abbreviation officialName equation geneAssociation ecocyc-rxn analysis ecocyc-equation unmatched-ecocyc-cpds unmatched-ucsd-cpds score 2AGPE120tipp 2-Acyl-sn-glycero-3-phosphoethanolamine ( n-C12:0 ) transporter via facilitated diffusion ( periplasm ) 2agpe120[p] --> 2agpe120[c] B2835 XN0-1684 :gene-match ferric dicitrate[extracellular space] =ferric dicitrate[periplasmic space] fe3dcit h, adocbl 0 ALATA_D2 D-alanine transaminase [c] : ala-D + pydx5p --> pyam5p + pyr ( B2551 OR B0870 ) LTAA-RXN :gene-match L-allo-threonine = glycine + acetaldehyde gly, athr-L, acald pydx5p, ala-D, pyam5p, pyr 0 ALATA_L2 alanine transaminase [c] : ala-L + pydx5p --> pyam5p + pyr ( B2551 OR B0870 ) LTAA-RXN :gene-match L-allo-threonine = glycine + acetaldehyde gly, athr-L, acald pydx5p, ala-L, pyam5p, pyr 0 CBItonex Cobinamide transport via ton system ( extermal ) cbi[e] + h[p] --> cbi[p] + h[c] ( B3966 AND ( B1252 AND B3005 AND B3006 ) ) RXN0-1684 :gene-match ferric dicitrate[extracellular space] =ferric dicitrate[periplasmic space] fe3dcit h, cbi 0 CFAS160E "cyclopropane fatty acid synthase ( Phosphatidylethanolamine, n-C16:0 )" [c] : ( 2 ) amet + pe161 --> ( 2 ) ahcys + cpe160 + ( 2 ) h B1661 2.1.1.79-RXN :gene-match a phospholipid olefinic fatty acid + S-adenosyl-L-methionine = a phospholipid cyclopropane fatty acid + S-adenosyl-L-homocysteine cpg180, Phospholipid-Olefinic-Fatty-Acids pe161, h, cpe160 2 CFAS160G "cyclopropane fatty acid synthase ( Phosphatidylglycerol, n-C16:0 )" [c] : ( 2 ) amet + pg161 --> ( 2 ) ahcys + cpg160 + ( 2 ) h B1661 2.1.1.79-RXN :gene-match a phospholipid olefinic fatty acid + S-adenosyl-L-methionine = a phospholipid cyclopropane fatty acid + S-adenosyl-L-homocysteine cpg180, Phospholipid-Olefinic-Fatty-Acids h, pg161, cpg160 2 CFAS180E "cyclopropane fatty acid synthase ( Phosphatidylethanolamine, n-C18:0 )" [c] : ( 2 ) amet + pe181 --> ( 2 ) ahcys + cpe180 + ( 2 ) h B1661 2.1.1.79-RXN :gene-match a phospholipid olefinic fatty acid + S-adenosyl-L-methionine = a phospholipid cyclopropane fatty acid + S-adenosyl-L-homocysteine cpg180, Phospholipid-Olefinic-Fatty-Acids h, pe181, cpe180 2 ENTERES2 Enterochelin Esterase ( Fe containing ) [c] : feenter + ( 3 ) h2o --> ( 3 ) 23dhbzs + fe3 + ( 3 ) h B0585 RXN0-1661 :gene-match enterobactin + 3 H2O -> 3 2,3-dihydroxybenzoylserine enter feenter, h, fe3 2 F6Pt6_2pp Fructose-6-phosphate transport via phosphate antiport ( periplasm ) f6p[p] + ( 2 ) pi[c] --> f6p[c] + ( 2 ) pi[p] B3666 TRANS-RXN-33 :gene-match H+[periplasmic space] + beta-D-glucose-6-phosphate[periplasmic space] =beta-D-glucose-6-phosphate[cytosol] + H+[cytosol] h, g6p pi, f6p 0 FE3Ri Fe( III ) reduction [c] : fadh2 + ( 2 ) fe3 --> fad + ( 2 ) fe2 + ( 2 ) h B3844 FMNREDUCT-RXN :gene-match FMN + NAD(P)H + H+ = FMNH2 + NAD(P)+ NAD(P), fmn, fmnh2, NAD(P)H fadh2, fe2, fe3, fad 1 FLVR( NAD ) flavin reductase ( NAD ) [c] : h + nadh + ribflv --> nad + rbflvrd B3844 FMNREDUCT-RXN :gene-match FMN + NAD(P)H + H+ = FMNH2 + NAD(P)+ NAD(P), fmn, fmnh2, NAD(P)H nadh, rbflvrd, nad, ribflv 1 GAM6Pt6_2pp D-Glucosamine 6-phosphate transport via phosphate antiport ( periplasm ) gam6p[p] + ( 2 ) pi[c] --> gam6p[c] + ( 2 ) pi[p] B3666 TRANS-RXN-33 :gene-match H+[periplasmic space] + beta-D-glucose-6-phosphate[periplasmic space] =beta-D-glucose-6-phosphate[cytosol] + H+[cytosol] h, g6p gam6p, pi 0 GLCDpp Glucose dehydrogenase ( ubiquinone-8 as acceptor ) ( periplasm ) glc-D[p] + h2o[p] + q8[c] --> glcn[p] + h[p] + q8h2[c] B0124 GLUCDEHYDROG-RXN :gene-match beta-D-glucose + a ubiquinone = glucono-delta-lactone + a ubiquinol Ubiquinones, GLC, GLC-D-LACTONE, Ubiquinols q8, glcn, q8h2, h2o, h, glc-D 0 GLYALDtpp Glyceraldehyde facilitated diffusion ( periplasm ) glyald[p] <==> glyald[c] B3927 TRANS-RXN-131 :gene-match glycerol[periplasmic space] =glycerol[cytosol] glyc glyald 0 LPLIPAL2ATE120 "Lysophospholipase L2 ( acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C12:0 )" [c] : 2agpe120 + pg120 --> apg120 + g3pe B3825 LYSOPHOSPHOLIPASE-RXN :gene-match a 2-acyl-sn-glycero-3-phosphocholine + H2O = a carboxylate + L-1-glycero-3-phosphocholine g3pc, h2o, 2-Acylglycero-Phosphocholines, Carboxylates 2agpe120, g3pe, pg120, apg120 0 LPLIPAL2ATE140 "Lysophospholipase L2 ( acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:0 )" [c] : 2agpe140 + pg140 --> apg140 + g3pe B3825 LYSOPHOSPHOLIPASE-RXN :gene-match a 2-acyl-sn-glycero-3-phosphocholine + H2O = a carboxylate + L-1-glycero-3-phosphocholine g3pc, h2o, 2-Acylglycero-Phosphocholines, Carboxylates 2agpe140, apg140, pg140, g3pe 0 LPLIPAL2ATE141 "Lysophospholipase L2 ( acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:1 )" [c] : 2agpe141 + pg141 --> apg141 + g3pe B3825 LYSOPHOSPHOLIPASE-RXN :gene-match a 2-acyl-sn-glycero-3-phosphocholine + H2O = a carboxylate + L-1-glycero-3-phosphocholine g3pc, h2o, 2-Acylglycero-Phosphocholines, Carboxylates apg141, 2agpe141, pg141, g3pe 0 LPLIPAL2ATE160 "Lysophospholipase L2 ( acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:0 )" [c] : 2agpe160 + pg160 --> apg160 + g3pe B3825 LYSOPHOSPHOLIPASE-RXN :gene-match a 2-acyl-sn-glycero-3-phosphocholine + H2O = a carboxylate + L-1-glycero-3-phosphocholine g3pc, h2o, 2-Acylglycero-Phosphocholines, Carboxylates pg160, 2agpe160, apg160, g3pe 0 LPLIPAL2ATE161 "Lysophospholipase L2 ( acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:1 )" [c] : 2agpe161 + pg161 --> apg161 + g3pe B3825 LYSOPHOSPHOLIPASE-RXN :gene-match a 2-acyl-sn-glycero-3-phosphocholine + H2O = a carboxylate + L-1-glycero-3-phosphocholine g3pc, h2o, 2-Acylglycero-Phosphocholines, Carboxylates pg161, 2agpe161, apg161, g3pe 0 LPLIPAL2ATE180 "Lysophospholipase L2 ( acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:0 )" [c] : 2agpe180 + pg180 --> apg180 + g3pe B3825 LYSOPHOSPHOLIPASE-RXN :gene-match a 2-acyl-sn-glycero-3-phosphocholine + H2O = a carboxylate + L-1-glycero-3-phosphocholine g3pc, h2o, 2-Acylglycero-Phosphocholines, Carboxylates pg180, 2agpe180, apg180, g3pe 0 LPLIPAL2ATE181 "Lysophospholipase L2 ( acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:1 )" [c] : 2agpe181 + pg181 --> apg181 + g3pe B3825 LYSOPHOSPHOLIPASE-RXN :gene-match a 2-acyl-sn-glycero-3-phosphocholine + H2O = a carboxylate + L-1-glycero-3-phosphocholine g3pc, h2o, 2-Acylglycero-Phosphocholines, Carboxylates pg181, apg181, 2agpe181, g3pe 0 LPLIPAL2ATG160 "Lysophospholipase L2 ( acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:0 )" [c] : 2agpg160 + pg160 --> apg160 + g3pg B3825 LYSOPHOSPHOLIPASE-RXN :gene-match a 2-acyl-sn-glycero-3-phosphocholine + H2O = a carboxylate + L-1-glycero-3-phosphocholine g3pc, h2o, 2-Acylglycero-Phosphocholines, Carboxylates pg160, 2agpg160, g3pg, apg160 0 LPLIPAL2ATG161 "Lysophospholipase L2 ( acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:1 )" [c] : 2agpg161 + pg161 --> apg161 + g3pg B3825 LYSOPHOSPHOLIPASE-RXN :gene-match a 2-acyl-sn-glycero-3-phosphocholine + H2O = a carboxylate + L-1-glycero-3-phosphocholine g3pc, h2o, 2-Acylglycero-Phosphocholines, Carboxylates g3pg, apg161, pg161, 2agpg161 0 MALDt2_2pp D-Malate transport via proton symport ( 2 H ) ( periplasm ) ( 2 ) h[p] + mal-D[p] --> ( 2 ) h[c] + mal-D[c] B3528 TRANS-RXN-121 :gene-match Na+[periplasmic space] + succinate[periplasmic space] =Na+[cytosol] + succinate[cytosol] succ, na1 h, mal-D 0 MALTHXtexi maltohexaose transport via diffusion ( extracellular to periplasm ) irreversible malthx[e] --> malthx[p] B4036 RXN0-1741 :gene-match maltose[extracellular space] =maltose[periplasmic space] malt malthx 0 MALTPTtexi maltopentaoseMaltotriose transport via diffusion ( extracellular to periplasm ) irreversible maltpt[e] --> maltpt[p] B4036 RXN0-1741 :gene-match maltose[extracellular space] =maltose[periplasmic space] malt maltpt 0 MAN6Pt6_2pp Mannose-6-phosphate transport via phosphate antiport ( periplasm ) man6p[p] + ( 2 ) pi[c] --> man6p[c] + ( 2 ) pi[p] B3666 TRANS-RXN-33 :gene-match H+[periplasmic space] + beta-D-glucose-6-phosphate[periplasmic space] =beta-D-glucose-6-phosphate[cytosol] + H+[cytosol] h, g6p man6p, pi 0 ODECOAI Octadecenoyl-coa cis-trans isomerization [c] : odecoa --> od2coa B3846 ENOYL-COA-DELTA-ISOM-RXN :gene-match a cis-3-enoyl-CoA = a trans-2-enoyl-CoA CIS-DELTA3-ENOYL-COA, td2coa od2coa, odecoa 0 QMO2 quinol monooxygenase ( Ubiquinol-8 ) [c] : ( 2 ) o2 + q8h2 --> ( 2 ) h + ( 2 ) o2s + q8 B3029 RXN0-3441 :gene-match menadiol + 2 O2 -> menadione + 2 O2- CPD-3766, MENADIOL h, q8h2, q8 2 QMO3 quinol monooxygenase ( menaquinol 8 ) [c] : mql8 + ( 2 ) o2 --> ( 2 ) h + mqn8 + ( 2 ) o2s B3029 RXN0-3441 :gene-match menadiol + 2 O2 -> menadione + 2 O2- CPD-3766, MENADIOL mqn8, h, mql8 2 UREAtpp Urea transport via facilitate diffusion ( periplasm ) urea[p] <==> urea[c] B3927 TRANS-RXN-131 :gene-match glycerol[periplasmic space] =glycerol[cytosol] glyc urea 0