucleoside-triphosphate reductase (GTP) (flavodoxin) [c] : fldrd + gtp --> dgtp + fldox + h2o ((B0684 AND B3924 AND B4238 AND B4237) OR (B0684 AND B4238) OR (B2895 AND B4238) OR (B2895 AND B3924 AND B4238 AND B4237)) (RXN0-746) RNTR3c ribonucleoside-triphosphate reductase (CTP) (flavodoxin) [c] : ctp + fldrd --> dctp + fldox + h2o ((B0684 AND B4238) OR (B2895 AND B3924 AND B4238 AND B4237) OR (B2895 AND B4238) OR (B0684 AND B3924 AND B4238 AND B4237)) (RXN0-723) RNTR4c ribonucleoside-triphosphate reductase (UTP) (flavodoxin) [c] : fldrd + utp --> dutp + fldox + h2o ((B0684 AND B4238) OR (B2895 AND B3924 AND B4238 AND B4237) OR (B0684 AND B3924 AND B4238 AND B4237) OR (B2895 AND B4238)) (RXN0-724) RPE ribulose 5-phosphate 3-epimerase [c] : ru5p-D <==> xu5p-D (B3386 OR B4301) (RIBULP3EPIM-RXN) RPI ribose-5-phosphate isomerase [c] : r5p <==> ru5p-D (B2914 OR B4090) (RIB5PISOM-RXN) RZ5PP alpha-ribazole 5-phosphate phosphatase [c] : 5prdmbz + h2o --> pi + rdmbzi B0638 (RIBAZOLEPHOSPHAT-RXN) S7PI sedoheptulose 7-phosphate isomerase [c] : s7p --> gmhep7p B0222 (RXN0-4301) SADH Succinylarginine dihydrolase [c] : (2) h + (2) h2o + sucarg --> co2 + (2) nh4 + sucorn B1745 (SUCCARGDIHYDRO-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) SADT2 Sulfate adenyltransferase [c] : atp + gtp + h2o + so4 --> aps + gdp + pi + ppi (B2751 AND B2752) SARCOX sarcosine oxidase [c] : h2o + o2 + sarcs --> fald + gly + h2o2 B1059 (SARCOX-RXN) (:METACYC) SBTPD sorbitol-6-phosphate dehydrogenase [c] : nad + sbt6p <==> f6p + h + nadh B2705 (SORB6PDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) SBTptspp D-sorbitol transport via PEP:Pyr PTS (periplasm) pep[c] + sbt-D[p] --> pyr[c] + sbt6p[c] (B2415 AND B2416 AND B2702 AND B2704 AND B2703) (TRANS-RXN-169) SBTtex D-sorbitol transport via diffusion (extracellular to periplasm) sbt-D[e] <==> sbt-D[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) SDPDS succinyl-diaminopimelate desuccinylase [c] : h2o + sl26da --> 26dap-LL + succ B2472 (SUCCDIAMINOPIMDESUCC-RXN) SDPTA succinyldiaminopimelate transaminase [c] : akg + sl26da <==> glu-L + sl2a6o B3359 (SUCCINYLDIAMINOPIMTRANS-RXN) SELCYSS selenocysteine synthase [c] : selnp + sertrna(sec) --> h + pi + sectrna B3591 SELNPS Selenophosphate synthase [c] : atp + h2o + seln --> amp + pi + selnp B1764 (2.7.9.3-RXN) SERASr (L-seryl)adenylate synthase [c] : atp + h + ser-L <==> ppi + seramp B0586 (ENTF-RXN) ((LEFT REMOVE PROTON)) SERAT serine O-acetyltransferase [c] : accoa + ser-L <==> acser + coa B3607 (SERINE-O-ACETTRAN-RXN) SERD_D D-serine deaminase [c] : ser-D --> nh4 + pyr B2366 (DSERDEAM-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) SERD_L L-serine deaminase [c] : ser-L --> nh4 + pyr (B1814 OR B2797 OR B3708 OR B4471) (4.3.1.17-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) SERt2rpp L-serine reversible transport via proton symport (periplasm) h[p] + ser-L[p] <==> h[c] + ser-L[c] (B2796 OR B3116) (TRANS-RXN-71) SERt4pp L-serine via sodium symport (periplasm) na1[p] + ser-L[p] --> na1[c] + ser-L[c] B3089 (RXN0-4083) SERtex L-serine transport via diffusion (extracellular to periplasm) ser-L[e] <==> ser-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) SERTRS Seryl-tRNA synthetase [c] : atp + ser-L + trnaser --> amp + ppi + sertrna B0893 (SERINE--TRNA-LIGASE-RXN) SERTRS2 Seryl-tRNA synthetase (selenocystein) [c] : atp + ser-L + trnasecys --> amp + ppi + sertrna(sec) B0893 (RXN0-2161) SFGTHi S-Formylglutathione hydralase [c] : Sfglutth + h2o --> for + gthrd + h (B0355 OR B2154) (S-FORMYLGLUTATHIONE-HYDROLASE-RXN) ((RIGHT REMOVE PROTON)) SGDS Succinylglutamate desuccinylase [c] : h2o + sucglu --> glu-L + succ B1744 (SUCCGLUDESUCC-RXN) SGSAD Succinylglutamic semialdehyde dehydrogenase [c] : h2o + nad + sucgsa --> (2) h + nadh + sucglu B1746 (SUCCGLUALDDEHYD-RXN) ((RIGHT REMOVE PROTON)) SHCHCS2 "2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase" [c] : ichor + ssaltpp --> 2shchc + pyr + thmpp B2264 (SHCHCSYNTH-RXN) SHCHD2 sirohydrochlorin dehydrogenase (NAD) [c] : dscl + nad --> h + nadh + scl B3368 (DIMETHUROPORDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) SHCHF sirohydrochlorin ferrochetalase [c] : fe2 + scl --> (3) h + sheme B3368 (SIROHEME-FERROCHELAT-RXN) SHK3Dr shikimate dehydrogenase [c] : 3dhsk + h + nadph <==> nadp + skm (B1692 OR B3281) (SHIKIMATE-5-DEHYDROGENASE-RXN) ((LEFT REMOVE PROTON)) SHKK shikimate kinase [c] : atp + skm --> adp + h + skm5p (B3390 OR B0388) (SHIKIMATE-KINASE-RXN) ((RIGHT REMOVE PROTON)) SHSL1 O-succinylhomoserine lyase (L-cysteine) [c] : cys-L + suchms --> cyst-L + h + succ B3939 (O-SUCCHOMOSERLYASE-RXN) ((RIGHT REMOVE PROTON)) SKMt2pp shikimate transport in via proton symport (periplasm) h[p] + skm[p] --> h[c] + skm[c] B1981 (TRANS-RXN-27) SKMtex shikimate transport via diffusion (extracellular to periplasm) skm[e] <==> skm[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) SO2tex SO2 transport via diffusion (extracellular to periplasm) so2[e] <==> so2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) SO2tpp SO2 transport via diffusion (periplasm) so2[p] <==> so2[c] (:DIFFUSION) (:INNER-MEMBRANE-DIFFUSION) SO3tex sulfite transport via diffusion (extracellular to periplasm) so3[e] <==> so3[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) SO4tex sulfate transport via diffusion (extracellular to periplasm) so4[e] <==> so4[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) SOTA Succinylornithine transaminase [c] : akg + sucorn --> glu-L + sucgsa B1748 (SUCCORNTRANSAM-RXN) SPMDabcpp spermidine transport via ABC system (periplasm) atp[c] + h2o[c] + spmd[p] --> adp[c] + h[c] + pi[c] + spmd[c] ((B1440 AND B1441 AND B1442 AND B1443) OR (B1126 AND B1125 AND B1124 AND B1123)) (ABC-24-RXN) ((RIGHT REMOVE PROTON)) SPMDAT1 Spermidine acetyltransferase [c] : accoa + spmd --> N1aspmd + coa + h B1584 (DIAMACTRANS-RXN) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) SPMDAT2 Spermidine acetyltransferase (N8) [c] : accoa + spmd --> coa + h + n8aspmd B1584 (DIAMACTRANS-RXN) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) SPMDtex spermidine transport via diffusion (extracellular to periplasm) spmd[e] <==> spmd[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) SPMS spermidine synthase [c] : ametam + ptrc --> 5mta + h + spmd B0121 (SPERMIDINESYN-RXN) ((RIGHT REMOVE PROTON)) SPODM superoxide dismutase [c] : (2) h + (2) o2s --> h2o2 + o2 (B3908 OR B1656) (SUPEROX-DISMUT-RXN) SPODMpp superoxide dismutase [p] : (2) h + (2) o2s --> h2o2 + o2 B1646 SSALx succinate-semialdehyde dehydrogenase (NAD) [c] : h2o + nad + sucsal --> (2) h + nadh + succ (SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN) ((RIGHT REMOVE PROTON)) SSALy succinate-semialdehyde dehydrogenase (NADP) [c] : h2o + nadp + sucsal --> (2) h + nadph + succ B2661 (SUCCSEMIALDDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) SUCBZL o-succinylbenzoate-CoA ligase [c] : atp + coa + sucbz --> amp + ppi + sbzcoa B2260 (O-SUCCINYLBENZOATE-COA-LIG-RXN) SUCBZS O-succinylbenzoate-CoA synthase [c] : 2shchc --> h2o + sucbz B2261 (O-SUCCINYLBENZOATE-COA-SYN-RXN) SUCCt2_2pp succinate transport via proton symport (2 H) (periplasm) (2) h[p] + succ[p] --> (2) h[c] + succ[c] B3528 (TRANS-RXN-121) SUCCt2_3pp Succintate transport via proton symport (3 H) (periplasm) (3) h[p] + succ[p] --> (3) h[c] + succ[c] (B4123 OR B4138) (TRANS-RXN-121) SUCCt3pp succinate transport out via proton antiport (periplasm) h[p] + succ[c] --> h[c] + succ[p] SUCCtex succinate transport via diffusion (extracellular to periplasm) succ[e] <==> succ[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) SUCDi succinate dehydrogenase (irreversible) [c] : q8 + succ --> fum + q8h2 (B0721 AND B0722 AND B0723 AND B0724) (|SUCCINATE-DEHYDROGENASE-(UBIQUINONE)-RXN|) (:EXPANDED-RXN-MATCH) SUCFUMtpp succinate:fumarate antiporter (periplasm) fum[p] + succ[c] <==> fum[c] + succ[p] (B4138 OR B4123 OR B0621) (TRANS-RXN-202A) SUCOAS succinyl-CoA synthetase (ADP-forming) [c] : atp + coa + succ <==> adp + pi + succoa (B0728 AND B0729) (SUCCCOASYN-RXN) SUCptspp sucrose transport via PEP:Pyr (periplasm) pep[c] + sucr[p] --> pyr[c] + suc6p[c] (B2417 AND B2429 AND B2415 AND B2416) SUCRtex sucrose transport transport via diffusion (extracellular to periplasm) sucr[e] <==> sucr[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) SULabcpp sulfate transport via ABC system (periplasm) atp[c] + h2o[c] + so4[p] --> adp[c] + h[c] + pi[c] + so4[c] ((B2422 AND B2425 AND B2424 AND B2423) OR (B2422 AND B2424 AND B2423 AND B2413 AND B3917)) (ABC-70-RXN) ((RIGHT REMOVE PROTON)) SULFACabcpp sulfoacetate transport via ABC system (periplasm) atp[c] + h2o[c] + sulfac[p] --> adp[c] + h[c] + pi[c] + sulfac[c] (B0936 AND B0933 AND B0934) SULFACtex sulfoaceate transport via diffusion (extracellular to periplasm) sulfac[e] <==> sulfac[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) SULR sulfite reductase (NADPH2) [c] : (3) h2o + h2s + (3) nadp <==> (5) h + (3) nadph + so3 (B2763 AND B2764) (SULFITE-REDUCT-RXN) ((RIGHT REMOVE PROTON)) T2DECAI trans-2-decenoyl-ACP isomerase [c] : tdec2eACP <==> cdec3eACP B0954 (TRANS-2-DECENOYL-ACP-ISOM-RXN) TAGURr tagaturonate reductase [c] : altrn + nad <==> h + nadh + tagur B1521 (ALTRO-OXIDOREDUCT-RXN) ((RIGHT REMOVE PROTON)) TALA transaldolase [c] : g3p + s7p <==> e4p + f6p (B2464 OR B0008) (TRANSALDOL-RXN) TARTD L(+)-tartrate dehydratase [c] : tartr-L --> h2o + oaa (B3061 AND B3062) (LTARTDEHYDRA-RXN) TARTRt7pp Tartrate/succinate antiporter (periplasm) succ[c] + tartr-L[p] <==> succ[p] + tartr-L[c] B3063 (TRANS-RXN-127) TARTRtex Tartrate transport via diffusion (extracellular to periplasm) tartr-L[e] <==> tartr-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TAUDO Taurine dioxygenase [c] : akg + o2 + taur --> aacald + co2 + h + so3 + succ B0368 (RXN0-299) ((RIGHT REMOVE PROTON)) TAURabcpp taurine transport via ABC system (periplasm) atp[c] + h2o[c] + taur[p] --> adp[c] + h[c] + pi[c] + taur[c] (B0365 AND B0366 AND B0367) (ABC-64-RXN) ((RIGHT REMOVE PROTON)) TAURtex taurine transport via diffusion (extracellular to periplasm) taur[e] <==> taur[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TCYNTtex Thiocyanate transport via diffusion (extracellular to periplasm) tcynt[e] <==> tcynt[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TDECOAI tetradecenoyl-coa cis-trans isomerization [c] : tdecoa --> td2coa B3846 TDP thiamin pyrophosphatase [c] : h2o + thmpp --> h + pi + thmmp B1134 (RXN0-3542) ((RIGHT REMOVE PROTON)) TDPADGAT "dTDP-4-amino-4,6-dideoxy-D-glucose acetyltransferase" [c] : accoa + dtdp4addg --> coa + dtdp4aaddg + h B3790 (TDPFUCACTRANS-RXN) ((RIGHT REMOVE PROTON)) TDPAGTA "dTDP-4-amino-4,6-dideoxy-D-glucose transaminase" [c] : dtdp4d6dg + glu-L --> akg + dtdp4addg B3791 (RFFTRANS-RXN) TDPDRE "dTDP-4-dehydrorhamnose 3,5-epimerase" [c] : dtdp4d6dg --> dtdp4d6dm B2038 (DTDPDEHYDRHAMEPIM-RXN) TDPDRR dTDP-4-dehydrorhamnose reductase [c] : dtdp4d6dm + h + nadph --> dtdprmn + nadp B2040 (DTDPDEHYRHAMREDUCT-RXN) ((LEFT REMOVE PROTON)) TDPGDH "dTDPglucose 4,6-dehydratase" [c] : dtdpglu --> dtdp4d6dg + h2o (B2041 OR B3788) (DTDPGLUCDEHYDRAT-RXN) TDSK Tetraacyldisaccharide 4'kinase [c] : atp + lipidAds --> adp + h + lipidA B0915 (TETRAACYLDISACC4KIN-RXN) ((RIGHT REMOVE PROTON)) TDSR1 thiol:disulfide reductase (DsbC) dsbcox[p] + dsbdrd[c] --> dsbcrd[p] + dsbdox[c] (B2893 AND B4136) (:UNMAPPED-CPDS) TDSR2 thiol:disulfide reductase (DsbG) dsbdrd[c] + dsbgox[p] --> dsbdox[c] + dsbgrd[p] (B4136 AND B0604) (:UNMAPPED-CPDS) TGBPA Tagatose-bisphosphate aldolase [c] : tagdp-D <==> dhap + g3p ((B3132 AND B3137) OR (B2095 AND B2096)) (TAGAALDOL-RXN) THD2pp NAD(P) transhydrogenase (periplasm) (2) h[p] + nadh[c] + nadp[c] --> (2) h[c] + nad[c] + nadph[c] (B1602 AND B1603) (1.6.1.2-RXN PYRNUTRANSHYDROGEN-RXN) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) THDPS tetrahydrodipicolinate succinylase [c] : h2o + succoa + thdp --> coa + sl2a6o B0166 (TETHYDPICSUCC-RXN) THIORDXi hydrogen peroxide reductase (thioredoxin) [c] : h2o2 + trdrd --> (2) h2o + trdox ((B2480 AND B3781) OR (B2480 AND B2582)) (RXN0-267) (:EXPANDED-RXN-MATCH) THMabcpp thiamine transport via ABC system (periplasm) atp[c] + h2o[c] + thm[p] --> adp[c] + h[c] + pi[c] + thm[c] (B0068 AND B0067 AND B0066) (ABC-32-RXN) ((RIGHT REMOVE PROTON)) THMDt2pp thymidine transport in via proton symport (periplasm) h[p] + thymd[p] --> h[c] + thymd[c] (B2393 OR B2964) (TRANS-RXN-108H) THMDt2rpp "thymidine transport in via proton symport, reversible (periplasm)" h[p] + thymd[p] <==> h[c] + thymd[c] B2406 (TRANS-RXN-108H) THMDtex thymidine transport via diffusion (extracellular to periplasm) thymd[e] <==> thymd[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) THMtex Thiamine transport via diffusion (extracellular to periplasm) thm[e] <==> thm[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) THRA2i L-allo-Threonine Aldolase [c] : athr-L --> acald + gly (B2551 OR B0870) (LTAA-RXN) THRabcpp L-threonine transport via ABC system (periplasm) atp[c] + h2o[c] + thr-L[p] --> adp[c] + h[c] + pi[c] + thr-L[c] (B3454 AND B3455 AND B3457 AND B3460 AND B3456) THRAi Threonine aldolase [c] : thr-L --> acald + gly (B2551 OR B0870) (THREONINE-ALDOLASE-RXN) (:METACYC) THRD L-threonine dehydrogenase [c] : nad + thr-L --> 2aobut + h + nadh B3616 (THREODEHYD-RXN) ((RIGHT REMOVE PROTON)) THRD_L L-threonine deaminase [c] : thr-L --> 2obut + nh4 (B3117 OR B1814 OR B2797 OR B3772) (THREDEHYD-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) THRPtex phospho-L-threonine transport via diffusion (extracellular to periplasm) thrp[e] <==> thrp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) THRS threonine synthase [c] : h2o + phom --> pi + thr-L B0004 (THRESYN-RXN) THRt2pp L-threonine efflux transport via proton antiport (periplasm) h[p] + thr-L[c] --> h[c] + thr-L[p] (B0813 OR B3823) (TRANS-RXN-244) THRt2rpp L-threonine reversible transport via proton symport (periplasm) h[p] + thr-L[p] <==> h[c] + thr-L[c] B3116 (TRANS-RXN-72) THRt4pp L-threonine via sodium symport (periplasm) na1[p] + thr-L[p] --> na1[c] + thr-L[c] B3089 THRtex L-threonine transport via diffusion (extracellular to periplasm) thr-L[e] <==> thr-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) THRTRS Threonyl-tRNA synthetase [c] : atp + thr-L + trnathr --> amp + ppi + thrtrna B1719 (THREONINE--TRNA-LIGASE-RXN) THYMt3pp thymine transport out via proton antiport (periplasm) h[p] + thym[c] --> h[c] + thym[p] THYMtex thymine transport via diffusion (extracellular to periplasm) thym[e] <==> thym[p] (B1377 OR B2215 OR B0241 OR B0929) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) THZPSN thiazole phosphate synthesis [c] : atp + cys-L + dxyl5p + tyr-L --> 4hba + 4mpetz + ala-L + amp + co2 + h + h2o + ppi (B2530 AND B3992 AND (B3990 AND B3991) AND B0423 AND B4407) TKT1 transketolase [c] : r5p + xu5p-D <==> g3p + s7p (B2935 OR B2465) (1TRANSKETO-RXN) TKT2 transketolase [c] : e4p + xu5p-D <==> f6p + g3p (B2465 OR B2935) (2TRANSKETO-RXN) TMAOR1 Trimethylamine N-oxide reductase (menaquinol 8) [c] : h + mql8 + tmao --> h2o + mqn8 + tma ((B1587 AND B1588 AND B1589 AND B1590) OR (B0894 AND B0895 AND B0896)) TMAOR1pp Trimethylamine N-oxide reductase (menaquinol 8) (periplasm) h[p] + mql8[c] + tmao[p] --> h2o[p] + mqn8[c] + tma[p] ((B1872 AND B1873) OR (B0996 AND B0997)) TMAOR2 Trimethylamine N-oxide reductase (demethylmenaquinol 8) [c] : 2dmmql8 + h + tmao --> 2dmmq8 + h2o + tma (B0894 AND B0895 AND B0896) TMAOR2pp Trimethylamine N-oxide reductase (demethylmenaquinol 8) (periplasm) 2dmmql8[c] + h[p] + tmao[p] --> 2dmmq8[c] + h2o[p] + tma[p] ((B1872 AND B1873) OR (B0996 AND B0997)) TMAOtex Trimethylamine N-oxide transport via diffusion (extracellular to periplasm) tmao[e] <==> tmao[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TMAtex Trimethylamine transport via diffusion (extracellular to periplasm) tma[e] <==> tma[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TMDK1 thymidine kinase (ATP:thymidine) [c] : atp + thymd --> adp + dtmp + h B1238 (THYKI-RXN) ((RIGHT REMOVE PROTON)) TMDPP thymidine phosphorylase [c] : pi + thymd <==> 2dr1p + thym B4382 (THYM-PHOSPH-RXN) TMDS thymidylate synthase [c] : dump + mlthf --> dhf + dtmp B2827 (THYMIDYLATESYN-RXN) TMK thiamine kinase [c] : atp + thm --> adp + h + thmmp B1106 (THIKIN-RXN) ((RIGHT REMOVE PROTON)) TMPK thiamine-phosphate kinase [c] : atp + thmmp --> adp + thmpp B0417 (THI-P-KIN-RXN) TMPPP thiamine-phosphate diphosphorylase [c] : 2mahmp + 4mpetz + h --> ppi + thmmp B3993 (THI-P-SYN-RXN) ((LEFT REMOVE PROTON)) TPI triose-phosphate isomerase [c] : dhap <==> g3p B3919 (TRIOSEPISOMERIZATION-RXN) TPRDCOAS triphosphoribosyl-dephospho-CoA synthase [c] : atp + dpcoa --> 2tpr3dpcoa + ade B0613 (RXN0-309) TRDR thioredoxin reductase (NADPH) [c] : h + nadph + trdox --> nadp + trdrd ((B3781 AND (B0888 AND B0888)) OR B2582) (THIOREDOXIN-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH) TRE6PH trehalose-6-phosphate hydrolase [c] : h2o + tre6p --> g6p + glc-D B4239 (TRE6PHYDRO-RXN) TRE6PP trehalose-phosphatase [c] : h2o + tre6p --> pi + tre B1897 (TREHALOSEPHOSPHA-RXN) TRE6PS "alpha,alpha-trehalose-phosphate synthase (UDP-forming)" [c] : g6p + udpg --> h + tre6p + udp B1896 TREH "alpha,alpha-trehalase" [c] : h2o + tre --> (2) glc-D B3519 (TREHALA-RXN) TREHpp "alpha,alpha-trehalase (periplasm)" [p] : h2o + tre --> (2) glc-D B1197 TREptspp trehalose transport via PEP:Pyr PTS (periplasm) pep[c] + tre[p] --> pyr[c] + tre6p[c] (B2417 AND B2415 AND B2416 AND B4240) (TRANS-RXN-168) TREtex trehalose transport via diffusion (extracellular to periplasm) tre[e] <==> tre[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) TRPAS2 Tryptophanase (L-tryptophan) [c] : h2o + trp-L <==> indole + nh4 + pyr B3708 (TRYPTOPHAN-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) TRPS1 tryptophan synthase (indoleglycerol phosphate) [c] : 3ig3p + ser-L --> g3p + h2o + trp-L (B1260 AND B1261) (TRYPSYN-RXN) TRPS2 tryptophan synthase (indole) [c] : indole + ser-L --> h2o + trp-L (B1260 AND B1261) (RXN0-2382) TRPS3 tryptophan synthase (indoleglycerol phosphate) [c] : 3ig3p --> g3p + indole (B1260 AND B1261) (RXN0-2381) TRPt2rpp L-tryptophan reversible transport via proton symport (periplasm) h[p] + trp-L[p] <==> h[c] + trp-L[c] (B0112 OR B3161 OR B3709) (TRANS-RXN-76) TRPtex L-tryptophan transport via diffusion (extracellular to periplasm) trp-L[e] <==> trp-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TRPTRS Tryptophanyl-tRNA synthetase [c] : atp + trnatrp + trp-L --> amp + ppi + trptrna B3384 (TRYPTOPHAN--TRNA-LIGASE-RXN) TRSARr tartronate semialdehyde reductase [c] : 2h3oppan + h + nadh <==> glyc-R + nad (B0509 OR B3125) (TSA-REDUCT-RXN) (:EXPANDED-RXN-MATCH) TSULabcpp thiosulfate transport via ABC system (periplasm) atp[c] + h2o[c] + tsul[p] --> adp[c] + h[c] + pi[c] + tsul[c] ((B2422 AND B2425 AND B2424 AND B2423) OR (B2422 AND B2424 AND B2423 AND B3917)) (ABC-7-RXN) ((RIGHT REMOVE PROTON)) TSULtex thiosulfate transport via diffusion (extracellular to periplasm) tsul[e] <==> tsul[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TTDCAtexi Tetradecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) ttdca[e] --> ttdca[p] B2344 (RXN0-1802) (:EXPANDED-RXN-MATCH) TTDCEAtexi Tetradecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) ttdcea[e] --> ttdcea[p] B2344 (:UNMAPPED-CPDS) TUNGSabcpp tungstate transport via ABC system (periplasm) atp[c] + h2o[c] + tungs[p] --> adp[c] + h[c] + pi[c] + tungs[c] (B0763 AND B0764 AND B0765 AND B0760) TUNGStex tungstate transport via diffusion (extracellular to periplasm) tungs[e] <==> tungs[p] (B2215 OR B0929 OR B1377 OR B0241) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TYMtex tyramine transport via diffusion (extracellular to periplasm) tym[e] <==> tym[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) [p] : h2o + o2 + tym --> 4hoxpacd + h2o2 + nh4 B1386 TYRPpp phospho-L-tyrosine phosphatase (periplasmic) [p] : h2o + tyrp --> pi + tyr-L B4055 TYRPtex phopho-L-tyrosine transport via diffusion (extracellular to periplasm) tyrp[e] <==> tyrp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TYRt2rpp L-tyrosine reversible transport via proton symport (periplasm) h[p] + tyr-L[p] <==> h[c] + tyr-L[c] (B1907 OR B0112 OR B0576) (TRANS-RXN-77) TYRTA tyrosine transaminase [c] : akg + tyr-L <==> 34hpp + glu-L (B4054 OR B0928) (TYRAMINOTRANS-RXN) TYRtex L-tyrosine transport via diffusion (extracellular to periplasm) tyr-L[e] <==> tyr-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) TYRTRS tyrosyl-tRNA synthetase [c] : atp + trnatyr + tyr-L --> amp + ppi + tyrtrna B1637 (TYROSINE--TRNA-LIGASE-RXN) U23GAAT UDP-3-O-(3-hydroxymyristoyl)glucosamine acyltransferase [c] : 3hmrsACP + u3hga --> ACP + h + u23ga B0179 (UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN) ((RIGHT REMOVE PROTON)) UAAGDS "UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase" [c] : 26dap-M + atp + uamag --> adp + h + pi + ugmd B0085 (UDP-NACMURALGLDAPLIG-RXN) ((RIGHT REMOVE PROTON)) UACGALPpp UDP-N-acetyl-D-galactosamine pyrophosphohydrolase (periplasm) [p] : h2o + udpacgal --> acgal1p + (2) h + ump B0480 UACGAMPpp UDP-N-acetyl-D-glucosamine pyrophosphohydrolase (periplasm) [p] : h2o + uacgam --> acgam1p + (2) h + ump B0480 UACGAMtex UDP-N-acetyl-D-glucosamine transport via diffusion (extracellular to periplasm) uacgam[e] <==> uacgam[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) UACMAMO UDP-N-acetyl-D-mannosamine oxidoreductase [c] : h2o + (2) nad + uacmam --> (3) h + (2) nadh + uacmamu B3787 (UDPMANNACADEHYDROG-RXN) UAG2E UDP-N-acetylglucosamine 2-epimerase [c] : uacgam <==> uacmam B3786 (UDPGLCNACEPIM-RXN) UAGAAT UDP-N-acetylglucosamine acyltransferase [c] : 3hmrsACP + uacgam <==> ACP + u3aga (B1094 AND B0181) (UDPNACETYLGLUCOSAMACYLTRANS-RXN) UAGCVT UDP-N-acetylglucosamine 1-carboxyvinyltransferase [c] : pep + uacgam --> pi + uaccg B3189 (UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN) UAGDP UDP-N-acetylglucosamine diphosphorylase [c] : acgam1p + h + utp --> ppi + uacgam B3730 (NAG1P-URIDYLTRANS-RXN) ((LEFT REMOVE PROTON)) UAGPT3 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [c] : uacgam + uagmda --> h + uaagmda + udp B0090 (NACGLCTRANS-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) UAMAGS UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [c] : atp + glu-D + uama --> adp + h + pi + uamag B0088 (UDP-NACMURALA-GLU-LIG-RXN) ((RIGHT REMOVE PROTON)) UAMAS UDP-N-acetylmuramoyl-L-alanine synthetase [c] : ala-L + atp + uamr --> adp + h + pi + uama B0091 (UDP-NACMUR-ALA-LIG-RXN) ((RIGHT REMOVE PROTON)) UAPGR UDP-N-acetylenolpyruvoylglucosamine reductase [c] : h + nadph + uaccg --> nadp + uamr B3972 (UDPNACETYLMURAMATEDEHYDROG-RXN) ((LEFT REMOVE PROTON)) UDCPDP undecaprenyl-diphosphatase [c] : h2o + udcpdp --> h + pi + udcpp (B0841 OR B3057 OR B1278) (UNDECAPRENYL-DIPHOSPHATASE-RXN) ((RIGHT REMOVE PROTON)) UDCPDPpp undecaprenyl-diphosphatase (periplasm) [p] : h2o + udcpdp --> h + pi + udcpp (B3057 OR B0841 OR B1278) UDCPDPS Undecaprenyl diphosphate synthase [c] : frdp + (8) ipdp --> (8) ppi + udcpdp B0174 (UPPSYN-RXN) (:EXPANDED-RXN-MATCH) UDCPPtppi undecaprenyl phosphate transport (cytoplasm to periplasm) udcpp[p] --> udcpp[c] UDPACGALtex UDP-N-acetyl-D-galactosamine transport via diffusion (extracellular to periplasm) udpacgal[e] <==> udpacgal[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) UDPG4E UDPglucose 4-epimerase [c] : udpg <==> udpgal B0759 (UDPGLUCEPIM-RXN) UDPGALM UDPgalactopyranose mutase [c] : udpgal --> udpgalfur B2036 (GALPMUT-RXN) UDPGALPpp UDPgalactose pyrophosphohydrolase [p] : h2o + udpgal --> gal1p + (2) h + ump B0480 UDPGALtex UDPgalactose transport via diffusion (extracellular to periplasm) udpgal[e] <==> udpgal[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) UDPGD UDPglucose 6-dehydrogenase [c] : h2o + (2) nad + udpg --> (3) h + (2) nadh + udpglcur B2028 (UGD-RXN) ((RIGHT REMOVE PROTON)) UDPGDC UDP-glucuronate C-4'' decarboxylase [c] : nad + udpglcur --> co2 + nadh + udpLa4o B2255 (RXN0-1861) UDPGLCURtex UDP-D-glucuronate transport via diffusion (extracellular to periplasm) udpglcur[e] <==> udpglcur[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) UDPGPpp UDPglucose pyrophosphohydrolase [p] : h2o + udpg --> g1p + (2) h + ump B0480 UDPGtex UDPglucose transport via diffusion (extracellular to periplasm) udpg[e] <==> udpg[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) UDPKAAT UDP-4''-ketopentose:UDP-4-amino-4-deoxy-L-arabinose aminotransferase [c] : glu-L + udpLa4o <==> akg + udpLa4n B2253 (RXN0-1863) UGLCURPpp UDP-D-glucuronate pyrophosphohydrolase (periplasm) [p] : h2o + udpglcur --> glcur1p + (2) h + ump B0480 UGLT UDPglucose--hexose-1-phosphate uridylyltransferase [c] : gal1p + udpg <==> g1p + udpgal B0758 (GALACTURIDYLYLTRANS-RXN) UGLYCH Ureidoglycolate hydrolase [c] : (2) h + h2o + urdglyc --> co2 + glx + (2) nh4 B0505 (UREIDOGLYCOLATE-HYDROLASE-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) UGMDDS "UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase" [c] : alaala + atp + ugmd --> adp + h + pi + ugmda B0086 (UDP-NACMURALGLDAPAALIG-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) UHGADA UDP-3-O-acetylglucosamine deacetylase [c] : h2o + u3aga --> ac + u3hga B0096 (UDPACYLGLCNACDEACETYL-RXN) ULA4NFT UDP-L-Ara4N formyltransferase [c] : 10fthf + udpLa4n --> h + thf + udpLa4fn B2255 (RXN0-1862) ((RIGHT REMOVE PROTON)) ULA4Ntppi transport (cytoplasm to periplasm) uLa4n[c] --> uLa4n[p] (:UNMAPPED-CPDS) UM3PL UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [c] : LalaDgluMdap + atp + uamr --> adp + h + pi + ugmd B4233 UM4PCP "UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate-D-alanine L,D-carboxypeptidase" [c] : h2o + um4p --> ala-D + ugmd B1192 UM4PL UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate-D-alanine ligase [c] : LalaDgluMdapDala + atp + uamr --> adp + h + pi + um4p B4233 (:UNMAPPED-CPDS) UMPK UMP kinase [c] : atp + ump <==> adp + udp (B0910 OR B0171) (UMPKI-RXN) UMPtex UMP transport via diffusion (extracellular to periplasm) ump[e] <==> ump[p] (B0929 OR B1377 OR B2215 OR B0241) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) UNK3 2-keto-4-methylthiobutyrate transamination [c] : 2kmb + glu-L --> akg + met-L UPLA4FNF undecaprenyl phosphate-L-Ara4FN formylase [c] : h2o + uLa4fn --> for + uLa4n (:UNMAPPED-CPDS) UPLA4FNT undecaprenyl phosphate-L-Ara4FN transferase [c] : udcpp + udpLa4fn --> uLa4fn + udp B2254 UPP3MT uroporphyrinogen methyltransferase [c] : (2) amet + uppg3 --> (2) ahcys + dscl + h (B3803 OR B3368) (UROPORIIIMETHYLTRANSA-RXN) ((RIGHT REMOVE PROTON)) UPP3S uroporphyrinogen-III synthase [c] : hmbil --> h2o + uppg3 B3804 (UROGENIIISYN-RXN) UPPDC1 uroporphyrinogen decarboxylase (uroporphyrinogen III) [c] : (4) h + uppg3 --> (4) co2 + cpppg3 B3997 (UROGENDECARBOX-RXN) ((LEFT REMOVE PROTON)) UPPRT uracil phosphoribosyltransferase [c] : prpp + ura --> ppi + ump B2498 (URACIL-PRIBOSYLTRANS-RXN) URAt2pp uracil transport in via proton symport (periplasm) h[p] + ura[p] --> h[c] + ura[c] B2497 (TRANS-RXN-132) URAt2rpp "uracil transport in via proton symport, reversible (periplasm)" h[p] + ura[p] <==> h[c] + ura[c] B1006 (TRANS-RXN-132) URAtex uracil transport via diffusion (extracellular to periplasm) ura[e] <==> ura[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) URDGLYCD ureidoglycolate dehydrogenase [c] : nad + urdglyc --> h + nadh + oxur B0517 (R165-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) UREAtex Urea transport via diffusion (extracellular to periplasm) urea[e] <==> urea[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) UREAtpp Urea transport via facilitate diffusion (periplasm) urea[p] <==> urea[c] B3927 URIC uricase [c] : (2) h2o + o2 + urate --> alltn + co2 + h2o2 URIDK2r uridylate kinase (dUMP) [c] : atp + dump <==> adp + dudp B0171 (|(DEOXY)NUCLEOSIDE-PHOSPHATE-KINASE-RXN|) (:METACYC :EXPANDED-RXN-MATCH) URIH Uridine hydrolase [c] : h2o + uri --> rib-D + ura (B2162 OR B0651 OR B0030) (URIDINE-NUCLEOSIDASE-RXN) URIK2 uridine kinase (GTP:Uridine) [c] : gtp + uri --> gdp + h + ump B2066 (URKI-RXN) ((RIGHT REMOVE PROTON)) URIt2pp uridine transport in via proton symport (periplasm) h[p] + uri[p] --> h[c] + uri[c] (B2393 OR B2964) (TRANS-RXN-108I) URIt2rpp "uridine transport in via proton symport, reversible (periplasm)" h[p] + uri[p] <==> h[c] + uri[c] B2406 (TRANS-RXN-108I) URItex uridine transport via diffusion (extracellular to periplasm) uri[e] <==> uri[p] B0411 USHD UDP-sugar hydrolase [c] : h2o + u23ga --> (2) h + lipidX + ump B0524 (LIPIDXSYNTHESIS-RXN) ((RIGHT REMOVE PROTON)) VALabcpp L-valine transport via ABC system (periplasm) atp[c] + h2o[c] + val-L[p] --> adp[c] + h[c] + pi[c] + val-L[c] (B3454 AND B3455 AND B3457 AND B3460 AND B3456) (ABC-36-RXN) ((RIGHT REMOVE PROTON)) VALt2rpp L-valine reversible transport via proton symport (periplasm) h[p] + val-L[p] <==> h[c] + val-L[c] B0401 VALTA valine transaminase [c] : akg + val-L <==> 3mob + glu-L B3770 (BRANCHED-CHAINAMINOTRANSFERVAL-RXN) VALtex L-valine transport via diffusion (extracellular to periplasm) val-L[e] <==> val-L[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) VALTRS Valyl-tRNA synthetase [c] : atp + trnaval + val-L --> amp + ppi + valtrna B4258 (VALINE--TRNA-LIGASE-RXN) VPAMT Valine-pyruvate aminotransferase [c] : 3mob + ala-L --> pyr + val-L B3572 (VALINE-PYRUVATE-AMINOTRANSFER-RXN) X5PL3E L-xylulose 5-phosphate 3-epimerase [c] : xu5p-L --> ru5p-L B4197 (LXULRU5P-RXN) XAND xanthine dehydrogenase [c] : h2o + nad + xan --> h + nadh + urate (B2866 AND B2867 AND B2868) (RXN0-901) XANt2pp xanthine transport in via proton symport (periplasm) h[p] + xan[p] --> h[c] + xan[c] B3654 XANtex xanthine transport via diffusion (extracellular to periplasm) xan[e] <==> xan[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) XANtpp xanthine reversible transport (periplasm) xan[p] <==> xan[c] XMPtex XMP transport via diffusion (extracellular to periplasm) xmp[e] <==> xmp[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) XPPT xanthine phosphoribosyltransferase [c] : prpp + xan --> ppi + xmp B0238 (XANPRIBOSYLTRAN-RXN) XTSNH Xanthosine hydrolase [c] : h2o + xtsn --> rib-D + xan B0030 (RXN0-363) XTSNt2rpp Xanthosine transport via proton symport (periplasm) h[p] + xtsn[p] <==> h[c] + xtsn[c] B2406 (TRANS-RXN-31) XTSNtex xanthosine transport via diffusion (extracellular to periplasm) xtsn[e] <==> xtsn[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) XYLabcpp D-xylose transport via ABC system (periplasm) atp[c] + h2o[c] + xyl-D[p] --> adp[c] + h[c] + pi[c] + xyl-D[c] (B3566 AND B3567 AND B3568) (ABC-33-RXN) ((RIGHT REMOVE PROTON)) XYLI1 xylose isomerase [c] : xyl-D <==> xylu-D B3565 (XYLISOM-RXN) XYLI2 xylose isomerase [c] : glc-D <==> fru B3565 (GLUCISOM-RXN) (:METACYC) XYLK xylulokinase [c] : atp + xylu-D --> adp + h + xu5p-D (B3564 OR B0063) (XYLULOKIN-RXN) ((RIGHT REMOVE PROTON)) XYLK2 L-xylulokinase [c] : atp + xylu-L --> adp + h + xu5p-L (B0063 OR B3580) (LYXK-RXN) ((RIGHT REMOVE PROTON)) XYLt2pp D-xylose transport in via proton symport (periplasm) h[p] + xyl-D[p] --> h[c] + xyl-D[c] B4031 (TRANS-RXN-30) XYLtex D-xylose transport via diffusion (extracellular to periplasm) xyl-D[e] <==> xyl-D[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) XYLUt2pp L-xylulose transport in via proton symport (periplasm) h[p] + xylu-L[p] --> h[c] + xylu-L[c] (B3577 AND B3578 AND B3579) XYLUtex L-xylulose transport via diffusion (extracellular to periplasm) xylu-L[e] <==> xylu-L[p] (B0241 OR B0929 OR B1377 OR B2215) (RXN0-1683) (:EXPANDED-RXN-MATCH) ZN2abcpp Zinc (Zn+2) ABC transporter (periplasm) atp[c] + h2o[c] + zn2[c] --> adp[c] + h[c] + pi[c] + zn2[p] B3469 (3.6.3.5-RXN) (:METACYC (RIGHT REMOVE PROTON)) ZN2t3pp zinc (Zn+2) transport out via proton antiport (periplasm) h[p] + zn2[c] --> h[c] + zn2[p] (B0752 OR B3915) (TRANS-RXN-200) Zn2tex zinc (Zn+2) transport via diffusion (extracellular to periplasm) zn2[e] <==> zn2[p] (B0241 OR B0929 OR B1377 OR B2215) (:DIFFUSION) (:OUTER-MEMBRANE-DIFFUSION) ZN2tpp zinc transport in via permease (no H+) zn2[p] --> zn2[c] B3040 ZNabcpp zinc (Zn+2) transport via ABC system (periplasm) atp[c] + h2o[c] + zn2[p] --> adp[c] + h[c] + pi[c] + zn2[c] (B1857 AND B1859 AND B1858) (ABC-63-RXN) ((RIGHT REMOVE PROTON)) R_BiomassEcoli R_BiomassEcoli (0.050000) 5mthf[c] + (0.000050) accoa[c] + (0.488000) ala-L[c] + (0.001000) amp[c] + (0.281000) arg-L[c] + (0.229000) asn-L[c] + (0.229000) asp-L[c] + (45.731800) atp[c] + (0.000129) clpn-EC[c] + (0.000006) coa[c] + (0.126000) ctp[c] + (0.087000) cys-L[c] + (0.024700) datp[c] + (0.025400) dctp[c] + (0.025400) dgtp[c] + (0.024700) dttp[c] + (0.000010) fad[c] + (0.250000) gln-L[c] + (0.250000) glu-L[c] + (0.582000) gly[c] + (0.154000) glycogen[c] + (0.203000) gtp[c] + (45.560800) h2o[c] + (0.090000) his-L[c] + (0.276000) ile-L[c] + (0.428000) leu-L[c] + (0.008400) lps-EC[c] + (0.326000) lys-L[c] + (0.146000) met-L[c] + (0.002150) nad[c] + (0.000050) nadh[c] + (0.000130) nadp[c] + (0.000400) nadph[c] + (0.001935) pe-EC[c] + (0.027600) peptido-EC[c] + (0.000464) pg-EC[c] + (0.176000) phe-L[c] + (0.210000) pro-L[c] + (0.000052) ps-EC[c] + (0.035000) ptrc[c] + (0.205000) ser-L[c] + (0.007000) spmd[c] + (0.000003) succoa[c] + (0.241000) thr-L[c] + (0.054000) trp-L[c] + (0.131000) tyr-L[c] + (0.003000) udpg[c] + (0.136000) utp[c] + (0.402000) val-L[c] --> (45.560800) adp[c] + (45.560350) h[c] + (45.562800) pi[c] + (0.730200) ppi[c]