abbreviation officialName equation geneAssociation ecocyc-rxn-ids analysis notes 12DGR120tipp "1,2 diacylglycerol transport via flipping ( periplasm to cytoplasm, n-C12:0 )" 12dgr120[p] --> 12dgr120[c] 12DGR140tipp "1,2 diacylglycerol transport via flipping ( periplasm to cytoplasm, n-C14:0 )" 12dgr140[p] --> 12dgr140[c] 12DGR141tipp "1,2 diacylglycerol transport via flipping ( periplasm to cytoplasm, n-C14:1 )" 12dgr141[p] --> 12dgr141[c] 12DGR160tipp "1,2 diacylglycerol transport via flipping ( periplasm to cytoplasm, n-C16:0 )" 12dgr160[p] --> 12dgr160[c] 12DGR161tipp "1,2 diacylglycerol transport via flipping ( periplasm to cytoplasm, n-C16:1 )" 12dgr161[p] --> 12dgr161[c] 12DGR180tipp "1,2 diacylglycerol transport via flipping ( periplasm to cytoplasm, n-C18:0 )" 12dgr180[p] --> 12dgr180[c] 12DGR181tipp "1,2 diacylglycerol transport via flipping ( periplasm to cytoplasm, n-C18:1 )" 12dgr181[p] --> 12dgr181[c] 12PPDStpp "( S )-Propane-1,2-diol facilitated transport ( periplasm )" 12ppd-S[p] <==> 12ppd-S[c] 23DAPPAt2pp "2,3-diaminopropionate transport in via proton symport" 23dappa[p] + h[p] --> 23dappa[c] + h[c] ACGAL1PPpp N-acetyl-D-galactosamine 1-phosphatase ( periplasm ) [p] : acgal1p + h2o --> acgal + pi ACGAM1PPpp N-acetyl-D-glucosamine 1-phosphatase ( periplasm ) [p] : acgam1p + h2o --> acgam + pi ACM6PH N-acetylmuramate 6-phosphate hydrolase [c] : acmum6p + h2o --> acgam6p + lac-D ACOLIPAtex arabinose modified core oligosaccharide lipid A transport via vector ( periplasm to extracellular ) acolipa[p] --> acolipa[e] ALDD4 "aldehyde dehydrogenase ( butanal, NAD )" [c] : btal + h2o + nad --> but + ( 2 ) h + nadh ARBTNtex aerobactin secretion ( to extracellular ) arbtn[p] + h[p] --> arbtn[e] + h[c] ARBTNtpp aerobactin secretion ( to periplasm ) arbtn[c] + h[p] --> arbtn[p] + h[c] ASNabcpp L-asparagine transport via ABC system ( periplasm ) asn-L[p] + atp[c] + h2o[c] --> adp[c] + asn-L[c] + h[c] + pi[c] CLIPAtex cold lipid A transport via vector ( periplasm to extracellular ) lipa_cold[p] --> lipa_cold[e] CLPNH120pp "cardiolipin hydrolase ( periplasm, n-C12:0 )" [p] : clpn120 + h2o --> h + pa120 + pg120 CLPNH140pp "cardiolipin hydrolase ( periplasm, n-C14:0 )" [p] : clpn140 + h2o --> h + pa140 + pg140 CLPNH141pp "cardiolipin hydrolase ( periplasm, n-C14:1 )" [p] : clpn141 + h2o --> h + pa141 + pg141 CLPNH160pp "cardiolipin hydrolase ( periplasm, n-C16:0 )" [p] : clpn160 + h2o --> h + pa160 + pg160 CLPNH161pp "cardiolipin hydrolase ( periplasm, n-C16:1 )" [p] : clpn161 + h2o --> h + pa161 + pg161 CLPNH180pp "cardiolipin hydrolase ( periplasm, n-C18:0 )" [p] : clpn180 + h2o --> h + pa180 + pg180 CLPNH181pp "cardiolipin hydrolase ( periplasm, n-C18:1 )" [p] : clpn181 + h2o --> h + pa181 + pg181 CMPN CMP nucleosidase [c] : cmp + h2o --> csn + r5p COLIPAtex core oligosaccharide lipid A transport via vector ( periplasm to extracellular ) colipa[p] --> colipa[e] CYSabcpp L-cysteine uptake via ABC system ( periplasm ) atp[c] + cys-L[p] + h2o[c] --> adp[c] + cys-L[c] + h[c] + pi[c] CYSDabcpp D-cysteine uptake via ABC system ( periplasm ) atp[c] + cys-D[p] + h2o[c] --> adp[c] + cys-D[c] + h[c] + pi[c] DAPabcpp M-diaminopimelic acid ABC transport ( periplasm ) 26dap-M[p] + atp[c] + h2o[c] --> 26dap-M[c] + adp[c] + h[c] + pi[c] DATPHs dATP spontanous amine hydrolysis [c] : datp + h + h2o --> ditp + nh4 DHAtpp Dihydroxyacetone transport via facilitated diffusion ( periplasm ) dha[p] <==> dha[c] DHBSH "2,3-dihydroxybenzoylserine hydrolase" [c] : 23dhbzs + h2o --> 23dhb + ser-L DKMPPD "2,3-diketo-5-methylthio-1-phosphopentane degradation reaction" [c] : dkmpp + h2o + o2 --> 2kmb + for + ( 2 ) h + pi DKMPPD3 "2,3-diketo-5-methylthio-1-phosphopentane degradation reaction" [c] : dkmpp + ( 3 ) h2o + ( 2 ) nad --> 2kmb + for + ( 4 ) h + ( 2 ) nadh + pi ENLIPAtex phosphoethanolamine lipid A transport via vector ( periplasm to extracellular ) enlipa[p] --> enlipa[e] ETHAt2pp ethanolamine transport in via proton symport etha[p] + h[p] --> etha[c] + h[c] ETOHt2rpp ethanol reversible transport via proton symport ( periplasm ) etoh[p] + h[p] <==> etoh[c] + h[c] FE3abcpp iron ( III ) transport via ABC system ( periplasm to cytoplasm ) atp[c] + fe3[p] + h2o[c] --> adp[c] + fe3[c] + h[c] + pi[c] FE3DHBZR "release of Fe( III ) from ferric 2,3-dihydroxybenzoylserine" [c] : fe3dhbzs --> 23dhbzs + fe3 FEENTERexs enterobactin Fe( III ) binding ( spontaneous ) [e] : enter + fe3 --> feenter FEENTERR1 Fe-enterobactin reduction ( Fe( III )-unloading ) [c] : fadh2 + ( 2 ) feenter --> ( 2 ) enter + fad + ( 2 ) fe2 + ( 2 ) h FEENTERR2 Fe-enterobactin reduction ( Fe( III )-unloading ) [c] : ( 2 ) feenter + fmnh2 --> ( 2 ) enter + ( 2 ) fe2 + fmn + ( 2 ) h FEENTERR3 Fe-enterobactin reduction ( Fe( III )-unloading ) [c] : ( 2 ) feenter + rbflvrd --> ( 2 ) enter + ( 2 ) fe2 + ( 2 ) h + ribflv FEENTERtex enterochelin transport ( secretion periplasm ) enter[p] + h[p] --> enter[e] + h[c] GTPHs spontaneous GTP amine hydrolysis [c] : gtp + h + h2o --> nh4 + xtp GUAtpp Guanine transport via diffusion ( periplasm ) gua[p] <==> gua[c] GUR1PPpp Glucuronate 1-phosphate phosphatase ( periplasm ) [p] : glcur1p + h2o --> glcur + pi H2SO Hydrogen sulfide oxidation [c] : h2s + ( 2 ) o2 --> ( 2 ) h + so4 HYPOE hypothetical enyme [c] : h2o + pyam5p --> pi + pydam HYXNtpp Hypoxanthine transport ( periplasm ) hxan[p] <==> hxan[c] K2L4Atex KDO( 2 )-lipid IV A transport via vector ( periplasm to extracellular ) kdo2lipid4[p] --> kdo2lipid4[e] METOX1s methionine spontaneous oxidation [c] : h2o2 + met-L --> h2o + metsox-S-L METSOX1abcpp L-methionine S-oxide transport via ABC system ( periplasm ) atp[c] + h2o[c] + metsox-S-L[p] --> adp[c] + h[c] + metsox-S-L[c] + pi[c] MINOHPtexi myo-inositol phosphate transport via diffusion ( extracellular to periplasm ) minohp[e] --> minohp[p] NACtpp Nicotinic acid uptake ( periplasm ) nac[p] --> nac[c] NMNt7pp NMN transport via NMN glycohydrolase ( periplasm ) h2o[c] + nmn[p] --> h[c] + ncam[c] + r5p[c] OMMBLHX3 "2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase ( anaerobic )" [c] : 2ommbl + ( 2 ) atp + ( 3 ) h2o + nad --> 2omhmbl + ( 2 ) adp + ( 3 ) h + nadh + ( 2 ) pi OMPHHX3 2-octaprenyl-6-methoxyphenol hydroxylase ( anaerobic ) [c] : 2omph + ( 2 ) atp + ( 3 ) h2o + nad --> 2ombzl + ( 2 ) adp + ( 3 ) h + nadh + ( 2 ) pi OPHHX3 2-Octaprenylphenol hydroxylase ( anaerobic ) [c] : 2oph + ( 2 ) atp + ( 3 ) h2o + nad --> 2ohph + ( 2 ) adp + ( 3 ) h + nadh + ( 2 ) pi PACALDt2rpp phenylacetaldehyde reversible transport via proton symport ( periplasm ) h[p] + pacald[p] <==> h[c] + pacald[c] PDX5PO2 pyridoxine 5'-phosphate oxidase ( anaerboic [c] : nad + pdx5p --> h + nadh + pydx5p PDXPP Pyridoxine 5-phosphate phosphatase [c] : h2o + pdx5p --> pi + pydxn PHEMEtiex protoheme transport irreversible out via diffusion ( periplasm to extracellular ) pheme[p] --> pheme[e] PPALtpp propanal transport via channel ( periplasm ) ppal[c] <==> ppal[p] PYRt2rpp pyruvate reversible transport via proton symport ( periplasm ) h[p] + pyr[p] <==> h[c] + pyr[c] SUCCt3pp succinate transport out via proton antiport ( periplasm ) h[p] + succ[c] --> h[c] + succ[p] THYMt3pp thymine transport out via proton antiport ( periplasm ) h[p] + thym[c] --> h[c] + thym[p] UDCPPtppi undecaprenyl phosphate transport ( cytoplasm to periplasm ) udcpp[p] --> udcpp[c] UNK3 2-keto-4-methylthiobutyrate transamination [c] : 2kmb + glu-L --> akg + met-L URIC uricase [c] : ( 2 ) h2o + o2 + urate --> alltn + co2 + h2o2 XANtpp xanthine reversible transport ( periplasm ) xan[p] <==> xan[c]