abbreviation officialName equation ecocyc-rxn-ids analysis Zn2tex zinc (Zn+2) transport via diffusion (extracellular to periplasm) zn2[e] <==> zn2[p] (:EXCHANGE) ZNt3pp zinc (Zn+2) transport out via proton antiport (periplasm) h[p] + zn2[c] --> h[c] + zn2[p] (TRANS-RXN-200) ZNabcpp zinc (Zn+2) transport via ABC system (periplasm) atp[c] + h2o[c] + zn2[p] --> adp[c] + h[c] + pi[c] + zn2[c] (ABC-63-RXN) ((RIGHT REMOVE PROTON)) ZN2tpp zinc transport in/out via permease (no H+) zn2[p] <==> zn2[c] (:EXCHANGE) ZN2abcpp Zinc (Zn+2) ABC transporter (periplasm) atp[c] + h2o[c] + zn2[c] --> adp[c] + h[c] + pi[c] + zn2[p] (3.6.3.5-RXN) (:METACYC (RIGHT REMOVE PROTON)) XYLtex D-xylose transport via diffusion (extracellular to periplasm) xyl-D[e] <==> xyl-D[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) XYLt2pp D-xylose transport in via proton symport (periplasm) h[p] + xyl-D[p] --> h[c] + xyl-D[c] (TRANS-RXN-30) XYLabcpp D-xylose transport via ABC system (periplasm) atp[c] + h2o[c] + xyl-D[p] --> adp[c] + h[c] + pi[c] + xyl-D[c] (ABC-33-RXN) ((RIGHT REMOVE PROTON)) XYLUtex L-xylulose transport via diffusion (extracellular to periplasm) xylu-L[e] <==> xylu-L[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) XYLUt2pp L-xylulose transport in via proton symport (periplasm) h[p] + xylu-L[p] --> h[c] + xylu-L[c] XYLK2 L-xylulokinase [c] : atp + xylu-L --> adp + h + xu5p-L (LYXK-RXN) ((RIGHT REMOVE PROTON)) XYLK xylulokinase [c] : atp + xylu-D --> adp + h + xu5p-D (XYLULOKIN-RXN) ((RIGHT REMOVE PROTON)) XYLI2 xylose isomerase [c] : glc-D <==> fru (GLUCISOM-RXN) (:METACYC) XYLI1 xylose isomerase [c] : xyl-D <==> xylu-D (XYLISOM-RXN) XTSNtex xanthosine transport via diffusion (extracellular to periplasm) xtsn[e] <==> xtsn[p] (:EXCHANGE) XTSNt2rpp Xanthosine transport via proton symport (periplasm) h[p] + xtsn[p] <==> h[c] + xtsn[c] (TRANS-RXN-31) XTSNH Xanthosine hydrolase [c] : h2o + xtsn --> rib-D + xan (RXN0-363) XPPT xanthine phosphoribosyltransferase [c] : prpp + xan --> ppi + xmp (XANPRIBOSYLTRAN-RXN) XMPtex XMP transport via diffusion (extracellular to periplasm) xmp[e] <==> xmp[p] (:EXCHANGE) XANtpp xanthine reversible transport (periplasm) xan[p] <==> xan[c] (:EXCHANGE) XANtex xanthine transport via diffusion (extracellular to periplasm) xan[e] <==> xan[p] (:EXCHANGE) XANt2pp xanthine transport in via proton symport (periplasm) h[p] + xan[p] --> h[c] + xan[c] XAND xanthine dehydrogenase [c] : h2o + nad + xan --> h + nadh + urate (RXN0-901) X5PL3E L-xylulose 5-phosphate 3-epimerase [c] : xu5p-L --> ru5p-L (LXULRU5P-RXN) VPAMT Valine-pyruvate aminotransferase [c] : 3mob + ala-L --> pyr + val-L (VALINE-PYRUVATE-AMINOTRANSFER-RXN) VALtex L-valine transport via diffusion (extracellular to periplasm) val-L[e] <==> val-L[p] (:EXCHANGE) VALt2rpp L-valine reversible transport via proton symport (periplasm) h[p] + val-L[p] <==> h[c] + val-L[c] VALabcpp L-valine transport via ABC system (periplasm) atp[c] + h2o[c] + val-L[p] --> adp[c] + h[c] + pi[c] + val-L[c] (ABC-36-RXN) ((RIGHT REMOVE PROTON)) VALTRS Valyl-tRNA synthetase [c] : atp + trnaval + val-L --> amp + ppi + valtrna (VALINE--TRNA-LIGASE-RXN) VALTA valine transaminase [c] : akg + val-L <==> 3mob + glu-L (BRANCHED-CHAINAMINOTRANSFERVAL-RXN) USHD UDP-sugar hydrolase [c] : h2o + u23ga --> (2) h + lipidX + ump (LIPIDXSYNTHESIS-RXN) ((RIGHT REMOVE PROTON)) URItex uridine transport via diffusion (extracellular to periplasm) uri[e] <==> uri[p] (:EXCHANGE) URIt2rpp uridine transport in via proton symport, reversible (periplasm) h[p] + uri[p] <==> h[c] + uri[c] (TRANS-RXN-108I) URIt2pp uridine transport in via proton symport (periplasm) h[p] + uri[p] --> h[c] + uri[c] (TRANS-RXN-108I) URIK2 uridine kinase (GTP:Uridine) [c] : gtp + uri --> gdp + h + ump (URKI-RXN) ((RIGHT REMOVE PROTON)) URIH Uridine hydrolase [c] : h2o + uri --> rib-D + ura (URIDINE-NUCLEOSIDASE-RXN) URIDK2r uridylate kinase (dUMP) [c] : atp + dump <==> adp + dudp (|(DEOXY)NUCLEOSIDE-PHOSPHATE-KINASE-RXN|) (:METACYC :EXPANDED-RXN-MATCH) URIC uricase [c] : (2) h2o + o2 + urate --> alltn + co2 + h2o2 UREAtpp Urea transport via facilitate diffusion (periplasm) urea[p] <==> urea[c] (:EXCHANGE) UREAtex Urea transport via diffusion (extracellular to periplasm) urea[e] <==> urea[p] (:EXCHANGE) URDGLYCD ureidoglycolate dehydrogenase [c] : nad + urdglyc --> h + nadh + oxur (R165-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) URAtex uracil transport via diffusion (extracellular to periplasm) ura[e] <==> ura[p] (:EXCHANGE) URAt2rpp uracil transport in via proton symport, reversible (periplasm) h[p] + ura[p] <==> h[c] + ura[c] (TRANS-RXN-132) URAt2pp uracil transport in via proton symport (periplasm) h[p] + ura[p] --> h[c] + ura[c] (TRANS-RXN-132) UPPRT uracil phosphoribosyltransferase [c] : prpp + ura --> ppi + ump (URACIL-PRIBOSYLTRANS-RXN) UPPDC1 uroporphyrinogen decarboxylase (uroporphyrinogen III) [c] : (4) h + uppg3 --> (4) co2 + cpppg3 (UROGENDECARBOX-RXN) ((LEFT REMOVE PROTON)) UPP3S uroporphyrinogen-III synthase [c] : hmbil --> h2o + uppg3 (UROGENIIISYN-RXN) UPP3MT uroporphyrinogen methyltransferase [c] : (2) amet + uppg3 --> (2) ahcys + dscl + h (UROPORIIIMETHYLTRANSA-RXN) ((RIGHT REMOVE PROTON)) UPLA4FNT undecaprenyl phosphate-L-Ara4FN transferase [c] : udcpp + udpLa4fn --> uLa4fn + udp UPLA4FNF undecaprenyl phosphate-L-Ara4FN formylase [c] : h2o + uLa4fn --> for + uLa4n (:UNMAPPED-CPDS) UNK3 2-keto-4-methylthiobutyrate transamination [c] : 2kmb + glu-L --> akg + met-L UMPtex UMP transport via diffusion (extracellular to periplasm) ump[e] <==> ump[p] (:EXCHANGE) UMPK UMP kinase [c] : atp + ump <==> adp + udp (UMPKI-RXN) UM4PL UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate-D-alanine ligase [c] : LalaDgluMdapDala + uamr --> h2o + um4p (:UNMAPPED-CPDS) UM4PCP UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate-D-alanine L,D-carboxypeptidase [c] : h2o + um4p --> ala-D + ugmd UM3PL UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelat e ligase [c] : LalaDgluMdap + uamr --> h2o + ugmd ULA4Ntppi transport (cytoplasm to periplasm) uLa4n[c] --> uLa4n[p] (:UNMAPPED-CPDS) ULA4NFT UDP-L-Ara4N formyltransferase [c] : 10fthf + udpLa4n --> h + thf + udpLa4fn (RXN0-1862) ((RIGHT REMOVE PROTON)) UHGADA UDP-3-O-acetylglucosamine deacetylase [c] : h2o + u3aga --> ac + u3hga (UDPACYLGLCNACDEACETYL-RXN) UGMDDS UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase [c] : alaala + atp + ugmd --> adp + h + pi + ugmda (UDP-NACMURALGLDAPAALIG-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) UGLYCH Ureidoglycolate hydrolase [c] : (2) h + h2o + urdglyc --> co2 + glx + (2) nh4 (UREIDOGLYCOLATE-HYDROLASE-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) UGLT UDPglucose--hexose-1-phosphate uridylyltransferase [c] : gal1p + udpg <==> g1p + udpgal (GALACTURIDYLYLTRANS-RXN) UGLCURPpp UDP-D-glucuronate pyrophosphohydrolase (periplasm) [p] : h2o + udpglcur --> glcur1p + (2) h + ump UDPKAAT UDP-4''-ketopentose:UDP-4-amino-4-deoxy-L-arabinose aminotransferase [c] : glu-L + udpLa4o <==> akg + udpLa4n (RXN0-1863) UDPGtex UDPglucose transport via diffusion (extracellular to periplasm) udpg[e] <==> udpg[p] (:EXCHANGE) UDPGPpp UDPglucose pyrophosphohydrolase [p] : h2o + udpg --> g1p + (2) h + ump UDPGLCURtex UDP-D-glucuronate transport via diffusion (extracellular to periplasm) udpglcur[e] <==> udpglcur[p] (:EXCHANGE) UDPGDC UDP-glucuronate C-4'' decarboxylase [c] : nad + udpglcur --> co2 + nadh + udpLa4o (RXN0-1861) UDPGD UDPglucose 6-dehydrogenase [c] : h2o + (2) nad + udpg --> (3) h + (2) nadh + udpglcur (UGD-RXN) ((RIGHT REMOVE PROTON)) UDPGALtex UDPgalactose transport via diffusion (extracellular to periplasm) udpgal[e] <==> udpgal[p] (:EXCHANGE) UDPGALPpp UDPgalactose pyrophosphohydrolase [p] : h2o + udpgal --> gal1p + (2) h + ump UDPGALM UDPgalactopyranose mutase [c] : udpgal --> udpgalfur (GALPMUT-RXN) UDPG4E UDPglucose 4-epimerase [c] : udpg <==> udpgal (UDPGLUCEPIM-RXN) UDPACGALtex UDP-N-acetyl-D-galactosamine transport via diffusion (extracellular to periplasm) udpacgal[e] <==> udpacgal[p] (:EXCHANGE) UDCPPtppi undecaprenyl phosphate transport (cytoplasm to periplasm) udcpp[p] --> udcpp[c] (:EXCHANGE) UDCPDPpp undecaprenyl-diphosphatase (periplasm) [p] : h2o + udcpdp --> h + pi + udcpp UDCPDPS Undecaprenyl diphosphate synthase [c] : frdp + (8) ipdp --> (8) ppi + udcpdp UDCPDP undecaprenyl-diphosphatase [c] : h2o + udcpdp --> h + pi + udcpp (UNDECAPRENYL-DIPHOSPHATASE-RXN) ((RIGHT REMOVE PROTON)) UAPGR UDP-N-acetylenolpyruvoylglucosamine reductase [c] : h + nadph + uaccg --> nadp + uamr (UDPNACETYLMURAMATEDEHYDROG-RXN) ((LEFT REMOVE PROTON)) UAMAS UDP-N-acetylmuramoyl-L-alanine synthetase [c] : ala-L + atp + uamr --> adp + h + pi + uama (UDP-NACMUR-ALA-LIG-RXN) ((RIGHT REMOVE PROTON)) UAMAGS UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [c] : atp + glu-D + uama --> adp + h + pi + uamag (UDP-NACMURALA-GLU-LIG-RXN) ((RIGHT REMOVE PROTON)) UAGPT3 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [c] : uacgam + uagmda --> h + uaagmda + udp (NACGLCTRANS-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) UAGDP UDP-N-acetylglucosamine diphosphorylase [c] : acgam1p + h + utp --> ppi + uacgam (NAG1P-URIDYLTRANS-RXN) ((LEFT REMOVE PROTON)) UAGCVT UDP-N-acetylglucosamine 1-carboxyvinyltransferase [c] : pep + uacgam --> pi + uaccg (UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN) UAGAAT UDP-N-acetylglucosamine acyltransferase [c] : 3hmrsACP + uacgam <==> ACP + u3aga (UDPNACETYLGLUCOSAMACYLTRANS-RXN) UAG2E UDP-N-acetylglucosamine 2-epimerase [c] : uacgam <==> uacmam (UDPGLCNACEPIM-RXN) UACMAMO UDP-N-acetyl-D-mannosamine oxidoreductase [c] : h2o + (2) nad + uacmam --> (3) h + (2) nadh + uacmamu (UDPMANNACADEHYDROG-RXN) UACGAMtex UDP-N-acetyl-D-glucosamine transport via diffusion (extracellular to periplasm) uacgam[e] <==> uacgam[p] (:EXCHANGE) UACGAMPpp UDP-N-acetyl-D-glucosamine pyrophosphohydrolase (periplasm) [p] : h2o + uacgam --> acgam1p + (2) h + ump UACGALPpp UDP-N-acetyl-D-galactosamine pyrophosphohydrolase (periplasm) [p] : h2o + udpacgal --> acgal1p + (2) h + ump UAAGDS UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase [c] : 26dap-M + atp + uamag --> adp + h + pi + ugmd (UDP-NACMURALGLDAPLIG-RXN) ((RIGHT REMOVE PROTON)) U23GAAT UDP-3-O-(3-hydroxymyristoyl)glucosamine acyltransferase [c] : 3hmrsACP + u3hga --> ACP + h + u23ga (UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN) ((RIGHT REMOVE PROTON)) TYRtex L-tyrosine transport via diffusion (extracellular to periplasm) tyr-L[e] <==> tyr-L[p] (:EXCHANGE) TYRt2rpp L-tyrosine reversible transport via proton symport (periplasm) h[p] + tyr-L[p] <==> h[c] + tyr-L[c] (TRANS-RXN-77) TYRTRS tyrosyl-tRNA synthetase [c] : atp + trnatyr + tyr-L --> amp + ppi + tyrtrna (TYROSINE--TRNA-LIGASE-RXN) TYRTA tyrosine transaminase [c] : akg + tyr-L <==> 34hpp + glu-L (TYRAMINOTRANS-RXN) TYRPtex phopho-L-tyrosine transport via diffusion (extracellular to periplasm) tyrp[e] <==> tyrp[p] (:EXCHANGE) TYRPpp phospho-L-tyrosine phosphatase (periplasmic) [p] : h2o + tyrp --> pi + tyr-L TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) [p] : h2o + o2 + tym --> 4hoxpacd + h2o2 + nh4 TYMtex tyramine transport via diffusion (extracellular to periplasm) tym[e] <==> tym[p] (:EXCHANGE) TUNGStex tungstate transport via diffusion (extracellular to periplasm) tungs[p] <==> tungs[c] (:EXCHANGE) TUNGSabcpp tungstate transport via ABC system (periplasm) atp[c] + h2o[c] + tungs[p] --> adp[c] + h[c] + pi[c] + tungs[c] TTDCEAtexi Tetradecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) ttdcea[e] --> ttdcea[p] (:UNMAPPED-CPDS) TTDCAtexi Tetradecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) ttdca[e] --> ttdca[p] (:UNMAPPED-CPDS) TSULtex thiosulfate transport via diffusion (extracellular to periplasm) tsul[e] <==> tsul[p] (:EXCHANGE) TSULabcpp thiosulfate transport via ABC system (periplasm) atp[c] + h2o[c] + tsul[p] --> adp[c] + h[c] + pi[c] + tsul[c] (ABC-7-RXN) ((RIGHT REMOVE PROTON)) TRSARr tartronate semialdehyde reductase [c] : 2h3oppan + h + nadh <==> glyc-R + nad (TSA-REDUCT-RXN) (:EXPANDED-RXN-MATCH) TRPtex L-tryptophan transport via diffusion (extracellular to periplasm) trp-L[e] <==> trp-L[p] (:EXCHANGE) TRPt2rpp L-tryptophan reversible transport via proton symport (periplasm) h[p] + trp-L[p] <==> h[c] + trp-L[c] (TRANS-RXN-76) TRPTRS Tryptophanyl-tRNA synthetase [c] : atp + trnatrp + trp-L --> amp + ppi + trptrna (TRYPTOPHAN--TRNA-LIGASE-RXN) TRPS3 tryptophan synthase (indoleglycerol phosphate) [c] : 3ig3p --> g3p + indole (RXN0-2381) TRPS2 tryptophan synthase (indole) [c] : indole + ser-L --> h2o + trp-L (RXN0-2382) TRPS1 tryptophan synthase (indoleglycerol phosphate) [c] : 3ig3p + ser-L --> g3p + h2o + trp-L (TRYPSYN-RXN) TRPAS2 Tryptophanase (L-tryptophan) [c] : h2o + trp-L <==> indole + nh4 + pyr (TRYPTOPHAN-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) TREtex trehalose transport via diffusion (extracellular to periplasm) tre[e] <==> tre[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) TREptspp trehalose transport via PEP:Pyr PTS (periplasm) pep[c] + tre[p] --> pyr[c] + tre6p[c] (TRANS-RXN-168) TREHpp alpha,alpha-trehalase (periplasm) [p] : h2o + tre --> (2) glc-D TREH alpha,alpha-trehalase [c] : h2o + tre --> (2) glc-D (TREHALA-RXN) TRE6PS alpha,alpha-trehalose-phosphate synthase (UDP-forming) [c] : g6p + udpg --> h + tre6p + udp TRE6PP trehalose-phosphatase [c] : h2o + tre6p --> pi + tre (TREHALOSEPHOSPHA-RXN) TRE6PH trehalose-6-phosphate hydrolase [c] : h2o + tre6p --> g6p + glc-D (TRE6PHYDRO-RXN) TRDR thioredoxin reductase (NADPH) [c] : h + nadph + trdox --> nadp + trdrd (THIOREDOXIN-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH) TPRDCOAS triphosphoribosyl-dephospho-CoA synthase [c] : atp + dpcoa --> 2tpr3dpcoa + ade (RXN0-309) TPI triose-phosphate isomerase [c] : dhap <==> g3p (TRIOSEPISOMERIZATION-RXN) TMPPP thiamine-phosphate diphosphorylase [c] : 2mahmp + 4mpetz + h --> ppi + thmmp (THI-P-SYN-RXN) ((LEFT REMOVE PROTON)) TMPK thiamine-phosphate kinase [c] : atp + thmmp --> adp + thmpp (THI-P-KIN-RXN) TMK thiamine kinase [c] : atp + thm --> adp + h + thmmp (THIKIN-RXN) ((RIGHT REMOVE PROTON)) TMDS thymidylate synthase [c] : dump + mlthf --> dhf + dtmp (THYMIDYLATESYN-RXN) TMDPP thymidine phosphorylase [c] : pi + thymd <==> 2dr1p + thym (THYM-PHOSPH-RXN) TMDK1 thymidine kinase (ATP:thymidine) [c] : atp + thymd --> adp + dtmp + h (THYKI-RXN) ((RIGHT REMOVE PROTON)) TMAtex Trimethylamine transport via diffusion (extracellular to periplasm) tma[e] <==> tma[p] (:EXCHANGE) TMAOtex Trimethylamine N-oxide transport via diffusion (extracellular to periplasm) tmao[e] <==> tmao[p] (:EXCHANGE) TMAOR2pp Trimethylamine N-oxide reductase (demethylmenaquinol 8) (periplasm) 2dmmql8[c] + h[p] + tmao[p] --> 2dmmq8[c] + h2o[p] + tma[p] TMAOR2 Trimethylamine N-oxide reductase (demethylmenaquinol 8) [c] : 2dmmql8 + h + tmao --> 2dmmq8 + h2o + tma TMAOR1pp Trimethylamine N-oxide reductase (menaquinol 8) (periplasm) h[p] + mql8[c] + tmao[p] --> h2o[p] + mqn8[c] + tma[p] TMAOR1 Trimethylamine N-oxide reductase (menaquinol 8) [c] : h + mql8 + tmao --> h2o + mqn8 + tma TKT2 transketolase [c] : e4p + xu5p-D <==> f6p + g3p (2TRANSKETO-RXN) TKT1 transketolase [c] : r5p + xu5p-D <==> g3p + s7p (1TRANSKETO-RXN) THZPSN thiazole phosphate synthesis [c] : atp + cys-L + dxyl5p + tyr-L --> 4hba + 4mpetz + ala-L + amp + co2 + h + h2o + ppi THRtex L-threonine transport via diffusion (extracellular to periplasm) thr-L[e] <==> thr-L[p] (:EXCHANGE) THRt4pp L-threonine via sodium symport (periplasm) na1[p] + thr-L[p] --> na1[c] + thr-L[c] THRt2rpp L-threonine reversible transport via proton symport (periplasm) h[p] + thr-L[p] <==> h[c] + thr-L[c] (TRANS-RXN-72) THRt2pp L-threonine efflux transport via proton antiport (periplasm) h[p] + thr-L[c] --> h[c] + thr-L[p] (TRANS-RXN-244) THRabcpp L-threonine transport via ABC system (periplasm) atp[c] + h2o[c] + thr-L[p] --> adp[c] + h[c] + pi[c] + thr-L[c] THRTRS Threonyl-tRNA synthetase [c] : atp + thr-L + trnathr --> amp + ppi + thrtrna (THREONINE--TRNA-LIGASE-RXN) THRS threonine synthase [c] : h2o + phom --> pi + thr-L (THRESYN-RXN) THRPtex phospho-L-threonine transport via diffusion (extracellular to periplasm) thrp[e] <==> thrp[p] (:EXCHANGE) THRD_L L-threonine deaminase [c] : thr-L --> 2obut + nh4 (THREDEHYD-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) THRD L-threonine dehydrogenase [c] : nad + thr-L --> 2aobut + h + nadh (THREODEHYD-RXN) ((RIGHT REMOVE PROTON)) THRAi Threonine aldolase [c] : thr-L --> acald + gly (THREONINE-ALDOLASE-RXN) (:METACYC) THRA2i L-allo-Threonine Aldolase [c] : athr-L --> acald + gly (LTAA-RXN) THMtex Thiamine transport via diffusion (extracellular to periplasm) thm[e] <==> thm[p] (:EXCHANGE) THMabcpp thiamine transport via ABC system (periplasm) atp[c] + h2o[c] + thm[p] --> adp[c] + h[c] + pi[c] + thm[c] (ABC-32-RXN) ((RIGHT REMOVE PROTON)) THMDtex thymidine transport via diffusion (extracellular to periplasm) thymd[e] <==> thymd[p] (:EXCHANGE) THMDt2rpp thymidine transport in via proton symport, reversible (periplasm) h[p] + thymd[p] <==> h[c] + thymd[c] (TRANS-RXN-108H) THMDt2pp thymidine transport in via proton symport (periplasm) h[p] + thymd[p] --> h[c] + thymd[c] (TRANS-RXN-108H) THIORDXi hydrogen peroxide reductase (thioredoxin) [c] : h2o2 + trdrd --> (2) h2o + trdox (RXN0-267) (:EXPANDED-RXN-MATCH) THDPS tetrahydrodipicolinate succinylase [c] : h2o + succoa + thdp --> coa + sl2a6o (TETHYDPICSUCC-RXN) THD2pp NAD(P) transhydrogenase (periplasm) (2) h[p] + nadh[c] + nadp[c] --> (2) h[c] + nad[c] + nadph[c] (1.6.1.2-RXN PYRNUTRANSHYDROGEN-RXN) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) TGBPA Tagatose-bisphosphate aldolase [c] : tagdp-D <==> dhap + g3p (TAGAALDOL-RXN) TDSR2 thiol:disulfide reductase (DsbG) dsbdrd[c] + dsbgox[p] --> dsbdox[c] + dsbgrd[p] (:UNMAPPED-CPDS) TDSR1 thiol:disulfide reductase (DsbC) dsbcox[p] + dsbdrd[c] --> dsbcrd[p] + dsbdox[c] (:UNMAPPED-CPDS) TDSK Tetraacyldisaccharide 4'kinase [c] : atp + lipidAds --> adp + h + lipidA (TETRAACYLDISACC4KIN-RXN) ((RIGHT REMOVE PROTON)) TDPGDH dTDPglucose 4,6-dehydratase [c] : dtdpglu --> dtdp4d6dg + h2o (DTDPGLUCDEHYDRAT-RXN) TDPDRR dTDP-4-dehydrorhamnose reductase [c] : dtdp4d6dm + h + nadph --> dtdprmn + nadp (DTDPDEHYRHAMREDUCT-RXN) ((LEFT REMOVE PROTON)) TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase [c] : dtdp4d6dg --> dtdp4d6dm (DTDPDEHYDRHAMEPIM-RXN) TDPAGTA dTDP-4-amino-4,6-dideoxy-D-glucose transaminase [c] : dtdp4d6dg + glu-L --> akg + dtdp4addg (2.6.1.33-RXN) (:METACYC) TDPADGAT dTDP-4-amino-4,6-dideoxy-D-glucose acetyltransferase [c] : accoa + dtdp4addg --> coa + dtdp4aaddg + h TDECOAI tetradecenoyl-coa cis-trans isomerization [c] : tdecoa --> td2coa TCYNTtex Thiocyanate transport via diffusion (extracellular to periplasm) tcynt[e] <==> tcynt[p] (:EXCHANGE) TAURtex taurine transport via diffusion (extracellular to periplasm) taur[e] <==> taur[p] (:EXCHANGE) TAURabcpp taurine transport via ABC system (periplasm) atp[c] + h2o[c] + taur[p] --> adp[c] + h[c] + pi[c] + taur[c] (ABC-64-RXN) ((RIGHT REMOVE PROTON)) TAUDO Taurine dioxygenase [c] : akg + o2 + taur --> aacald + co2 + h + so3 + succ (RXN0-299) ((RIGHT REMOVE PROTON)) TARTRtex Tartrate transport via diffusion (extracellular to periplasm) tartr-L[e] <==> tartr-L[p] (:EXCHANGE) TARTRt7pp Tartrate/succinate antiporter (periplasm) succ[c] + tartr-L[p] <==> succ[p] + tartr-L[c] (TRANS-RXN-127) TARTD L(+)-tartrate dehydratase [c] : tartr-L --> h2o + oaa (LTARTDEHYDRA-RXN) TALA transaldolase [c] : g3p + s7p <==> e4p + f6p (TRANSALDOL-RXN) TAGURr tagaturonate reductase [c] : altrn + nad <==> h + nadh + tagur (ALTRO-OXIDOREDUCT-RXN) ((RIGHT REMOVE PROTON)) T2DECAI trans-2-decenoyl-ACP isomerase [c] : tdec2eACP <==> cdec3eACP (TRANS-2-DECENOYL-ACP-ISOM-RXN) SULabcpp sulfate transport via ABC system (periplasm) atp[c] + h2o[c] + so4[p] --> adp[c] + h[c] + pi[c] + so4[c] (ABC-70-RXN) ((RIGHT REMOVE PROTON)) SULR sulfite reductase (NADPH2) [c] : (3) h2o + h2s + (3) nadp <==> (5) h + (3) nadph + so3 (SULFITE-REDUCT-RXN) ((RIGHT REMOVE PROTON)) SULFACtex sulfoaceate transport via diffusion (extracellular to periplasm) sulfac[e] <==> sulfac[p] (:EXCHANGE) SULFACabcpp sulfoacetate transport via ABC system (periplasm) atp[c] + h2o[c] + sulfac[p] --> adp[c] + h[c] + pi[c] + sulfac[c] SUCptspp sucrose transport via PEP:Pyr (periplasm) pep[c] + sucr[p] --> pyr[c] + suc6p[c] SUCRtex sucrose transport transport via diffusion (extracellular to periplasm) sucr[e] <==> sucr[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) SUCOAS succinyl-CoA synthetase (ADP-forming) [c] : atp + coa + succ <==> adp + pi + succoa (SUCCCOASYN-RXN) SUCFUMtpp succinate:fumarate antiporter (periplasm) fum[p] + succ[c] <==> fum[c] + succ[p] (TRANS-RXN-202A) SUCDi succinate dehydrogenase (irreversible) [c] : q8 + succ --> fum + q8h2 (|SUCCINATE-DEHYDROGENASE-(UBIQUINONE)-RXN|) (:EXPANDED-RXN-MATCH) SUCCtex succinate transport via diffusion (extracellular to periplasm) succ[e] <==> succ[p] (:EXCHANGE) SUCCt2bpp Succinate efflux via proton symport (periplasm) h[c] + succ[c] --> h[p] + succ[p] SUCCt2_3pp Succintate transport via proton symport (3 H) (periplasm) (3) h[p] + succ[p] --> (3) h[c] + succ[c] SUCCt2_2pp succinate transport via proton symport (2 H) (periplasm) (2) h[p] + succ[p] --> (2) h[c] + succ[c] SUCBZS O-succinylbenzoate-CoA synthase [c] : 2shchc --> h2o + sucbz (O-SUCCINYLBENZOATE-COA-SYN-RXN) SUCBZL o-succinylbenzoate-CoA ligase [c] : atp + coa + sucbz --> amp + ppi + sbzcoa (O-SUCCINYLBENZOATE-COA-LIG-RXN) SSALy succinate-semialdehyde dehydrogenase (NADP) [c] : h2o + nadp + sucsal --> (2) h + nadph + succ (SUCCSEMIALDDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) SSALx succinate-semialdehyde dehydrogenase (NAD) [c] : h2o + nad + sucsal --> (2) h + nadh + succ (SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN) ((RIGHT REMOVE PROTON)) SPODMpp superoxide dismutase [p] : (2) h + (2) o2s --> h2o2 + o2 SPODM superoxide dismutase [c] : (2) h + (2) o2s --> h2o2 + o2 (SUPEROX-DISMUT-RXN) SPMS spermidine synthase [c] : ametam + ptrc --> 5mta + h + spmd (SPERMIDINESYN-RXN) ((RIGHT REMOVE PROTON)) SPMDtex spermidine transport via diffusion (extracellular to periplasm) spmd[e] <==> spmd[p] (:EXCHANGE) SPMDabcpp spermidine transport via ABC system (periplasm) atp[c] + h2o[c] + spmd[p] --> adp[c] + h[c] + pi[c] + spmd[c] (ABC-24-RXN) ((RIGHT REMOVE PROTON)) SPMDAT2 Spermidine acetyltransferase (N8) [c] : accoa + spmd --> coa + h + n8aspmd (DIAMACTRANS-RXN) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) SPMDAT1 Spermidine acetyltransferase [c] : accoa + spmd --> N1aspmd + coa + h (DIAMACTRANS-RXN) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) SOTA Succinylornithine transaminase [c] : akg + sucorn --> glu-L + sucgsa (SUCCORNTRANSAM-RXN) SO4tex sulfate transport via diffusion (extracellular to periplasm) so4[e] <==> so4[p] (:EXCHANGE) SO3tex sulfite transport via diffusion (extracellular to periplasm) so3[e] <==> so3[p] (:EXCHANGE) SO2tpp SO2 transport via diffusion (periplasm) so2[p] <==> so2[c] (:EXCHANGE) SO2tex SO2 transport via diffusion (extracellular to periplasm) so2[e] <==> so2[p] (:EXCHANGE) SKMtex shikimate transport via diffusion (extracellular to periplasm) skm[e] <==> skm[p] (:EXCHANGE) SKMt2pp shikimate transport in via proton symport (periplasm) h[p] + skm[p] --> h[c] + skm[c] (TRANS-RXN-27) SHSL1 O-succinylhomoserine lyase (L-cysteine) [c] : cys-L + suchms --> cyst-L + h + succ (O-SUCCHOMOSERLYASE-RXN) ((RIGHT REMOVE PROTON)) SHKK shikimate kinase [c] : atp + skm --> adp + h + skm5p (SHIKIMATE-KINASE-RXN) ((RIGHT REMOVE PROTON)) SHK3Dr shikimate dehydrogenase [c] : 3dhsk + h + nadph <==> nadp + skm (SHIKIMATE-5-DEHYDROGENASE-RXN) ((LEFT REMOVE PROTON)) SHCHF sirohydrochlorin ferrochetalase [c] : fe2 + scl --> (3) h + sheme (SIROHEME-FERROCHELAT-RXN) SHCHD2 sirohydrochlorin dehydrogenase (NAD) [c] : dscl + nad --> h + nadh + scl (DIMETHUROPORDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) SHCHCS2 2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase [c] : ichor + ssaltpp --> 2shchc + pyr + thmpp (SHCHCSYNTH-RXN) SGSAD Succinylglutamic semialdehyde dehydrogenase [c] : h2o + nad + sucgsa --> (2) h + nadh + sucglu (SUCCGLUALDDEHYD-RXN) ((RIGHT REMOVE PROTON)) SGDS Succinylglutamate desuccinylase [c] : h2o + sucglu --> glu-L + succ (SUCCGLUDESUCC-RXN) SFGTHi S-Formylglutathione hydralase [c] : Sfglutth + h2o --> for + gthrd + h (S-FORMYLGLUTATHIONE-HYDROLASE-RXN) ((RIGHT REMOVE PROTON)) SERtex L-serine transport via diffusion (extracellular to periplasm) ser-L[e] <==> ser-L[p] (:EXCHANGE) SERt4pp L-serine via sodium symport (periplasm) na1[p] + ser-L[p] --> na1[c] + ser-L[c] (RXN0-4083) SERt2rpp L-serine reversible transport via proton symport (periplasm) h[p] + ser-L[p] <==> h[c] + ser-L[c] (TRANS-RXN-71) SERTRS2 Seryl-tRNA synthetase (selenocystein) [c] : atp + ser-L + trnasecys --> amp + ppi + sertrna(sec) (RXN0-2161) SERTRS Seryl-tRNA synthetase [c] : atp + ser-L + trnaser --> amp + ppi + sertrna (SERINE--TRNA-LIGASE-RXN) SERD_L L-serine deaminase [c] : ser-L --> nh4 + pyr (4.3.1.17-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) SERD_D D-serine deaminase [c] : ser-D --> nh4 + pyr (DSERDEAM-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) SERAT serine O-acetyltransferase [c] : accoa + ser-L <==> acser + coa (SERINE-O-ACETTRAN-RXN) SERASr (L-seryl)adenylate synthase [c] : atp + h + ser-L <==> ppi + seramp (ENTF-RXN) ((LEFT REMOVE PROTON)) SELNPS Selenophosphate synthase [c] : atp + h2o + seln --> amp + pi + selnp (2.7.9.3-RXN) SELCYSS selenocysteine synthase [c] : selnp + sertrna(sec) --> h + pi + sectrna SDPTA succinyldiaminopimelate transaminase [c] : akg + sl26da <==> glu-L + sl2a6o (SUCCINYLDIAMINOPIMTRANS-RXN) SDPDS succinyl-diaminopimelate desuccinylase [c] : h2o + sl26da --> 26dap-LL + succ (SUCCDIAMINOPIMDESUCC-RXN) SBTtex D-sorbitol transport via diffusion (extracellular to periplasm) sbt-D[e] <==> sbt-D[p] (:EXCHANGE) SBTptspp D-sorbitol transport via PEP:Pyr PTS (periplasm) pep[c] + sbt-D[p] --> pyr[c] + sbt6p[c] (TRANS-RXN-169) SBTPD sorbitol-6-phosphate dehydrogenase [c] : nad + sbt6p <==> f6p + h + nadh (SORB6PDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) SARCOX sarcosine oxidase [c] : h2o + o2 + sarcs --> fald + gly + h2o2 (SARCOX-RXN) (:METACYC) SADT2 Sulfate adenyltransferase [c] : atp + gtp + h2o + so4 --> aps + gdp + pi + ppi SADH Succinylarginine dihydrolase [c] : (2) h + (2) h2o + sucarg --> co2 + (2) nh4 + sucorn (SUCCARGDIHYDRO-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) S7PI sedoheptulose 7-phosphate isomerase [c] : s7p --> gmhep7p (RXN0-4301) RZ5PP alpha-ribazole 5-phosphate phosphatase [c] : 5prdmbz + h2o --> pi + rdmbzi (RIBAZOLEPHOSPHAT-RXN) RPI ribose-5-phosphate isomerase [c] : r5p <==> ru5p-D (RIB5PISOM-RXN) RPE ribulose 5-phosphate 3-epimerase [c] : ru5p-D <==> xu5p-D (RIBULP3EPIM-RXN) RNTR4c ribonucleoside-triphosphate reductase (UTP) (flavodoxin) [c] : fldrd + utp --> dutp + fldox + h2o (RXN0-724) RNTR3c ribonucleoside-triphosphate reductase (CTP) (flavodoxin) [c] : ctp + fldrd --> dctp + fldox + h2o (RXN0-723) RNTR2c ribonucleoside-triphosphate reductase (GTP) (flavodoxin) [c] : fldrd + gtp --> dgtp + fldox + h2o (RXN0-746) RNTR1c ribonucleoside-triphosphate reductase (ATP) (flavodoxin) [c] : atp + fldrd --> datp + fldox + h2o (RXN0-745) RNDR4b ribonucleoside-diphosphate reductase (UDP) (glutaredoxin) [c] : grxrd + udp --> dudp + grxox + h2o (RXN0-722) (:EXPANDED-RXN-MATCH) RNDR4 ribonucleoside-diphosphate reductase (UDP) [c] : trdrd + udp --> dudp + h2o + trdox (RIBONUCLEOSIDE-DIP-REDUCTI-RXN UDPREDUCT-RXN) (:EXPANDED-RXN-MATCH) RNDR3b ribonucleoside-diphosphate reductase (CDP) (glutaredoxin) [c] : cdp + grxrd --> dcdp + grxox + h2o (RIBONUCLEOSIDE-DIP-REDUCTII-RXN) (:EXPANDED-RXN-MATCH) RNDR3 ribonucleoside-diphosphate reductase (CDP) [c] : cdp + trdrd --> dcdp + h2o + trdox (RIBONUCLEOSIDE-DIP-REDUCTI-RXN CDPREDUCT-RXN) (:EXPANDED-RXN-MATCH) RNDR2b ribonucleoside-diphosphate reductase (GDP) (glutaredoxin) [c] : gdp + grxrd --> dgdp + grxox + h2o (RXN0-748) (:EXPANDED-RXN-MATCH) RNDR2 ribonucleoside-diphosphate reductase (GDP) [c] : gdp + trdrd --> dgdp + h2o + trdox (GDPREDUCT-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN) (:EXPANDED-RXN-MATCH) RNDR1b ribonucleoside-diphosphate reductase (ADP) (glutaredoxin) [c] : adp + grxrd --> dadp + grxox + h2o (RXN0-747) (:EXPANDED-RXN-MATCH) RNDR1 ribonucleoside-diphosphate reductase (ADP) [c] : adp + trdrd --> dadp + h2o + trdox (ADPREDUCT-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN) (:EXPANDED-RXN-MATCH) RMPA Rhamnulose-1-phosphate aldolase [c] : rml1p <==> dhap + lald-L (RHAMNULPALDOL-RXN) RMNtpp L-rhamnose transport via proton symport (periplasm) h[p] + rmn[p] --> h[c] + rmn[c] (TRANS-RXN-112) RMNtex L-rhamnose transport via diffusion (extracellular to periplasm) rmn[e] <==> rmn[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) RMK rhamnulokinase [c] : atp + rml --> adp + h + rml1p (RHAMNULOKIN-RXN) ((RIGHT REMOVE PROTON)) RMI L-rhamnose isomerase [c] : rmn <==> rml (RHAMNISOM-RXN) RIBtex ribose transport via diffusion (extracellular to periplasm) rib-D[e] <==> rib-D[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) RIBabcpp D-ribose transport via ABC system (periplasm) atp[c] + h2o[c] + rib-D[p] --> adp[c] + h[c] + pi[c] + rib-D[c] (ABC-28-RXN) ((RIGHT REMOVE PROTON)) RHCCE S-ribosylhomocysteine cleavage enzyme [c] : rhcys --> dhptd + hcys-L (RIBOSYLHOMOCYSTEINASE-RXN) (:METACYC) RHAT1 rhamnosyltransferase I (LPS core biosynthesis) [c] : dtdprmn + kphphhlipa --> dtdp + h + icolipa (:UNMAPPED-CPDS) RBP4E L-ribulose-phosphate 4-epimerase [c] : ru5p-L <==> xu5p-D (RIBULPEPIM-RXN) RBK_L1 L-ribulokinase (L-ribulose) [c] : atp + rbl-L --> adp + h + ru5p-L (RXN0-5116) ((RIGHT REMOVE PROTON)) RBK ribokinase [c] : atp + rib-D --> adp + h + r5p (RIBOKIN-RXN) ((RIGHT REMOVE PROTON)) RBFSb riboflavin synthase [c] : (2) dmlz --> 4r5au + ribflv (RIBOFLAVIN-SYN-RXN) RBFSa riboflavin synthase [c] : 4r5au + db4p --> dmlz + (2) h2o + pi (LUMAZINESYN-RXN) RBFK riboflavin kinase [c] : atp + ribflv --> adp + fmn + h (RIBOFLAVINKIN-RXN) ((RIGHT REMOVE PROTON)) R5Ptex Ribose 5-phosphate transport via diffusion (extracellular to periplasm) r5p[e] <==> r5p[p] (:EXCHANGE) R5PPpp ribose 5-phosphate phosphatase [p] : h2o + r5p --> pi + rib-D R5PP ribose 5-phosphate phosphatase [c] : h2o + r5p --> pi + rib-D (SUGAR-PHOSPHATASE-RXN) (:EXPANDED-RXN-MATCH) R1PK ribose 1-phosphokinase [c] : atp + r1p --> adp + h + r15bp (RXN0-1402) ((RIGHT REMOVE PROTON)) R15BPK ribose-1,5-bisphosphokinase [c] : atp + r15bp --> adp + prpp (RXN0-1401) QULNS quinolinate synthase [c] : dhap + iasp --> (2) h2o + pi + quln (QUINOLINATE-SYNTHA-RXN) QMO3 quinol monooxygenase (menaquinol 8) [c] : mql8 + (2) o2 --> (2) h + mqn8 + (2) o2s QMO2 quinol monooxygenase (Ubiquinol-8) [c] : (2) o2 + q8h2 --> (2) h + (2) o2s + q8 PYRtex pyruvate transport via diffusion (extracellular to periplasm) pyr[e] <==> pyr[p] (:EXCHANGE) PYRt2rpp pyruvate reversible transport via proton symport (periplasm) h[p] + pyr[p] <==> h[c] + pyr[c] PYNP2r pyrimidine-nucleoside phosphorylase (uracil) [c] : pi + uri <==> r1p + ura (URPHOS-RXN) PYK pyruvate kinase [c] : adp + h + pep --> atp + pyr (PEPDEPHOS-RXN) ((LEFT REMOVE PROTON)) PYDXPP Pyridoxal 5-phosphate phosphatase [c] : h2o + pydx5p --> pi + pydx (3.1.3.74-RXN) (:METACYC) PYDXNK pyridoxine kinase [c] : atp + pydxn --> adp + h + pdx5p (PNKIN-RXN) ((RIGHT REMOVE PROTON)) PYDXK pyridoxal kinase [c] : atp + pydx --> adp + h + pydx5p (PYRIDOXKIN-RXN) ((RIGHT REMOVE PROTON)) PYDAMK pyridoxamine kinase [c] : atp + pydam --> adp + h + pyam5p (PYRAMKIN-RXN) ((RIGHT REMOVE PROTON)) PYAM5PO pyridoxamine 5'-phosphate oxidase [c] : h2o + o2 + pyam5p --> h2o2 + nh4 + pydx5p (PMPOXI-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) PUNP7 purine-nucleoside phosphorylase (Xanthosine) [c] : pi + xtsn <==> r1p + xan (XANTHOSINEPHOSPHORY-RXN) PUNP6 purine-nucleoside phosphorylase (Deoxyinosine) [c] : din + pi <==> 2dr1p + hxan (DEOXYINOPHOSPHOR-RXN) PUNP5 purine-nucleoside phosphorylase (Inosine) [c] : ins + pi <==> hxan + r1p (INOPHOSPHOR-RXN) PUNP4 purine-nucleoside phosphorylase (Deoxyguanosine) [c] : dgsn + pi <==> 2dr1p + gua (DEOXYGUANPHOSPHOR-RXN) PUNP3 purine-nucleoside phosphorylase (Guanosine) [c] : gsn + pi <==> gua + r1p (GUANPHOSPHOR-RXN) PUNP2 purine-nucleoside phosphorylase (Deoxyadenosine) [c] : dad-2 + pi <==> 2dr1p + ade (DEOXYADENPHOSPHOR-RXN) PUNP1 purine-nucleoside phosphorylase (Adenosine) [c] : adn + pi <==> ade + r1p (ADENPHOSPHOR-RXN) PTRCtex putrescine transport via diffusion (extracellular to periplasm) ptrc[e] <==> ptrc[p] (:EXCHANGE) PTRCt2rpp putrescine transport in via proton symport, reversible (periplasm) h[p] + ptrc[p] <==> h[c] + ptrc[c] (TRANS-RXN-69) PTRCt2pp putrescine transport in via proton symport h[p] + ptrc[p] --> h[c] + ptrc[c] (TRANS-RXN-69) PTRCabcpp putrescine transport via ABC system (periplasm) atp[c] + h2o[c] + ptrc[p] --> adp[c] + h[c] + pi[c] + ptrc[c] (ABC-25-RXN) ((RIGHT REMOVE PROTON)) PTRCTA Putrescine Transaminase [c] : akg + ptrc --> 4abutn + glu-L (PUTTRANSAM-RXN) PTRCORNt7pp putrescine/ornithine antiporter (periplasm) orn[c] + ptrc[p] <==> orn[p] + ptrc[c] PTPATi pantetheine-phosphate adenylyltransferase [c] : atp + h + pan4p --> dpcoa + ppi (PANTEPADENYLYLTRAN-RXN) ((LEFT REMOVE PROTON)) PTHRpp phospho-L-threonine phosphatase (periplasmic) [p] : h2o + thrp --> pi + thr-L PTAr phosphotransacetylase [c] : accoa + pi <==> actp + coa (PHOSACETYLTRANS-RXN) PTA2 Phosphate acetyltransferase [c] : pi + ppcoa --> coa + ppap (PTAALT-RXN) PSSA181 Phosphatidylserine syntase (n-C18:1) [c] : cdpdodec11eg + ser-L --> cmp + h + ps181 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA180 Phosphatidylserine syntase (n-C18:0) [c] : cdpdodecg + ser-L --> cmp + h + ps180 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA161 Phosphatidylserine syntase (n-C16:1) [c] : cdpdhdec9eg + ser-L --> cmp + h + ps161 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA160 Phosphatidylserine syntase (n-C16:0) [c] : cdpdhdecg + ser-L --> cmp + h + ps160 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA141 Phosphatidylserine syntase (n-C14:1) [c] : cdpdtdec7eg + ser-L --> cmp + h + ps141 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA140 Phosphatidylserine syntase (n-C14:0) [c] : cdpdtdecg + ser-L --> cmp + h + ps140 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSSA120 Phosphatidylserine syntase (n-C12:0) [c] : cdpdddecg + ser-L --> cmp + h + ps120 (PHOSPHASERSYN-RXN) ((RIGHT REMOVE PROTON)) PSP_Lpp phospho-L-serine phosphatase (periplasmic) [p] : h2o + pser-L --> pi + ser-L PSP_L phosphoserine phosphatase (L-serine) [c] : h2o + pser-L --> pi + ser-L (RXN0-5114) PSERtex phospho-L-serine transport via diffusion (extracellular to periplasm) pser-L[e] <==> pser-L[p] (:EXCHANGE) PSERT phosphoserine transaminase [c] : 3php + glu-L --> akg + pser-L (PSERTRANSAM-RXN) PSD181 Phosphatidylserine decarboxylase (n-C18:1) [c] : h + ps181 --> co2 + pe181 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD180 Phosphatidylserine decarboxylase (n-C18:0) [c] : h + ps180 --> co2 + pe180 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD161 Phosphatidylserine decarboxylase (n-C16:1) [c] : h + ps161 --> co2 + pe161 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD160 Phosphatidylserine decarboxylase (n-C16:0) [c] : h + ps160 --> co2 + pe160 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD141 Phosphatidylserine decarboxylase (n-C14:1) [c] : h + ps141 --> co2 + pe141 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD140 Phosphatidylserine decarboxylase (n-C14:0) [c] : h + ps140 --> co2 + pe140 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSD120 Phosphatidylserine decarboxylase (n-C12:0) [c] : h + ps120 --> co2 + pe120 (PHOSPHASERDECARB-RXN) ((LEFT REMOVE PROTON)) PSCVT 3-phosphoshikimate 1-carboxyvinyltransferase [c] : pep + skm5p <==> 3psme + pi (2.5.1.19-RXN) PRPPS phosphoribosylpyrophosphate synthetase [c] : atp + r5p <==> amp + h + prpp (PRPPSYN-RXN) ((RIGHT REMOVE PROTON)) PROtex L-proline transport via diffusion (extracellular to periplasm) pro-L[e] <==> pro-L[p] (:EXCHANGE) PROt4pp Na+/Proline-L symporter (periplasm) na1[p] + pro-L[p] --> na1[c] + pro-L[c] (TRANS-RXN-118) PROt2rpp L-proline reversible transport via proton symport (periplasm) h[p] + pro-L[p] <==> h[c] + pro-L[c] (TRANS-RXN-29) PROabcpp L-proline transport via ABC system (periplasm) atp[c] + h2o[c] + pro-L[p] --> adp[c] + h[c] + pi[c] + pro-L[c] (ABC-26-RXN) ((RIGHT REMOVE PROTON)) PROTRS Prolyl-tRNA synthetase [c] : atp + pro-L + trnapro --> amp + ppi + protrna (PROLINE--TRNA-LIGASE-RXN) PROGLYtex L-Prolinylglycine transport via diffusion (extracellular to periplasm) progly[e] <==> progly[p] (:UNMAPPED-CPDS) PROGLYabcpp L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm) atp[c] + h2o[c] + progly[p] --> adp[c] + h[c] + pi[c] + progly[c] (:UNMAPPED-CPDS) PROD2 Proline dehydrogenase [c] : fad + pro-L --> 1pyr5c + fadh2 + h (RXN-821) ((RIGHT REMOVE PROTON)) PRMICI 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase [c] : prfp <==> prlp (PRIBFAICARPISOM-RXN) PRFGS phosphoribosylformylglycinamidine synthase [c] : atp + fgam + gln-L + h2o --> adp + fpram + glu-L + h + pi (FGAMSYN-RXN) ((RIGHT REMOVE PROTON)) PRATPP phosphoribosyl-ATP pyrophosphatase [c] : h2o + prbatp --> h + ppi + prbamp (HISTPRATPHYD-RXN) ((RIGHT REMOVE PROTON)) PRASCS phosphoribosylaminoimidazolesuccinocarboxamide synthase [c] : 5aizc + asp-L + atp <==> 25aics + adp + h + pi (SAICARSYN-RXN) ((RIGHT REMOVE PROTON)) PRAMPC phosphoribosyl-AMP cyclohydrolase [c] : h2o + prbamp --> prfp (HISTCYCLOHYD-RXN) PRAIi phosphoribosylanthranilate isomerase (irreversible) [c] : pran --> 2cpr5p (PRAISOM-RXN) PRAIS phosphoribosylaminoimidazole synthase [c] : atp + fpram --> adp + air + (2) h + pi (AIRS-RXN) ((RIGHT REMOVE PROTON)) PRAGSr phosphoribosylglycinamide synthase [c] : atp + gly + pram <==> adp + gar + h + pi (GLYRIBONUCSYN-RXN) ((RIGHT REMOVE PROTON)) PPTtex Phosphonate transport via diffusion (extracellular to periplasm) ppt[e] <==> ppt[p] (:EXCHANGE) PPTHpp Phosphonate hydrogenase (periplasm) [p] : h2o + ppt --> h2 + pi PPS phosphoenolpyruvate synthase [c] : atp + h2o + pyr --> amp + (2) h + pep + pi (PEPSYNTH-RXN) ((RIGHT REMOVE PROTON)) PPPNtex 3-phenylpropionate transport via diffusion (extracellular to periplasm) pppn[e] <==> pppn[p] (:EXCHANGE) PPPNt2rpp 3-phenylpropionate transport via proton symport, reversible (periplasm) h[p] + pppn[p] <==> h[c] + pppn[c] PPPNDO Phenylpropanoate Dioxygenase [c] : h + nadh + o2 + pppn --> cechddd + nad (HCAMULTI-RXN) PPPGO3 protoporphyrinogen oxidase (anaerobic) [c] : (3) fum + pppg9 --> ppp9 + (3) succ PPPGO protoporphyrinogen oxidase (aerobic) [c] : (1.5) o2 + pppg9 --> (3) h2o + ppp9 (PROTOPORGENOXI-RXN) PPNDH prephenate dehydratase [c] : h + pphn --> co2 + h2o + phpyr (PREPHENATEDEHYDRAT-RXN) ((LEFT REMOVE PROTON)) PPND prephenate dehydrogenase [c] : nad + pphn --> 34hpp + co2 + nadh (PREPHENATEDEHYDROG-RXN) PPNCL2 phosphopantothenate-cysteine ligase [c] : 4ppan + ctp + cys-L --> 4ppcys + cmp + h + ppi (P-PANTOCYSLIG-RXN) ((RIGHT REMOVE PROTON)) PPM2 phosphopentomutase 2 (deoxyribose) [c] : 2dr1p <==> 2dr5p (D-PPENTOMUT-RXN) PPM phosphopentomutase [c] : r1p <==> r5p (PPENTOMUT-RXN) PPKr polyphosphate kinase [c] : atp + pi <==> adp + ppi PPK2r polyphosphate kinase [c] : atp + ppi <==> adp + pppi PPGPPDP guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [c] : h2o + ppgpp --> gdp + ppi (PPGPPSYN-RXN) PPCSCT Propanoyl-CoA: succinate CoA-transferase [c] : ppcoa + succ --> ppa + succoa (RXN0-268) PPCK phosphoenolpyruvate carboxykinase [c] : atp + oaa --> adp + co2 + pep (PEPCARBOXYKIN-RXN) PPCDC phosphopantothenoylcysteine decarboxylase [c] : 4ppcys + h --> co2 + pan4p (P-PANTOCYSDECARB-RXN) ((LEFT REMOVE PROTON)) PPC phosphoenolpyruvate carboxylase [c] : co2 + h2o + pep --> h + oaa + pi (PEPCARBOX-RXN) ((RIGHT REMOVE PROTON)) PPBNGS porphobilinogen synthase [c] : (2) 5aop --> h + (2) h2o + ppbng (PORPHOBILSYNTH-RXN) ((RIGHT REMOVE PROTON)) PPALtpp propanal transport via channel (periplasm) ppal[c] <==> ppal[p] (:EXCHANGE) PPALtex propanal transport via diffusion (extracellular to periplasm) ppal[e] <==> ppal[p] (:EXCHANGE) PPAKr Propionate kinase [c] : adp + ppap <==> atp + ppa (PROPKIN-RXN) PPA2 inorganic triphosphatase [c] : h2o + pppi --> h + pi + ppi (TRIPHOSPHATASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) PPA inorganic diphosphatase [c] : h2o + ppi --> h + (2) pi (INORGPYROPHOSPHAT-RXN) ((RIGHT REMOVE PROTON)) POX pyruvate oxidase [c] : h2o + pyr + q8 --> ac + co2 + q8h2 (PYRUVOXID-RXN) PNTOtex Pantothenate transport via diffusion (extracellular to periplasm) pnto-R[e] <==> pnto-R[p] (:EXCHANGE) PNTOt4pp Pantothenate sodium symporter (periplasm) na1[p] + pnto-R[p] --> na1[c] + pnto-R[c] (TRANS-RXN-117) PNTK pantothenate kinase [c] : atp + pnto-R --> 4ppan + adp + h (PANTOTHENATE-KIN-RXN) ((RIGHT REMOVE PROTON)) PMPK phosphomethylpyrimidine kinase [c] : 4ampm + atp --> 2mahmp + adp (PYRIMSYN3-RXN) PMDPHT pyrimidine phosphatase [c] : 5aprbu + h2o --> 4r5au + pi (RIBOPHOSPHAT-RXN) PMANM phosphomannomutase [c] : man1p <==> man6p (PHOSMANMUT-RXN) PLIPA2G181pp Phospholipase A2 (phosphatidylglycerol, n-C18:1) (periplasm) [p] : h2o + pg181 --> 1agpg181 + h + ocdcea (:UNMAPPED-CPDS) PLIPA2G180pp Phospholipase A2 (phosphatidylglycerol, n-C18:0) (periplasm) [p] : h2o + pg180 --> 1agpg180 + h + ocdca (:UNMAPPED-CPDS) PLIPA2G161pp Phospholipase A2 (phosphatidylglycerol, n-C16:1) (periplasm) [p] : h2o + pg161 --> 1agpg161 + h + hdcea (:UNMAPPED-CPDS) PLIPA2G160pp Phospholipase A2 (phosphatidylglycerol, n-C16:0) (periplasm) [p] : h2o + pg160 --> 1agpg160 + h + hdca (:UNMAPPED-CPDS) PLIPA2G141pp Phospholipase A2 (phosphatidylglycerol, n-C14:1) (periplasm) [p] : h2o + pg141 --> 1agpg141 + h + ttdcea (:UNMAPPED-CPDS) PLIPA2G140pp Phospholipase A2 (phosphatidylglycerol, n-C14:0) (periplasm) [p] : h2o + pg140 --> 1agpg140 + h + ttdca (:UNMAPPED-CPDS) PLIPA2G120pp Phospholipase A2 (phosphatidylglycerol, n-C12:0) (periplasm) [p] : h2o + pg120 --> 1agpg120 + ddca + h (:UNMAPPED-CPDS) PLIPA2E181pp Phospholipase A2 (phosphatidylethanolamine, n-C18:1) (periplasm) [p] : h2o + pe181 --> 1agpe181 + h + ocdcea (:UNMAPPED-CPDS) PLIPA2E180pp Phospholipase A2 (phosphatidylethanolamine, n-C18:0) (periplasm) [p] : h2o + pe180 --> 1agpe180 + h + ocdca (:UNMAPPED-CPDS) PLIPA2E161pp Phospholipase A2 (phosphatidylethanolamine, n-C16:1) (periplasm) [p] : h2o + pe161 --> 1agpe161 + h + hdcea (:UNMAPPED-CPDS) PLIPA2E160pp Phospholipase A2 (phosphatidylethanolamine, n-C16:0) (periplasm) [p] : h2o + pe160 --> 1agpe160 + h + hdca (:UNMAPPED-CPDS) PLIPA2E141pp Phospholipase A2 (phosphatidylethanolamine, n-C14:1) (periplasm) [p] : h2o + pe141 --> 1agpe141 + h + ttdcea (:UNMAPPED-CPDS) PLIPA2E140pp Phospholipase A2 (phosphatidylethanolamine, n-C14:0) (periplasm) [p] : h2o + pe140 --> 1agpe140 + h + ttdca (:UNMAPPED-CPDS) PLIPA2E120pp Phospholipase A2 (phosphatidylethanolamine, n-C12:0) (periplasm) [p] : h2o + pe120 --> 1agpe120 + ddca + h (:UNMAPPED-CPDS) PLIPA2A181pp Phospholipase A2 (phosphatidate, n-C18:1) (periplasm) [p] : h2o + pa181 --> 1odec11eg3p + h + ocdcea PLIPA2A180pp Phospholipase A2 (phosphatidate, n-C18:0) (periplasm) [p] : h2o + pa180 --> 1odecg3p + h + ocdca PLIPA2A161pp Phospholipase A2 (phosphatidate, n-C16:1) (periplasm) [p] : h2o + pa161 --> 1hdec9eg3p + h + hdcea PLIPA2A160pp Phospholipase A2 (phosphatidate, n-C16:0) (periplasm) [p] : h2o + pa160 --> 1hdecg3p + h + hdca PLIPA2A141pp Phospholipase A2 (phosphatidate, n-C14:1) (periplasm) [p] : h2o + pa141 --> 1tdec7eg3p + h + ttdcea (:UNMAPPED-CPDS) PLIPA2A140pp Phospholipase A2 (phosphatidate, n-C14:0) (periplasm) [p] : h2o + pa140 --> 1tdecg3p + h + ttdca (:UNMAPPED-CPDS) PLIPA2A120pp Phospholipase A2 (phosphatidate, n-C12:0) (periplasm) [p] : h2o + pa120 --> 1ddecg3p + ddca + h PLIPA1G181pp Phospholipase A1 (phosphatidylglycerol, n-C18:1) (periplasm) [p] : h2o + pg181 --> 2agpg181 + h + ocdcea (:UNMAPPED-CPDS) PLIPA1G180pp Phospholipase A1 (phosphatidylglycerol, n-C18:0) (periplasm) [p] : h2o + pg180 --> 2agpg180 + h + ocdca (:UNMAPPED-CPDS) PLIPA1G161pp Phospholipase A1 (phosphatidylglycerol, n-C16:1) (periplasm) [p] : h2o + pg161 --> 2agpg161 + h + hdcea (:UNMAPPED-CPDS) PLIPA1G160pp Phospholipase A1 (phosphatidylglycerol, n-C16:0) (periplasm) [p] : h2o + pg160 --> 2agpg160 + h + hdca (:UNMAPPED-CPDS) PLIPA1G141pp Phospholipase A1 (phosphatidylglycerol, n-C14:1) (periplasm) [p] : h2o + pg141 --> 2agpg141 + h + ttdcea (:UNMAPPED-CPDS) PLIPA1G140pp Phospholipase A1 (phosphatidylglycerol, n-C14:0) (periplasm) [p] : h2o + pg140 --> 2agpg140 + h + ttdca (:UNMAPPED-CPDS) PLIPA1G120pp Phospholipase A1 (phosphatidylglycerol, n-C12:0) (periplasm) [p] : h2o + pg120 --> 2agpg120 + ddca + h (:UNMAPPED-CPDS) PLIPA1E181pp Phospholipase A1 (phosphatidylethanolamine, n-C18:1) (periplasm) [p] : h2o + pe181 --> 2agpe181 + h + ocdcea (:UNMAPPED-CPDS) PLIPA1E180pp Phospholipase A1 (phosphatidylethanolamine, n-C18:0) (periplasm) [p] : h2o + pe180 --> 2agpe180 + h + ocdca (:UNMAPPED-CPDS) PLIPA1E161pp Phospholipase A1 (phosphatidylethanolamine, n-C16:1) (periplasm) [p] : h2o + pe161 --> 2agpe161 + h + hdcea (:UNMAPPED-CPDS) PLIPA1E160pp Phospholipase A1 (phosphatidylethanolamine, n-C16:0) (periplasm) [p] : h2o + pe160 --> 2agpe160 + h + hdca (:UNMAPPED-CPDS) PLIPA1E141pp Phospholipase A1 (phosphatidylethanolamine, n-C14:1) (periplasm) [p] : h2o + pe141 --> 2agpe141 + h + ttdcea (:UNMAPPED-CPDS) PLIPA1E140pp Phospholipase A1 (phosphatidylethanolamine, n-C14:0) (periplasm) [p] : h2o + pe140 --> 2agpe140 + h + ttdca (:UNMAPPED-CPDS) PLIPA1E120pp Phospholipase A1 (phosphatidylethanolamine, n-C12:0) (periplasm) [p] : h2o + pe120 --> 2agpe120 + ddca + h (:UNMAPPED-CPDS) PLIPA1A181pp Phospholipase A1 (phosphatidate, n-C18:1) (periplasm) [p] : h2o + pa181 --> 2odec11eg3p + h + ocdcea (:UNMAPPED-CPDS) PLIPA1A180pp Phospholipase A1 (phosphatidate, n-C18:0) (periplasm) [p] : h2o + pa180 --> 2odecg3p + h + ocdca (:UNMAPPED-CPDS) PLIPA1A161pp Phospholipase A1 (phosphatidate, n-C16:1) (periplasm) [p] : h2o + pa161 --> 2hdec9eg3p + h + hdcea (:UNMAPPED-CPDS) PLIPA1A160pp Phospholipase A1 (phosphatidate, n-C16:0) (periplasm) [p] : h2o + pa160 --> 2hdecg3p + h + hdca (:UNMAPPED-CPDS) PLIPA1A141pp Phospholipase A1 (phosphatidate, n-C14:1) (periplasm) [p] : h2o + pa141 --> 2tdec7eg3p + h + ttdcea (:UNMAPPED-CPDS) PLIPA1A140pp Phospholipase A1 (phosphatidate, n-C14:0) (periplasm) [p] : h2o + pa140 --> 2tdecg3p + h + ttdca (:UNMAPPED-CPDS) PLIPA1A120pp Phospholipase A1 (phosphatidate, n-C12:0) (periplasm) [p] : h2o + pa120 --> 2ddecg3p + ddca + h (:UNMAPPED-CPDS) PIuabcpp phosphate transport via ABC system (uptake, periplasm) atp[c] + h2o[c] + pi[p] --> adp[c] + h[c] + (2) pi[c] PItex phosphate transport via diffusion (extracellular to periplasm) pi[e] <==> pi[p] (:EXCHANGE) PIt2rpp phosphate reversible transport via symport (periplasm) h[p] + pi[p] <==> h[c] + pi[c] (TRANS-RXN-114) PHYTSpp Phytase (periplasm) [p] : (6) h2o + minohp --> inost + (6) pi PHEtex L-phenylalanine transport via diffusion (extracellular to periplasm) phe-L[e] <==> phe-L[p] (:EXCHANGE) PHEt2rpp L-phenylalanine reversible transport via proton symport (periplasm) h[p] + phe-L[p] <==> h[c] + phe-L[c] (TRANS-RXN-56) PHETRS Phenylalanyl-tRNA synthetase [c] : atp + phe-L + trnaphe --> amp + phetrna + ppi (PHENYLALANINE--TRNA-LIGASE-RXN) PHETA1 phenylalanine transaminase [c] : akg + phe-L <==> glu-L + phpyr (PHEAMINOTRANS-RXN) PHEMEtiex protoheme transport irreversible out via diffusion (periplasm to extracellular) pheme[p] --> pheme[e] (:EXCHANGE) PHEMEabcpp protoheme transport via ABC system (periplasm) atp[c] + h2o[c] + pheme[c] --> adp[c] + h[c] + pheme[p] + pi[c] (TRANS-RXN0-162) ((RIGHT REMOVE PROTON)) PGSA181 Phosphatidylglycerol synthase (n-C18:1) [c] : cdpdodec11eg + glyc3p --> cmp + h + pgp181 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA180 Phosphatidylglycerol synthase (n-C18:0) [c] : cdpdodecg + glyc3p --> cmp + h + pgp180 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA161 Phosphatidylglycerol synthase (n-C16:1) [c] : cdpdhdec9eg + glyc3p --> cmp + h + pgp161 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA160 Phosphatidylglycerol synthase (n-C16:0) [c] : cdpdhdecg + glyc3p --> cmp + h + pgp160 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA141 Phosphatidylglycerol synthase (n-C14:1) [c] : cdpdtdec7eg + glyc3p --> cmp + h + pgp141 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA140 Phosphatidylglycerol synthase (n-C14:0) [c] : cdpdtdecg + glyc3p --> cmp + h + pgp140 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGSA120 Phosphatidylglycerol synthase (n-C12:0) [c] : cdpdddecg + glyc3p --> cmp + h + pgp120 (PHOSPHAGLYPSYN-RXN) ((RIGHT REMOVE PROTON)) PGPP181pp phosphatidylglycerol phosphate phosphatase (periplasm, n-C18:1) [p] : h2o + pgp181 --> pg181 + pi PGPP181 phosphatidylglycerol phosphate phosphatase (n-C18:1) [c] : h2o + pgp181 --> pg181 + pi (PGPPHOSPHA-RXN) PGPP180pp phosphatidylglycerol phosphate phosphatase (periplasm, n-C18:0) [p] : h2o + pgp180 --> pg180 + pi PGPP180 phosphatidylglycerol phosphate phosphatase (n-C18:0) [c] : h2o + pgp180 --> pg180 + pi (PGPPHOSPHA-RXN) PGPP161pp phosphatidylglycerol phosphate phosphatase (periplasm, n-C16:1) [p] : h2o + pgp161 --> pg161 + pi PGPP161 phosphatidylglycerol phosphate phosphatase (n-C16:1) [c] : h2o + pgp161 --> pg161 + pi (PGPPHOSPHA-RXN) PGPP160pp phosphatidylglycerol phosphate phosphatase (periplasm, n-C16:0) [p] : h2o + pgp160 --> pg160 + pi PGPP160 phosphatidylglycerol phosphate phosphatase (n-C16:0) [c] : h2o + pgp160 --> pg160 + pi (PGPPHOSPHA-RXN) PGPP141pp phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:1) [p] : h2o + pgp141 --> pg141 + pi PGPP141 phosphatidylglycerol phosphate phosphatase (n-C14:1) [c] : h2o + pgp141 --> pg141 + pi (PGPPHOSPHA-RXN) PGPP140pp phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:0) [p] : h2o + pgp140 --> pg140 + pi PGPP140 phosphatidylglycerol phosphate phosphatase (n-C14:0) [c] : h2o + pgp140 --> pg140 + pi (PGPPHOSPHA-RXN) PGPP120pp phosphatidylglycerol phosphate phosphatase (periplasm, n-C14:0) [p] : h2o + pgp120 --> pg120 + pi PGPP120 phosphatidylglycerol phosphate phosphatase (n-C14:0) [c] : h2o + pgp120 --> pg120 + pi (PGPPHOSPHA-RXN) PGP181abcpp phosphatidylglycerophosphate transport via ABC system (n-C18:1, periplasm) atp[c] + h2o[c] + pgp181[c] --> adp[c] + h[c] + pgp181[p] + pi[c] PGP180abcpp phosphatidylglycerophosphate transport via ABC system (n-C18:0, periplasm) atp[c] + h2o[c] + pgp180[c] --> adp[c] + h[c] + pgp180[p] + pi[c] PGP161abcpp phosphatidylglycerophosphate transport via ABC system (n-C16:1, periplasm) atp[c] + h2o[c] + pgp161[c] --> adp[c] + h[c] + pgp161[p] + pi[c] PGP160abcpp phosphatidylglycerophosphate transport via ABC system (n-C16:0, periplasm) atp[c] + h2o[c] + pgp160[c] --> adp[c] + h[c] + pgp160[p] + pi[c] PGP141abcpp phosphatidylglycerophosphate transport via ABC system (n-C14:1, periplasm) atp[c] + h2o[c] + pgp141[c] --> adp[c] + h[c] + pgp141[p] + pi[c] PGP140abcpp phosphatidylglycerophosphate transport via ABC system (n-C14:0, periplasm) atp[c] + h2o[c] + pgp140[c] --> adp[c] + h[c] + pgp140[p] + pi[c] PGP120abcpp phosphatidylglycerophosphate transport via ABC system (n-C12:0, periplasm) atp[c] + h2o[c] + pgp120[c] --> adp[c] + h[c] + pgp120[p] + pi[c] PGMT phosphoglucomutase [c] : g1p <==> g6p PGM phosphoglycerate mutase [c] : 2pg <==> 3pg (3PGAREARR-RXN) PGLYCP Phosphoglycolate phosphatase [c] : 2pglyc + h2o --> glyclt + pi (GPH-RXN) PGL 6-phosphogluconolactonase [c] : 6pgl + h2o --> 6pgc + h (6PGLUCONOLACT-RXN) ((RIGHT REMOVE PROTON)) PGK phosphoglycerate kinase [c] : 3pg + atp <==> 13dpg + adp (PHOSGLYPHOS-RXN) PGI glucose-6-phosphate isomerase [c] : g6p <==> f6p (PGLUCISOM-RXN) PGCD phosphoglycerate dehydrogenase [c] : 3pg + nad --> 3php + h + nadh (PGLYCDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) PGAMT phosphoglucosamine mutase [c] : gam1p <==> gam6p (PHOSGLUCOSAMINEMUT-RXN) PG181abcpp phosphatidylglycerol transport via ABC system (n-C18:1, periplasm) atp[c] + h2o[c] + pg181[c] --> adp[c] + h[c] + pg181[p] + pi[c] PG180abcpp phosphatidylglycerol transport via ABC system (n-C18:0, periplasm) atp[c] + h2o[c] + pg180[c] --> adp[c] + h[c] + pg180[p] + pi[c] PG161abcpp phosphatidylglycerol transport via ABC system (n-C16:1, periplasm) atp[c] + h2o[c] + pg161[c] --> adp[c] + h[c] + pg161[p] + pi[c] PG160abcpp phosphatidylglycerol transport via ABC system (n-C16:0, periplasm) atp[c] + h2o[c] + pg160[c] --> adp[c] + h[c] + pg160[p] + pi[c] PG141abcpp phosphatidylglycerol transport via ABC system (n-C14:1, periplasm) atp[c] + h2o[c] + pg141[c] --> adp[c] + h[c] + pg141[p] + pi[c] PG140abcpp phosphatidylglycerol transport via ABC system (n-C14:0, periplasm) atp[c] + h2o[c] + pg140[c] --> adp[c] + h[c] + pg140[p] + pi[c] PG120abcpp phosphatidylglycerol transport via ABC system (n-C12:0, periplasm) atp[c] + h2o[c] + pg120[c] --> adp[c] + h[c] + pg120[p] + pi[c] PFL pyruvate formate lyase [c] : coa + pyr --> accoa + for (PYRUVFORMLY-RXN) PFK_2 Phosphofructokinase [c] : atp + tag6p-D --> adp + h + tagdp-D (TAGAKIN-RXN) ((RIGHT REMOVE PROTON)) PFK phosphofructokinase [c] : atp + f6p --> adp + fdp + h (6PFRUCTPHOS-RXN) ((RIGHT REMOVE PROTON)) PETNT181pp phosphoethanolamine transferase (c-C16:1) [p] : lipa + pe181 --> 12dgr181 + enlipa PETNT161pp phosphoethanolamine transferase (c-C16:1) [p] : lipa + pe161 --> 12dgr161 + enlipa PERD Erythronate 4-phosphate (4per) dehydrogenase [c] : 4per + nad <==> h + nadh + ohpb (ERYTHRON4PDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) PEAMNtex phenethylamine transport via diffusion (extracellular to periplasm) peamn[e] <==> peamn[p] (:EXCHANGE) PEAMNOpp Phenethylamine oxidase [p] : h2o + o2 + peamn --> h2o2 + nh4 + pacald PE181abcpp phosphatidylethanolamine transport via ABC system (n-C18:1, periplasm) atp[c] + h2o[c] + pe181[c] --> adp[c] + h[c] + pe181[p] + pi[c] PE180abcpp phosphatidylethanolamine transport via ABC system (n-C18:0, periplasm) atp[c] + h2o[c] + pe180[c] --> adp[c] + h[c] + pe180[p] + pi[c] PE161abcpp phosphatidylethanolamine transport via ABC system (n-C16:1, periplasm) atp[c] + h2o[c] + pe161[c] --> adp[c] + h[c] + pe161[p] + pi[c] PE160abcpp phosphatidylethanolamine transport via ABC system (n-C16:0, periplasm) atp[c] + h2o[c] + pe160[c] --> adp[c] + h[c] + pe160[p] + pi[c] PE141abcpp phosphatidylethanolamine transport via ABC system (n-C14:1, periplasm) atp[c] + h2o[c] + pe141[c] --> adp[c] + h[c] + pe141[p] + pi[c] PE140abcpp phosphatidylethanolamine transport via ABC system (n-C14:0, periplasm) atp[c] + h2o[c] + pe140[c] --> adp[c] + h[c] + pe140[p] + pi[c] PE120abcpp phosphatidylethanolamine transport via ABC system (n-C12:0, periplasm) atp[c] + h2o[c] + pe120[c] --> adp[c] + h[c] + pe120[p] + pi[c] PDXPP Pyridoxine 5-phosphate phosphatase [c] : h2o + pdx5p --> pi + pydxn PDX5PS Pyridoxine 5'-phosphate synthase [c] : dxyl5p + nad + phthr --> co2 + h + (2) h2o + nadh + pdx5p + pi PDX5POi pyridoxine 5'-phosphate oxidase [c] : o2 + pdx5p --> h2o2 + pydx5p (PNPOXI-RXN) PDX5PO2 pyridoxine 5'-phosphate oxidase (anaerboic [c] : nad + pdx5p --> h + nadh + pydx5p PDH pyruvate dehydrogenase [c] : coa + nad + pyr --> accoa + co2 + nadh (PYRUVDEH-RXN) PDE1 3',5'-cyclic-nucleotide phosphodiesterase [c] : camp + h2o --> amp + h (RXN0-5038) ((RIGHT REMOVE PROTON)) PAPSR2 phosphoadenylyl-sulfate reductase (glutaredoxin) [c] : grxrd + paps --> grxox + (2) h + pap + so3 (PAPSREDGLUT-RXN) (:EXPANDED-RXN-MATCH) PAPSR phosphoadenylyl-sulfate reductase (thioredoxin) [c] : paps + trdrd --> (2) h + pap + so3 + trdox (1.8.4.8-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) PAPPT3 phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate) [c] : udcpp + ugmda --> uagmda + ump (PHOSNACMURPENTATRANS-RXN) (:EXPANDED-RXN-MATCH) PAPA181pp Phosphatidate phosphatase (periplasmic, n-C18:1) [p] : h2o + pa181 --> 12dgr181 + pi PAPA181 Phosphatidate phosphatase (n-C18:1) [c] : h2o + pa181 --> 12dgr181 + pi (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA180pp Phosphatidate phosphatase (periplasmic, n-C18:0) [p] : h2o + pa180 --> 12dgr180 + pi PAPA180 Phosphatidate phosphatase (n-C18:0) [c] : h2o + pa180 --> 12dgr180 + pi (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA161pp Phosphatidate phosphatase (periplasmic, n-C16:1) [p] : h2o + pa161 --> 12dgr161 + pi PAPA161 Phosphatidate phosphatase (n-C16:1) [c] : h2o + pa161 --> 12dgr161 + pi (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA160pp Phosphatidate phosphatase (periplasmic, n-C16:0) [p] : h2o + pa160 --> 12dgr160 + pi PAPA160 Phosphatidate phosphatase (n-C16:0) [c] : h2o + pa160 --> 12dgr160 + pi (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA141pp Phosphatidate phosphatase (periplasmic, n-C14:1) [p] : h2o + pa141 --> 12dgr141 + pi PAPA141 Phosphatidate phosphatase (n-C14:1) [c] : h2o + pa141 --> 12dgr141 + pi (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA140pp Phosphatidate phosphatase (periplasmic, n-C14:0) [p] : h2o + pa140 --> 12dgr140 + pi PAPA140 Phosphatidate phosphatase (n-C14:0) [c] : h2o + pa140 --> 12dgr140 + pi (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PAPA120pp Phosphatidate phosphatase (periplasmic, n-C12:0) [p] : h2o + pa120 --> 12dgr120 + pi PAPA120 Phosphatidate phosphatase (n-C12:0) [c] : h2o + pa120 --> 12dgr120 + pi (PHOSPHATIDATE-PHOSPHATASE-RXN) (:METACYC) PANTS pantothenate synthase [c] : ala-B + atp + pant-R --> amp + h + pnto-R + ppi (PANTOATE-BETA-ALANINE-LIG-RXN) ((RIGHT REMOVE PROTON)) PACCOAL phenylacetate-CoA ligase [c] : atp + coa + pac --> amp + phaccoa + ppi (PHENYLACETATE--COA-LIGASE-RXN) PACALDtex phenethylacetaldehyde transport via diffusion (extracellular to periplasm) pacald[e] <==> pacald[p] (:EXCHANGE) PACALDt2rpp phenylacetaldehyde reversible transport via proton symport (periplasm) h[p] + pacald[p] <==> h[c] + pacald[c] PA181abcpp phosphatidate transport via ABC system (n-C18:1, periplasm) atp[c] + h2o[c] + pa181[c] --> adp[c] + h[c] + pa181[p] + pi[c] PA180abcpp phosphatidate transport via ABC system (n-C18:0, periplasm) atp[c] + h2o[c] + pa180[c] --> adp[c] + h[c] + pa180[p] + pi[c] PA161abcpp phosphatidate transport via ABC system (n-C16:1, periplasm) atp[c] + h2o[c] + pa161[c] --> adp[c] + h[c] + pa161[p] + pi[c] PA160abcpp phosphatidate transport via ABC system (n-C16:0, periplasm) atp[c] + h2o[c] + pa160[c] --> adp[c] + h[c] + pa160[p] + pi[c] PA141abcpp phosphatidate transport via ABC system (n-C14:1, periplasm) atp[c] + h2o[c] + pa141[c] --> adp[c] + h[c] + pa141[p] + pi[c] PA140abcpp phosphatidate transport via ABC system (n-C14:0, periplasm) atp[c] + h2o[c] + pa140[c] --> adp[c] + h[c] + pa140[p] + pi[c] PA120abcpp phosphatidate transport via ABC system (n-C12:0, periplasm) atp[c] + h2o[c] + pa120[c] --> adp[c] + h[c] + pa120[p] + pi[c] P5CR pyrroline-5-carboxylate reductase [c] : 1pyr5c + (2) h + nadph --> nadp + pro-L (PYRROLINECARBREDUCT-RXN) (:EXPANDED-RXN-MATCH) P5CD 1-pyrroline-5-carboxylate dehydrogenase [c] : 1pyr5c + (2) h2o + nad --> glu-L + h + nadh (PYRROLINECARBDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) OXGDC2 2-oxoglutarate decarboxylase [c] : akg + h + thmpp --> co2 + ssaltpp (2-OXOGLUT-DECARBOX-RXN) ((LEFT REMOVE PROTON)) OXAMTC oxamate transcarbamoylase [c] : oxur + pi --> cbp + oxam (OXAMATE-CARBAMOYLTRANSFERASE-RXN) (:METACYC) ORPT orotate phosphoribosyltransferase [c] : orot5p + ppi <==> orot + prpp (OROPRIBTRANS-RXN) ORNtex ornithine transport via diffusion (extracellular to periplasm) orn[e] <==> orn[p] (:EXCHANGE) ORNabcpp ornithine transport via ABC system (periplasm) atp[c] + h2o[c] + orn[p] --> adp[c] + h[c] + orn[c] + pi[c] (ABC-37-RXN) ((RIGHT REMOVE PROTON)) ORNDC Ornithine Decarboxylase [c] : h + orn --> co2 + ptrc (ORNDECARBOX-RXN) ((LEFT REMOVE PROTON)) OPHHX2 2-Octaprenylphenol hydroxylase (anaerobic) [c] : 2oph + h2o + nad --> 2ohph + h + nadh OPHHX 2-Octaprenylphenol hydroxylase [c] : 2oph + (0.5) o2 --> 2ohph (2-OCTAPRENYLPHENOL-HYDROX-RXN) OPHBDC Octaprenyl-hydroxybenzoate decarboxylase [c] : 3ophb + h --> 2oph + co2 (3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN) ((LEFT REMOVE PROTON)) OP4ENH 2-oxopent-4-enoate hydratase [c] : h2o + op4en --> 4h2opntn (2-OXOPENT-4-ENOATE-HYDRATASE-RXN) OMPHHX2 2-octaprenyl-6-methoxyphenol hydroxylase (anaerobic) [c] : 2omph + h2o + nad --> 2ombzl + h + nadh OMPHHX 2-octaprenyl-6-methoxyphenol hydroxylase [c] : 2omph + (0.5) o2 --> 2ombzl OMPDC orotidine-5'-phosphate decarboxylase [c] : h + orot5p --> co2 + ump (OROTPDECARB-RXN) ((LEFT REMOVE PROTON)) OMMBLHX2 2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (anaerobic) [c] : 2ommbl + h2o + nad --> 2omhmbl + h + nadh OMMBLHX 2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [c] : 2ommbl + (0.5) o2 --> 2omhmbl OMCDC 2-Oxo-4-methyl-3-carboxypentanoate decarboxylation [c] : 3c4mop + h --> 4mop + co2 (RXN-7800) ((LEFT REMOVE PROTON)) OMBZLM 2-Octaprenyl-6-methoxy-benzoquinol methylase [c] : 2ombzl + amet --> 2ommbl + ahcys + h (2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN) ((RIGHT REMOVE PROTON)) OHPHM 2-octaprenyl-6-hydroxyphenol methylase [c] : 2ohph + amet --> 2omph + ahcys + h (2-OCTAPRENYL-6-OHPHENOL-METHY-RXN) ((RIGHT REMOVE PROTON)) OHPBAT O-Phospho-4-hydroxy-L-threonine:2-oxoglutarate aminotransferase [c] : glu-L + ohpb <==> akg + phthr (PSERTRANSAMPYR-RXN) ODECOAI Octadecenoyl-coa cis-trans isomerization [c] : odecoa --> od2coa OCTDPS Octaprenyl pyrophosphate synthase [c] : frdp + (5) ipdp --> octdp + (5) ppi (OPPSYN-RXN) (:EXPANDED-RXN-MATCH) OCTAtex Octanoate transport via diffusion (extracellular to periplasm) octa[e] <==> octa[p] (:EXCHANGE) OCDCEAtexi Octadecenoate (n-C18:1) transport via facilitated irreversible diffusion (extracellular to periplasm) ocdcea[e] --> ocdcea[p] (:EXCHANGE) OCDCAtexi Octadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) ocdca[e] --> ocdca[p] (:EXCHANGE) OCBT ornithine carbamoyltransferase [c] : cbp + orn <==> citr-L + h + pi (ORNCARBAMTRANSFER-RXN) ((RIGHT REMOVE PROTON)) OBTFL 2-Oxobutanoate formate lyase [c] : 2obut + coa --> for + ppcoa (KETOBUTFORMLY-RXN) OAADC oxaloacetate decarboxylase [c] : h + oaa --> co2 + pyr (OXALODECARB-RXN) ((LEFT REMOVE PROTON)) O2tpp o2 transport via diffusion (periplasm) o2[p] <==> o2[c] (:EXCHANGE) O2tex oxygen transport via diffusion (extracellular to periplasm) o2[e] <==> o2[p] (:EXCHANGE) O2Stex superoxide anion transport via diffusion (extracellular to periplasm) o2s[e] <==> o2s[p] (:EXCHANGE) O16GLCT2 glucosyltransferase II (LPS O16 antigen biosynthesis) [c] : gfgaragund + udpg --> h + o16aund + udp (:UNMAPPED-CPDS) O16GLCT1 glucosyltransferase I (LPS O16 antigen biosynthesis) [c] : aragund + udpg --> garagund + h + udp (:UNMAPPED-CPDS) O16GALFT galactofuranosyltransferase (LPS O16 antigen biosynthesis) [c] : garagund + udpgalfur --> gfgaragund + h + udp (:UNMAPPED-CPDS) O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) o16aund[c] --> o16aund[p] (:UNMAPPED-CPDS) O16AT rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) [c] : accoa + ragund --> aragund + coa (:UNMAPPED-CPDS) O16AP3pp O16 antigen polymerase (periplasm) [p] : o16a3und + o16aund --> h + o16a4und + udcpdp (:UNMAPPED-CPDS) O16AP2pp O16 antigen polymerase (periplasm) [p] : o16a2und + o16aund --> h + o16a3und + udcpdp (:UNMAPPED-CPDS) O16AP1pp O16 antigen polymerase (periplasm) [p] : (2) o16aund --> h + o16a2und + udcpdp (:UNMAPPED-CPDS) O16A4Lpp O16 anitgen (x4) ligase (periplasm) [p] : colipa + o16a4und --> h + o16a4colipa + udcpdp (:UNMAPPED-CPDS) O16A4COLIPAtex O16 antigen (x4) core oligosaccharide lipid A transport (periplasm to extracellular) o16a4colipa[p] --> o16a4colipa[e] (:UNMAPPED-CPDS) NTRIR4pp nitrite Reductase (Menaquinole-8, periplasm) (2) h[p] + (3) mql8[c] + no2[p] --> (2) h2o[p] + (3) mqn8[c] + nh4[p] NTRIR3pp nitrite Reductase (Ubiquinole-8, periplasm) (2) h[p] + no2[p] + (3) q8h2[c] --> (2) h2o[p] + nh4[p] + (3) q8[c] NTRIR2x nitrite Reductase (NADH) [c] : (5) h + (3) nadh + no2 --> (2) h2o + (3) nad + nh4 NTPTP2 Nucleoside triphosphate tripolyhydrolase [c] : gtp + h2o --> gsn + pppi NTPTP1 Nucleoside triphosphate tripolyhydrolase [c] : dgtp + h2o --> dgsn + pppi (DGTPTRIPHYDRO-RXN) NTPP9 Nucleoside triphosphate pyrophosphorylase (itp) [c] : h2o + itp --> h + imp + ppi NTPP8 Nucleoside triphosphate pyrophosphorylase (utp) [c] : h2o + utp --> h + ppi + ump NTPP7 Nucleoside triphosphate pyrophosphorylase (dttp) [c] : dttp + h2o --> dtmp + h + ppi (RXN0-5107) ((RIGHT REMOVE PROTON)) NTPP6 Nucleoside triphosphate pyrophosphorylase (atp) [c] : atp + h2o --> amp + h + ppi (ATP-PYROPHOSPHATASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) NTPP5 Nucleoside triphosphate pyrophosphorylase (datp) [c] : datp + h2o --> damp + h + ppi (RXN0-384) ((RIGHT REMOVE PROTON)) NTPP4 Nucleoside triphosphate pyrophosphorylase (ctp) [c] : ctp + h2o --> cmp + h + ppi (RXN0-383) ((RIGHT REMOVE PROTON)) NTPP3 Nucleoside triphosphate pyrophosphorylase (dctp) [c] : dctp + h2o --> dcmp + h + ppi (DCTP-PYROPHOSPHATASE-RXN) ((RIGHT REMOVE PROTON)) NTPP2 Nucleoside triphosphate pyrophosphorylase (gtp) [c] : gtp + h2o --> gmp + h + ppi NTPP11 Nucleoside triphosphate pyrophosphorylase (xtp) [c] : h2o + xtp --> h + ppi + xmp (RXN0-1603) ((RIGHT REMOVE PROTON)) NTPP10 Nucleoside triphosphate pyrophosphorylase (ditp) [c] : ditp + h2o --> dimp + h + ppi (RXN0-1602) ((RIGHT REMOVE PROTON)) NTPP1 Nucleoside triphosphate pyrophosphorylase (dgtp) [c] : dgtp + h2o --> dgmp + h + ppi (RXN0-385) ((RIGHT REMOVE PROTON)) NTP5 nucleoside-triphosphatase (CTP) [c] : ctp + h2o --> cdp + h + pi NTP3pp nucleoside-triphosphatase (GTP) (periplasm) [p] : gtp + h2o --> gdp + h + pi NTP3 nucleoside-triphosphatase (GTP) [c] : gtp + h2o --> gdp + h + pi (RXN0-1021) ((RIGHT REMOVE PROTON)) NTP12 nucleoside-triphosphatase (XTP) [c] : h2o + xtp --> h + pi + xdp (RXN0-5074) ((RIGHT REMOVE PROTON)) NTP11 nucleoside-triphosphatase (dITP) [c] : ditp + h2o --> didp + h + pi NTP10 nucleoside-triphosphatase (ITP) [c] : h2o + itp --> h + idp + pi (RXN0-5073) ((RIGHT REMOVE PROTON)) NTP1 nucleoside-triphosphatase (ATP) [c] : atp + h2o --> adp + h + pi (RXN0-1061 3.6.3.1-RXN 3.6.3.15-RXN 3.6.3.46-RXN 3.6.3.49-RXN 3.6.3.50-RXN 3.6.3.51-RXN 3.6.3.52-RXN 3.6.4.1-RXN 3.6.4.2-RXN 3.6.4.3-RXN 3.6.4.4-RXN 3.6.4.5-RXN 3.6.4.6-RXN 3.6.4.7-RXN 3.6.4.8-RXN 3.6.4.9-RXN 3.6.4.11-RXN ADENOSINETRIPHOSPHATASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) NTD9pp 5'-nucleotidase (GMP) [p] : gmp + h2o --> gsn + pi NTD9 5'-nucleotidase (GMP) [c] : gmp + h2o --> gsn + pi (|5'-NUCLEOTID-RXN|) (:EXPANDED-RXN-MATCH) NTD8pp 5'-nucleotidase (dGMP) [p] : dgmp + h2o --> dgsn + pi NTD8 5'-nucleotidase (dGMP) [c] : dgmp + h2o --> dgsn + pi (NUCLEOTIDASE-RXN) (:METACYC :EXPANDED-RXN-MATCH) NTD7pp 5'-nucleotidase (AMP) [p] : amp + h2o --> adn + pi NTD7 5'-nucleotidase (AMP) [c] : amp + h2o --> adn + pi (|5'-NUCLEOTID-RXN|) (:EXPANDED-RXN-MATCH) NTD6pp 5'-nucleotidase (dAMP) [p] : damp + h2o --> dad-2 + pi NTD6 5'-nucleotidase (dAMP) [c] : damp + h2o --> dad-2 + pi (NUCLEOTIDASE-RXN) (:METACYC :EXPANDED-RXN-MATCH) NTD5pp 5'-nucleotidase (dTMP) [p] : dtmp + h2o --> pi + thymd NTD5 5'-nucleotidase (dTMP) [c] : dtmp + h2o --> pi + thymd (|THYMIDYLATE-5'-PHOSPHATASE-RXN|) (:METACYC) NTD4pp 5'-nucleotidase (CMP) [p] : cmp + h2o --> cytd + pi NTD4 5'-nucleotidase (CMP) [c] : cmp + h2o --> cytd + pi (|5'-NUCLEOTID-RXN|) (:EXPANDED-RXN-MATCH) NTD3pp 5'-nucleotidase (dCMP) [p] : dcmp + h2o --> dcyt + pi NTD3 5'-nucleotidase (dCMP) [c] : dcmp + h2o --> dcyt + pi (NUCLEOTIDASE-RXN) (:METACYC :EXPANDED-RXN-MATCH) NTD2pp 5'-nucleotidase (UMP) [p] : h2o + ump --> pi + uri NTD2 5'-nucleotidase (UMP) [c] : h2o + ump --> pi + uri (|5'-NUCLEOTID-RXN|) (:EXPANDED-RXN-MATCH) NTD1pp 5'-nucleotidase (dUMP) [p] : dump + h2o --> duri + pi NTD12pp 5'-nucleotidase (dIMP) (periplasm) [p] : dimp + h2o --> din + pi NTD12 5'-nucleotidase (dIMP) [c] : dimp + h2o --> din + pi NTD11pp 5'-nucleotidase (IMP) [p] : h2o + imp --> ins + pi NTD11 5'-nucleotidase (IMP) [c] : h2o + imp --> ins + pi (|5'-NUCLEOTID-RXN|) (:EXPANDED-RXN-MATCH) NTD10pp 5'-nucleotidase (XMP) [p] : h2o + xmp --> pi + xtsn NTD10 5'-nucleotidase (XMP) [c] : h2o + xmp --> pi + xtsn (XMPXAN-RXN) (:METACYC) NTD1 5'-nucleotidase (dUMP) [c] : dump + h2o --> duri + pi (NUCLEOTIDASE-RXN) (:METACYC :EXPANDED-RXN-MATCH) NPHS naphthoate synthase [c] : sbzcoa --> coa + dhna (NAPHTHOATE-SYN-RXN) NOtpp NO transport (diffusion) no[p] <==> no[c] (:EXCHANGE) NOtex nitric oxide transport via diffusion (extracellular to periplasm) no[e] <==> no[p] (:EXCHANGE) NODOy nitric oxide dioxygenase [c] : nadph + (2) no + (2) o2 --> h + nadp + (2) no3 (R621-RXN) (:EXPANDED-RXN-MATCH) NODOx nitric oxide dioxygenase [c] : nadh + (2) no + (2) o2 --> h + nad + (2) no3 (R621-RXN) (:EXPANDED-RXN-MATCH) NO3tex nitrate transport via diffusion (extracellular to periplasm) no3[e] <==> no3[p] (:EXCHANGE) NO3t7pp nitrate transport in via nitrite antiport (periplasm) no2[c] + no3[p] --> no2[p] + no3[c] NO3R2pp Nitrate reductase (Menaquinol-8) (periplasm) (2) h[c] + mql8[c] + no3[c] --> (2) h[p] + h2o[c] + mqn8[c] + no2[c] (RXN0-3501) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) NO3R2bpp Nitrate reductase (Menaquinol-8) (periplasm) mql8[c] + no3[p] --> h2o[p] + mqn8[c] + no2[p] NO3R1pp Nitrate reductase (Ubiquinol-8) (periplasm) (2) h[c] + no3[c] + q8h2[c] --> (2) h[p] + h2o[c] + no2[c] + q8[c] NO3R1bpp Nitrate reductase (Ubiquinol-8) no3[p] + q8h2[c] --> h2o[p] + no2[p] + q8[c] NO2tex nitrite transport via diffusion (extracellular to periplasm) no2[e] <==> no2[p] (:EXCHANGE) NO2t2rpp nitrite transport in via proton symport, reversible (periplasm) h[p] + no2[p] <==> h[c] + no2[c] (TRANS-RXN-137) NNDPR nicotinate-nucleotide diphosphorylase (carboxylating) [c] : (2) h + prpp + quln --> co2 + nicrnt + ppi (QUINOPRIBOTRANS-RXN) ((LEFT REMOVE PROTON)) NNDMBRT Nicotinate-nucleotide dimethylbenzimidazole phosphoribosyltransferase [c] : dmbzid + nicrnt --> 5prdmbz + h + nac (DMBPPRIBOSYLTRANS-RXN) ((RIGHT REMOVE PROTON)) NNATr nicotinate-nucleotide adenylyltransferase [c] : atp + h + nicrnt <==> dnad + ppi (NICONUCADENYLYLTRAN-RXN) ((LEFT REMOVE PROTON)) NNAM nicotinamidase [c] : h2o + ncam --> nac + nh4 (NICOTINAMID-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) NMNtex NMN transport via diffusion (extracellular to periplasm) nmn[e] <==> nmn[p] (:EXCHANGE) NMNt7pp NMN transport via NMN glycohydrolase (periplasm) h2o[c] + nmn[p] --> h[c] + ncam[c] + r5p[c] NMNPtpp NMN permease (periplasm) nmn[p] --> nmn[c] (TRANS-RXN-9) NMNN NMN nucleosidase [c] : h2o + nmn --> h + ncam + r5p (NMNNUCLEOSID-RXN) ((RIGHT REMOVE PROTON)) NMNDA nicotinamide-nucleotide amidase [c] : h2o + nmn --> nh4 + nicrnt (NMNAMIDOHYDRO-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) NMNAT nicotinamide-nucleotide adenylyltransferase [c] : atp + h + nmn --> nad + ppi (2.7.7.1-RXN) ((LEFT REMOVE PROTON)) NI2uabcpp nickel transport via ABC system (uptake, periplasm) atp[c] + h2o[c] + ni2[p] --> adp[c] + h[c] + ni2[c] + pi[c] (ABC-20-RXN) ((RIGHT REMOVE PROTON)) NI2tpp nickel transport in/out via permease (no H+) ni2[p] <==> ni2[c] (TRANS-RXN-141B) NI2tex nickel transport via diffusion (extracellular to periplasm) ni2[e] <==> ni2[p] (:EXCHANGE) NI2abcpp Nickle (Ni+2) ABC transporter (periplasm) atp[c] + h2o[c] + ni2[c] --> adp[c] + h[c] + ni2[p] + pi[c] NHFRBO NADH:flavorubredoxin oxidoreductase [c] : h + nadh + (2) no --> h2o + n2o + nad NH4tpp ammonia reversible transport (periplasm) nh4[p] <==> nh4[c] (TRANS-RXN-149) ((LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) NH4tex ammonia transport via diffusion (extracellular to periplasm) nh4[e] <==> nh4[p] (:EXCHANGE) NDPK8 nucleoside-diphosphate kinase (ATP:dADP) [c] : atp + dadp <==> adp + datp (DADPKIN-RXN) NDPK7 nucleoside-diphosphate kinase (ATP:dCDP) [c] : atp + dcdp <==> adp + dctp (DCDPKIN-RXN) NDPK6 nucleoside-diphosphate kinase (ATP:dUDP) [c] : atp + dudp <==> adp + dutp (DUDPKIN-RXN) NDPK5 nucleoside-diphosphate kinase (ATP:dGDP) [c] : atp + dgdp <==> adp + dgtp (DGDPKIN-RXN) NDPK4 nucleoside-diphosphate kinase (ATP:dTDP) [c] : atp + dtdp <==> adp + dttp (DTDPKIN-RXN) NDPK3 nucleoside-diphosphate kinase (ATP:CDP) [c] : atp + cdp <==> adp + ctp (CDPKIN-RXN) NDPK2 nucleoside-diphosphate kinase (ATP:UDP) [c] : atp + udp <==> adp + utp (UDPKIN-RXN) NDPK1 nucleoside-diphosphate kinase (ATP:GDP) [c] : atp + gdp <==> adp + gtp (GDPKIN-RXN) NAtex sodium transport via diffusion (extracellular to periplasm) na1[e] <==> na1[p] (:EXCHANGE) NAt3_2pp sodium proton antiporter (H:NA is 2) (periplasm) (2) h[p] + na1[c] --> (2) h[c] + na1[p] (TRANS-RXN-129 TRANS-RXN-101 TRANS-RXN-130) NAt3_1pp sodium proton antiporter (H:NA is 1:1) (periplasm) h[p] + na1[c] <==> h[c] + na1[p] (TRANS-RXN-129 TRANS-RXN-101 TRANS-RXN-130) NAt3_1.5pp sodium proton antiporter (H:NA is 1.5) (periplasm) (3) h[p] + (2) na1[c] --> (3) h[c] + (2) na1[p] (TRANS-RXN-129 TRANS-RXN-101 TRANS-RXN-130) NAMNPP nicotinic acid mononucleotide pyrophosphorylase [c] : atp + h2o + nac + prpp --> adp + nicrnt + pi + ppi NADTRHD NAD transhydrogenase [c] : nad + nadph --> nadh + nadp (1.6.1.2-RXN PYRNUTRANSHYDROGEN-RXN) NADS1 NAD synthase (nh3) [c] : atp + dnad + nh4 --> amp + h + nad + ppi (NAD-SYNTH-NH3-RXN) ((LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT REMOVE PROTON)) NADPPPS NADP phosphatase [c] : h2o + nadp --> nad + pi (NADPPHOSPHAT-RXN) NADPHQR4 NADPH Quinone Reductase (2-Demethylmenaquinone-8) [c] : 2dmmq8 + h + nadph --> 2dmmql8 + nadp NADPHQR3 NADPH Quinone Reductase (Menaquinone-8) [c] : h + mqn8 + nadph --> mql8 + nadp (NQOR-RXN) (:EXPANDED-RXN-MATCH) NADPHQR2 NADPH Quinone Reductase (Ubiquinone-8) [c] : h + nadph + q8 --> nadp + q8h2 NADN NAD nucleosidase [c] : h2o + nad --> adprib + h + ncam (NADNUCLEOSID-RXN) ((RIGHT REMOVE PROTON)) NADK NAD kinase [c] : atp + nad --> adp + h + nadp (NAD-KIN-RXN) ((RIGHT REMOVE PROTON)) NADH9 NADH dehydrogenase (demethylmenaquinone-8 & 0 protons) [c] : 2dmmq8 + h + nadh --> 2dmmql8 + nad NADH5 NADH dehydrogenase (ubiquinone-8 ) [c] : h + nadh + q8 --> nad + q8h2 (NADH-DEHYDROG-A-RXN) ((LEFT REMOVE PROTON)) NADH15pp NADH dehydrogenase (demethylmenaquinone-8 & 4 protons) (periplasm) 2dmmq8[c] + (5) h[c] + nadh[c] --> 2dmmql8[c] + (4) h[p] + nad[c] NADH14pp NADH dehydrogenase (menaquinone-8 & 4 protons) (periplasm) (5) h[c] + mqn8[c] + nadh[c] --> (4) h[p] + mql8[c] + nad[c] (NQOR-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) NADH13pp NADH dehydrogenase (ubiquinone-8 & 4 protons) (periplasm) (5) h[c] + nadh[c] + q8[c] --> (4) h[p] + nad[c] + q8h2[c] (NADH-DEHYDROG-A-RXN) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) NADH10 NADH dehydrogenase (menaquinone-8 & 0 protons) [c] : h + mqn8 + nadh --> mql8 + nad (NQOR-RXN) (:EXPANDED-RXN-MATCH) NADDP NAD diphosphatase [c] : h2o + nad --> amp + (2) h + nmn (NADPYROPHOSPHAT-RXN) ((RIGHT REMOVE PROTON)) NACtpp Nicotinic acid uptake (periplasm) nac[p] --> nac[c] (:EXCHANGE) NACtex Nicotinic acid transport via diffusion (extracellular to periplasm) nac[e] <==> nac[p] (:EXCHANGE) NACODA N-acetylornithine deacetylase [c] : acg5sa + h2o --> ac + glu5sa N2Otpp nitrious oxide transport (diffusion) n2o[p] <==> n2o[c] (:EXCHANGE) N2Otex nitrious oxide transport via diffusion (extracellular to periplasm) n2o[e] <==> n2o[p] (:EXCHANGE) MTRPOX N-methyltryptophan oxidase [c] : Nmtrp + h2o + o2 --> fald + h2o2 + trp-L (RXN0-301) MTRK 5-methylthioribose kinase [c] : 5mtr + atp --> 5mdr1p + adp + h (5-METHYLTHIORIBOSE-KINASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) MTRI 5-methylthioribose-1-phosphate isomerase [c] : 5mdr1p <==> 5mdru1p (5.3.1.23-RXN) (:METACYC) MTHFR2 5,10-methylenetetrahydrofolate reductase (NADH) [c] : (2) h + mlthf + nadh --> 5mthf + nad (1.5.1.20-RXN) (:EXPANDED-RXN-MATCH) MTHFD methylenetetrahydrofolate dehydrogenase (NADP) [c] : mlthf + nadp <==> methf + nadph (METHYLENETHFDEHYDROG-NADP-RXN) MTHFC methenyltetrahydrofolate cyclohydrolase [c] : h2o + methf <==> 10fthf + h (METHENYLTHFCYCLOHYDRO-RXN) ((RIGHT REMOVE PROTON)) MTAN methylthioadenosine nucleosidase [c] : 5mta + h2o --> 5mtr + ade (METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN) (:METACYC) MSO3tex methanesulfonate transport via diffusion (extracellular to periplasm) mso3[e] <==> mso3[p] (:EXCHANGE) MSO3abcpp methanesulfonate transport via ABC system (periplasm) atp[c] + h2o[c] + mso3[p] --> adp[c] + h[c] + mso3[c] + pi[c] MPTG2 murein polymerizing transglycosylase 2 (three linked units) murein5p5p[p] + uaagmda[c] --> h[c] + murein5p5p5p[p] + udcpdp[c] (:UNMAPPED-CPDS) MPTG murein polymerizing transglycosylase (2) uaagmda[c] --> (2) h[c] + murein5p5p[p] + (2) udcpdp[c] (:UNMAPPED-CPDS) MOHMT 3-methyl-2-oxobutanoate hydroxymethyltransferase [c] : 3mob + h2o + mlthf --> 2dhp + thf (3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN) MOBDtex molybdate transport via diffusion (extracellular to periplasm) mobd[e] <==> mobd[p] (:EXCHANGE) MOBDabcpp molybdate transport via ABC system (periplasm) atp[c] + h2o[c] + mobd[p] --> adp[c] + h[c] + mobd[c] + pi[c] (ABC-19-RXN) ((RIGHT REMOVE PROTON)) MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) [c] : ckdo + phphhlipa --> cmp + h + kphphhlipa (:UNMAPPED-CPDS) MOAT2 3-deoxy-D-manno-octulosonic acid transferase [c] : ckdo + kdolipid4 --> cmp + h + kdo2lipid4 (KDOTRANS2-RXN) ((RIGHT REMOVE PROTON)) MOAT 3-deoxy-D-manno-octulosonic acid transferase [c] : ckdo + lipidA --> cmp + h + kdolipid4 (KDOTRANS-RXN) ((RIGHT REMOVE PROTON)) MNtex Manganese (Mn+2) transport via diffusion (extracellular to periplasm) mn2[e] <==> mn2[p] (:EXCHANGE) MNt2pp manganese (Mn+2) transport in via proton symport (periplasm) h[p] + mn2[p] --> h[c] + mn2[c] (TRANS-RXN-241) MNNH D-mannonate hydrolyase [c] : mana --> 2ddglcn + h2o (MANNONDEHYDRAT-RXN) MNLtex mannitol transport via diffusion (extracellular to periplasm) mnl[e] <==> mnl[p] (:EXCHANGE) MNLptspp mannitol transport via PEP:Pyr PTS (periplasm) mnl[p] + pep[c] --> mnl1p[c] + pyr[c] (TRANS-RXN-156) MN6PP mannose 6-phosphate phosphatase [c] : h2o + man6p --> man + pi (SUGAR-PHOSPHATASE-RXN) (:EXPANDED-RXN-MATCH) MN2tpp manganese transport in/out via permease (no H+) mn2[p] <==> mn2[c] (:EXCHANGE) MMM2 Methylmalonyl-CoA mutase [c] : succoa --> mmcoa-R (METHYLMALONYL-COA-MUT-RXN) MMETtex S-methyl-L-methionine transport via diffusion (extracellular to periplasm) mmet[e] <==> mmet[p] (:EXCHANGE) MMETt2pp S-methylmethionine permease (periplasm) h[p] + mmet[p] --> h[c] + mmet[c] MME methylmalonyl-CoA epimerase [c] : mmcoa-R <==> mmcoa-S (METHYLMALONYL-COA-EPIM-RXN) MMCD Methylmalonyl-CoA decarboxylase [c] : h + mmcoa-S --> co2 + ppcoa (METHYLMALONYL-COA-DECARBOXYLASE-RXN) (:METACYC (LEFT REMOVE PROTON)) MLTP3 Maltodextrin phosphorylase (maltoheptaose) [c] : malthp + pi <==> g1p + malthx MLTP2 Maltodextrin phosphorylase (maltohexaose) [c] : malthx + pi <==> g1p + maltpt MLTP1 Maltodextrin phosphorylase (maltopentaose) [c] : maltpt + pi <==> g1p + maltttr MLTGY4pp murein lytic transglycosylase (murein4px4p4p) (periplasm) [p] : murein4px4p4p --> anhgm4p + murein4px4p (:UNMAPPED-CPDS) MLTGY3pp murein lytic transglycosylase (murein3p3p) (periplasm) [p] : murein3p3p --> (2) anhgm3p (:UNMAPPED-CPDS) MLTGY2pp murein lytic transglycosylase (murein4p3p) (periplasm) [p] : murein4p3p --> anhgm3p + anhgm4p (:UNMAPPED-CPDS) MLTGY1pp murein lytic transglycosylase (murein4p4p) (periplasm) [p] : murein4p4p --> (2) anhgm4p (:UNMAPPED-CPDS) MLTG5 Maltodextrin glucosidase (maltoheptaose) [c] : h2o + malthp --> glc-D + malthx MLTG4 Maltodextrin glucosidase (maltohexaose) [c] : h2o + malthx --> glc-D + maltpt MLTG3 Maltodextrin glucosidase (maltopentaose) [c] : h2o + maltpt --> glc-D + maltttr MLTG2 Maltodextrin glucosidase (maltotetraose) [c] : h2o + maltttr --> glc-D + malttr (MALTET-RXN) MLTG1 Maltodextrin glucosidase (maltotriose) [c] : h2o + malttr --> glc-D + malt MLDEP2pp murein L,D-endopeptidase (murein5px3p) (periplasm) [p] : h2o + murein5px3p --> murein5p3p (:UNMAPPED-CPDS) MLDEP1pp murein L,D-endopeptidase (murein3px3p) (periplasm) [p] : h2o + murein3px3p --> murein3p3p (:UNMAPPED-CPDS) MLDCP3App murein L,D-carboxypeptidase (murein5px3p) (periplasm) [p] : h2o + murein5px3p --> alaala + murein3px3p (:UNMAPPED-CPDS) MLDCP2Bpp murein L,D-carboxypeptidase (murein4p3p) (periplasm) [p] : h2o + murein4p3p --> ala-D + murein3p3p (:UNMAPPED-CPDS) MLDCP2App murein L,D-carboxypeptidase (murein5p5p) (periplasm) [p] : h2o + murein5p5p --> alaala + murein5p3p (:UNMAPPED-CPDS) MLDCP1Bpp murein L,D-carboxypeptidase (murein4p4p) (periplasm) [p] : h2o + murein4p4p --> ala-D + murein4p3p (:UNMAPPED-CPDS) MLDCP1App murein L,D-carboxypeptidase (murein5px4p) (periplasm) [p] : h2o + murein5px4p --> alaala + murein3px4p (:UNMAPPED-CPDS) MINOHPtexi myo-inositol phosphate transport via diffusion (extracellular to periplasm) minohp[e] --> minohp[p] (:EXCHANGE) MICITD 2-methylisocitrate dehydratase [c] : 2mcacn + h2o --> micit (4.2.1.99-RXN) MI1PP myo-inositol 1-phosphatase [c] : h2o + mi1p-D --> inost + pi (RXN-7252) (:METACYC) MGSA methylglyoxal synthase [c] : dhap --> mthgxl + pi (METHGLYSYN-RXN) MG2uabcpp Magnesium (Mg+2) ABC transporter (ubtake, periplasm) atp[c] + h2o[c] + mg2[p] --> adp[c] + h[c] + mg2[c] + pi[c] (TRANS-RXN-250) ((RIGHT REMOVE PROTON)) MG2tpp magnesium transport via diffusion mg2[p] <==> mg2[c] (TRANS-RXN-141) MG2tex magnesium (Mg+2) transport via diffusion (extracellular to periplasm) mg2[e] <==> mg2[p] (:EXCHANGE) METtex L-methionine transport via diffusion (extracellular to periplasm) met-L[e] <==> met-L[p] (:EXCHANGE) METabcpp L-methionine transport via ABC system (periplasm) atp[c] + h2o[c] + met-L[p] --> adp[c] + h[c] + met-L[c] + pi[c] (RXN0-4522) ((RIGHT REMOVE PROTON)) METTRS Methionyl-tRNA synthetase [c] : atp + met-L + trnamet --> amp + mettrna + ppi (METHIONINE--TRNA-LIGASE-RXN) METSOXR2 L-methionine-R-sulfoxide reductase [c] : metsox-R-L + trdrd --> h2o + met-L + trdox (:UNMAPPED-CPDS) METSOXR1 L-methionine-S-oxide reductase [c] : metsox-S-L + trdrd --> h2o + met-L + trdox (METHIONINE-S-OXIDE-REDUCTASE-RXN) (:EXPANDED-RXN-MATCH) METSOX2tex L-methionine R-oxide diffusion (extracellular) metsox-R-L[e] <==> metsox-R-L[p] (:UNMAPPED-CPDS) METSOX2abcpp L-methionine R-oxide transport via ABC system (periplasm) atp[c] + h2o[c] + metsox-R-L[p] --> adp[c] + h[c] + metsox-R-L[c] + pi[c] (:UNMAPPED-CPDS) METSOX1tex L-methionine S-oxide diffusion (extracellular) metsox-S-L[e] <==> metsox-S-L[p] (:EXCHANGE) METSOX1abcpp L-methionine S-oxide transport via ABC system (periplasm) atp[c] + h2o[c] + metsox-S-L[p] --> adp[c] + h[c] + metsox-S-L[c] + pi[c] METS methionine synthase [c] : 5mthf + hcys-L --> h + met-L + thf (HOMOCYSMETB12-RXN) ((RIGHT REMOVE PROTON)) METOX2s methionine spontaneous oxidation 2 [c] : h2o2 + met-L --> h2o + metsox-R-L (:UNMAPPED-CPDS) METOX1s methionine spontaneous oxidation [c] : h2o2 + met-L --> h2o + metsox-S-L METDtex D-methionine transport via diffusion (extracellular to periplasm) met-D[e] <==> met-D[p] (:EXCHANGE) METDabcpp D-methionine transport via ABC system (periplasm) atp[c] + h2o[c] + met-D[p] --> adp[c] + h[c] + met-D[c] + pi[c] (TRANS-RXN0-202) ((RIGHT REMOVE PROTON)) METAT methionine adenosyltransferase [c] : atp + h2o + met-L --> amet + pi + ppi (S-ADENMETSYN-RXN) MEPCT 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [c] : 2me4p + ctp + h --> 4c2me + ppi (2.7.7.60-RXN) ((LEFT REMOVE PROTON)) MELIBtex melibiose transport via diffusion (extracellular to periplasm) melib[e] <==> melib[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) MELIBt3ipp melibiose transport in via antiport (periplasm) h[p] + melib[c] --> h[c] + melib[p] MELIBt2pp melibiose transport in via symport (periplasm) h[p] + melib[p] --> h[c] + melib[c] (TRANS-RXN-94) MECDPS 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [c] : 2p4c2me --> 2mecdp + cmp (RXN0-302) MECDPDH2 2C-methyl-D-erythritol 2,4 cyclodiphosphate dehydratase [c] : 2mecdp + nadh --> h2mb4p + h2o + nad ME2 malic enzyme (NADP) [c] : mal-L + nadp --> co2 + nadph + pyr (MALIC-NADP-RXN) ME1 malic enzyme (NAD) [c] : mal-L + nad --> co2 + nadh + pyr (MALIC-NAD-RXN) MDRPD 5-Methylthio-5-deoxy-D-ribulose 1-phosphate dehydratase [c] : 5mdru1p --> dkmpp + h2o (R145-RXN) (:METACYC) MDH3 Malate dehydrogenase (menaquinone 8 as acceptor) [c] : mal-L + mqn8 --> mql8 + oaa (RXNI-3) (:METACYC) MDH2 Malate dehydrogenase (ubiquinone 8 as acceptor) [c] : mal-L + q8 --> oaa + q8h2 MDH malate dehydrogenase [c] : mal-L + nad <==> h + nadh + oaa (MALATE-DEH-RXN) ((RIGHT REMOVE PROTON)) MDDEP4pp murein D,D-endopeptidase (murein4px4px4p) (periplasm) [p] : h2o + murein4px4px4p --> murein4px4p4p (:UNMAPPED-CPDS) MDDEP3pp murein D,D-endopeptidase (murein5px4p) (periplasm) [p] : h2o + murein5px4p --> murein5p4p (:UNMAPPED-CPDS) MDDEP2pp murein D,D-endopeptidase (murein3px4p) (periplasm) [p] : h2o + murein3px4p --> murein4p3p (:UNMAPPED-CPDS) MDDEP1pp murein D,D-endopeptidase (murein4px4p) (periplasm) [p] : h2o + murein4px4p --> murein4p4p (:UNMAPPED-CPDS) MDDCP5pp murein D,D-carboxypeptidase (murein5p3p) (periplasm) [p] : h2o + murein5p3p --> ala-D + murein4p3p (:UNMAPPED-CPDS) MDDCP4pp murein D,D-carboxypeptidase (murein5p4p) (periplasm) [p] : h2o + murein5p4p --> ala-D + murein4p4p (:UNMAPPED-CPDS) MDDCP3pp murein D,D-carboxypeptidase (murein5p5p) (periplasm) [p] : h2o + murein5p5p --> ala-D + murein5p4p (:UNMAPPED-CPDS) MDDCP2pp murein D,D-carboxypeptidase (murein5px4px4p) (periplasm) [p] : h2o + murein5px4px4p --> ala-D + murein4px4px4p (:UNMAPPED-CPDS) MDDCP1pp murein D,D-carboxypeptidase (murein5px4p) (periplasm) [p] : h2o + murein5px4p --> ala-D + murein4px4p (:UNMAPPED-CPDS) MCTP2App murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm) [p] : murein5p5p5p --> (2) ala-D + murein5px4px4p (:UNMAPPED-CPDS) MCTP1Bpp murein crosslinking transpeptidase 1B:(A2pm->A2pm) (periplasm) [p] : murein5p5p --> alaala + murein5px3p (:UNMAPPED-CPDS) MCTP1App murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm) [p] : murein5p5p --> ala-D + murein5px4p (:UNMAPPED-CPDS) MCPST 3-mercaptopyruvate sulfurtransferase [c] : cyan + mercppyr --> h + pyr + tcynt (MERCAPYSTRANS-RXN) ((RIGHT REMOVE PROTON)) MCOATA Malonyl-CoA-ACP transacylase [c] : ACP + malcoa <==> coa + malACP (MALONYL-COA-ACP-TRANSACYL-RXN) MCITS 2-methylcitrate synthase [c] : h2o + oaa + ppcoa --> 2mcit + coa + h (2-METHYLCITRATE-SYNTHASE-RXN) ((RIGHT REMOVE PROTON)) MCITL2 methylisocitrate lyase [c] : micit <==> pyr + succ (METHYLISOCITRATE-LYASE-RXN) MCITD 2-methylcitrate dehydratase [c] : 2mcit --> 2mcacn + h2o (2-METHYLCITRATE-DEHYDRATASE-RXN) MANtex D-mannose transport via diffusion (extracellular to periplasm) man[e] <==> man[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) MANptspp D-mannose transport via PEP:Pyr PTS (periplasm) man[p] + pep[c] --> man6p[c] + pyr[c] (TRANS-RXN-165) MANPGH 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase [c] : h2o + man6pglyc --> glyc-R + man6p (:UNMAPPED-CPDS) MANGLYCtex 2-O-alpha-mannosyl-D-glycerate transport via diffusion (extracellular to periplasm) manglyc[e] <==> manglyc[p] (:EXCHANGE) MANGLYCptspp 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm) manglyc[p] + pep[c] --> man6pglyc[c] + pyr[c] (:UNMAPPED-CPDS) MANAO Mannonate oxidoreductase [c] : mana + nad <==> fruur + h + nadh (MANNONOXIDOREDUCT-RXN) ((RIGHT REMOVE PROTON)) MAN6Ptex Mannose 6-phosphate transport via diffusion (extracellular to periplasm) man6p[e] <==> man6p[p] (:EXCHANGE) MAN6Pt6_2pp Mannose-6-phosphate transport via phosphate antiport (periplasm) man6p[p] + (2) pi[c] --> man6p[c] + (2) pi[p] MAN6PI mannose-6-phosphate isomerase [c] : man6p <==> f6p (MANNPISOM-RXN) MAN1PT2 mannose-1-phosphate guanylyltransferase (GDP) [c] : gdp + h + man1p --> gdpmann + pi (MANNPGUANYLTRANGDP-RXN) ((LEFT REMOVE PROTON)) MALtex Malate transport via diffusion (extracellular to periplasm) mal-L[e] <==> mal-L[p] (:EXCHANGE) MALt2_3pp Malate transport via proton symport (3 H) (periplasm) (3) h[p] + mal-L[p] --> (3) h[c] + mal-L[c] MALt2_2pp Malate transport via proton symport (2 H) (periplasm) (2) h[p] + mal-L[p] --> (2) h[c] + mal-L[c] MALTtexi maltoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible malt[e] --> malt[p] (RXN0-1741) MALTptspp maltose transport via PEP:Pyr PTS (periplasm) malt[p] + pep[c] --> malt6p[c] + pyr[c] MALTabcpp maltose transport via ABC system (periplasm) atp[c] + h2o[c] + malt[p] --> adp[c] + h[c] + malt[c] + pi[c] (ABC-16-RXN) ((RIGHT REMOVE PROTON)) MALTTTRtexi maltotetraoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible maltttr[e] --> maltttr[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) MALTTTRabcpp maltotetraose transport via ABC system (periplasm) atp[c] + h2o[c] + maltttr[p] --> adp[c] + h[c] + maltttr[c] + pi[c] MALTTRtexi Maltotriose transport via diffusion (extracellular to periplasm) irreversible malttr[e] --> malttr[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) MALTTRabcpp Maltotriose transport via ABC system (periplasm) atp[c] + h2o[c] + malttr[p] --> adp[c] + h[c] + malttr[c] + pi[c] MALTPTtexi maltopentaoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible maltpt[e] --> maltpt[p] (:EXCHANGE) MALTPTabcpp maltopentaose transport via ABC system (periplasm) atp[c] + h2o[c] + maltpt[p] --> adp[c] + h[c] + maltpt[c] + pi[c] MALTHXtexi maltohexaose transport via diffusion (extracellular to periplasm) irreversible malthx[e] --> malthx[p] (:EXCHANGE) MALTHXabcpp maltohexaose transport via ABC system (periplasm) atp[c] + h2o[c] + malthx[p] --> adp[c] + h[c] + malthx[c] + pi[c] MALTATr maltose O-acetyltransferase [c] : accoa + malt <==> acmalt + coa (MALTACETYLTRAN-RXN) MALS malate synthase [c] : accoa + glx + h2o --> coa + h + mal-L (MALSYN-RXN) ((RIGHT REMOVE PROTON)) MACPD Malonyl-ACP decarboxylase [c] : h + malACP --> acACP + co2 (MALONYL-ACPDECARBOX-RXN) ((LEFT REMOVE PROTON)) M1PD mannitol-1-phosphate 5-dehydrogenase [c] : mnl1p + nad <==> f6p + h + nadh (MANNPDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) LYXtex L-Lyxose transport via diffusion (extracellular to periplasm) lyx-L[e] <==> lyx-L[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) LYXt2pp L-Lyxose transport via proton symport (periplasm) h[p] + lyx-L[p] --> h[c] + lyx-L[c] LYXI Lyxose isomerase [c] : lyx-L --> xylu-L (LYXISOM-RXN) LYStex L-lysine transport via diffusion (extracellular to periplasm) lys-L[e] <==> lys-L[p] (:EXCHANGE) LYSt2rpp L-lysine reversible transport via proton symport (periplasm) h[p] + lys-L[p] <==> h[c] + lys-L[c] (TRANS-RXN-58) LYSabcpp L-lysine transport via ABC system (periplasm) atp[c] + h2o[c] + lys-L[p] --> adp[c] + h[c] + lys-L[c] + pi[c] (ABC-3-RXN) ((RIGHT REMOVE PROTON)) LYSTRS Lysyl-tRNA synthetase [c] : atp + lys-L + trnalys --> amp + lystrna + ppi (LYSINE--TRNA-LIGASE-RXN) LYSDC lysine decarboxylase [c] : h + lys-L --> 15dap + co2 (LYSDECARBOX-RXN) ((LEFT REMOVE PROTON)) LSERDHr L-serine dehydrogenase [c] : nadp + ser-L <==> 2amsa + h + nadph (RXN0-2201) LPLIPAL2G181 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:1) [c] : 2agpg181 + h2o --> g3pg + h + ocdcea (:UNMAPPED-CPDS) LPLIPAL2G180 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C18:0) [c] : 2agpg180 + h2o --> g3pg + h + ocdca (:UNMAPPED-CPDS) LPLIPAL2G161 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:1) [c] : 2agpg161 + h2o --> g3pg + h + hdcea (:UNMAPPED-CPDS) LPLIPAL2G160 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C16:0) [c] : 2agpg160 + h2o --> g3pg + h + hdca (:UNMAPPED-CPDS) LPLIPAL2G141 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:1) [c] : 2agpg141 + h2o --> g3pg + h + ttdcea (:UNMAPPED-CPDS) LPLIPAL2G140 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C14:0) [c] : 2agpg140 + h2o --> g3pg + h + ttdca (:UNMAPPED-CPDS) LPLIPAL2G120 Lysophospholipase L2 (2-acylglycerophosphoglycerol, n-C12:0) [c] : 2agpg120 + h2o --> ddca + g3pg + h (:UNMAPPED-CPDS) LPLIPAL2E181 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:1) [c] : 2agpe181 + h2o --> g3pe + h + ocdcea (:UNMAPPED-CPDS) LPLIPAL2E180 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C18:0) [c] : 2agpe180 + h2o --> g3pe + h + ocdca (:UNMAPPED-CPDS) LPLIPAL2E161 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:1) [c] : 2agpe161 + h2o --> g3pe + h + hdcea (:UNMAPPED-CPDS) LPLIPAL2E160 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C16:0) [c] : 2agpe160 + h2o --> g3pe + h + hdca (:UNMAPPED-CPDS) LPLIPAL2E141 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:1) [c] : 2agpe141 + h2o --> g3pe + h + ttdcea (:UNMAPPED-CPDS) LPLIPAL2E140 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C14:0) [c] : 2agpe140 + h2o --> g3pe + h + ttdca (:UNMAPPED-CPDS) LPLIPAL2E120 Lysophospholipase L2 (2-acylglycerophosphoethanolamine, n-C12:0) [c] : 2agpe120 + h2o --> ddca + g3pe + h (:UNMAPPED-CPDS) LPLIPAL2ATG181 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C18:1) [c] : 2agpg181 + pg181 --> apg181 + g3pg (:UNMAPPED-CPDS) LPLIPAL2ATG180 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C18:0) [c] : 2agpg180 + pg180 --> apg180 + g3pg (:UNMAPPED-CPDS) LPLIPAL2ATG161 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:1) [c] : 2agpg161 + pg161 --> apg161 + g3pg (:UNMAPPED-CPDS) LPLIPAL2ATG160 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C16:0) [c] : 2agpg160 + pg160 --> apg160 + g3pg (:UNMAPPED-CPDS) LPLIPAL2ATG141 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C14:1) [c] : 2agpg141 + pg141 --> apg141 + g3pg (:UNMAPPED-CPDS) LPLIPAL2ATG140 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C14:0) [c] : 2agpg140 + pg140 --> apg140 + g3pg (:UNMAPPED-CPDS) LPLIPAL2ATG120 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoglycerol, n-C12:0) [c] : 2agpg120 + pg120 --> apg120 + g3pg (:UNMAPPED-CPDS) LPLIPAL2ATE181 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:1) [c] : 2agpe181 + pg181 --> apg181 + g3pe (:UNMAPPED-CPDS) LPLIPAL2ATE180 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C18:0) [c] : 2agpe180 + pg180 --> apg180 + g3pe (:UNMAPPED-CPDS) LPLIPAL2ATE161 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:1) [c] : 2agpe161 + pg161 --> apg161 + g3pe (:UNMAPPED-CPDS) LPLIPAL2ATE160 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C16:0) [c] : 2agpe160 + pg160 --> apg160 + g3pe (:UNMAPPED-CPDS) LPLIPAL2ATE141 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:1) [c] : 2agpe141 + pg141 --> apg141 + g3pe (:UNMAPPED-CPDS) LPLIPAL2ATE140 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C14:0) [c] : 2agpe140 + pg140 --> apg140 + g3pe (:UNMAPPED-CPDS) LPLIPAL2ATE120 Lysophospholipase L2 (acyltransferase, 2-acyl-glycerophosphoethanolamine, n-C12:0) [c] : 2agpe120 + pg120 --> apg120 + g3pe (:UNMAPPED-CPDS) LPLIPAL2A181 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:1) [c] : 2odec11eg3p + h2o --> glyc3p + h + ocdcea (:UNMAPPED-CPDS) LPLIPAL2A180 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C18:0) [c] : 2odecg3p + h2o --> glyc3p + h + ocdca (:UNMAPPED-CPDS) LPLIPAL2A161 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:1) [c] : 2hdec9eg3p + h2o --> glyc3p + h + hdcea (:UNMAPPED-CPDS) LPLIPAL2A160 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C16:0) [c] : 2hdecg3p + h2o --> glyc3p + h + hdca (:UNMAPPED-CPDS) LPLIPAL2A141 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:1) [c] : 2tdec7eg3p + h2o --> glyc3p + h + ttdcea (:UNMAPPED-CPDS) LPLIPAL2A140 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C14:0) [c] : 2tdecg3p + h2o --> glyc3p + h + ttdca (:UNMAPPED-CPDS) LPLIPAL2A120 Lysophospholipase L2 (2-acylglycerophosphotidate, n-C12:0) [c] : 2ddecg3p + h2o --> ddca + glyc3p + h (:UNMAPPED-CPDS) LPLIPAL1G181pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C18:1) (periplasm) [p] : 1agpg181 + h2o --> g3pg + h + ocdcea (:UNMAPPED-CPDS) LPLIPAL1G180pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C18:0) (periplasm) [p] : 1agpg180 + h2o --> g3pg + h + ocdca (:UNMAPPED-CPDS) LPLIPAL1G161pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C16:1) (periplasm) [p] : 1agpg161 + h2o --> g3pg + h + hdcea (:UNMAPPED-CPDS) LPLIPAL1G160pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C16:0) (periplasm) [p] : 1agpg160 + h2o --> g3pg + h + hdca (:UNMAPPED-CPDS) LPLIPAL1G141pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C14:1) (periplasm) [p] : 1agpg141 + h2o --> g3pg + h + ttdcea (:UNMAPPED-CPDS) LPLIPAL1G140pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C14:0) (periplasm) [p] : 1agpg140 + h2o --> g3pg + h + ttdca (:UNMAPPED-CPDS) LPLIPAL1G120pp Lysophospholipase L1 (2-acylglycerophosphoglycerol, n-C12:0) (periplasm) [p] : 1agpg120 + h2o --> ddca + g3pg + h (:UNMAPPED-CPDS) LPLIPAL1E181pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C18:1) (periplasm) [p] : 1agpe181 + h2o --> g3pe + h + ocdcea (:UNMAPPED-CPDS) LPLIPAL1E180pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C18:0) (periplasm) [p] : 1agpe180 + h2o --> g3pe + h + ocdca (:UNMAPPED-CPDS) LPLIPAL1E161pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C16:1) (periplasm) [p] : 1agpe161 + h2o --> g3pe + h + hdcea (:UNMAPPED-CPDS) LPLIPAL1E160pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C16:0) (periplasm) [p] : 1agpe160 + h2o --> g3pe + h + hdca (:UNMAPPED-CPDS) LPLIPAL1E141pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C14:1) (periplasm) [p] : 1agpe141 + h2o --> g3pe + h + ttdcea (:UNMAPPED-CPDS) LPLIPAL1E140pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C14:0) (periplasm) [p] : 1agpe140 + h2o --> g3pe + h + ttdca (:UNMAPPED-CPDS) LPLIPAL1E120pp Lysophospholipase L1 (2-acylglycerophosphoethanolamine, n-C12:0) (periplasm) [p] : 1agpe120 + h2o --> ddca + g3pe + h (:UNMAPPED-CPDS) LPLIPAL1A181pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:1) (periplasm) [p] : 1odec11eg3p + h2o --> glyc3p + h + ocdcea LPLIPAL1A180pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C18:0) (periplasm) [p] : 1odecg3p + h2o --> glyc3p + h + ocdca LPLIPAL1A161pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C16:1) (periplasm) [p] : 1hdec9eg3p + h2o --> glyc3p + h + hdcea LPLIPAL1A160pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C16:0) (periplasm) [p] : 1hdecg3p + h2o --> glyc3p + h + hdca LPLIPAL1A141pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C14:1) (periplasm) [p] : 1tdec7eg3p + h2o --> glyc3p + h + ttdcea (:UNMAPPED-CPDS) LPLIPAL1A140pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C14:0) (periplasm) [p] : 1tdecg3p + h2o --> glyc3p + h + ttdca (:UNMAPPED-CPDS) LPLIPAL1A120pp Lysophospholipase L1 (2-acylglycerophosphotidate, n-C12:0) (periplasm) [p] : 1ddecg3p + h2o --> ddca + glyc3p + h LPADSS Lipid A disaccaride synthase [c] : lipidX + u23ga --> h + lipidAds + udp (LIPIDADISACCHARIDESYNTH-RXN) ((RIGHT REMOVE PROTON)) LIPAtex lipid A transport via vector (periplasm to extracellular) lipa[p] --> lipa[e] (RXN0-1683) (:EXPANDED-RXN-MATCH) LIPAabcpp lipid A transport via ABC system (periplasm) atp[c] + h2o[c] + lipa[c] --> adp[c] + h[c] + lipa[p] + pi[c] LIPAHTex Lipid A:hexadecanoate transferase (n-C16:0) (extracellular membrane) [e] : h + hdca + lipa --> h2o + halipa LIPAHT2ex core oligosaccharide lipid A:hexadecanoate transferase (n-C16:0) (extracellular membrane) [e] : colipa + h + hdca --> h2o + hacolipa (:UNMAPPED-CPDS) LIPACabcpp lipid (cold) A transport via ABC system (periplasm) atp[c] + h2o[c] + lipa_cold[c] --> adp[c] + h[c] + lipa_cold[p] + pi[c] LGTHL lactoylglutathione lyase [c] : gthrd + mthgxl --> lgt-S (GLYOXI-RXN) LEUtex L-leucine transport via diffusion (extracellular to periplasm) leu-L[e] <==> leu-L[p] (:EXCHANGE) LEUt2rpp L-leucine reversible transport via proton symport (periplasm) h[p] + leu-L[p] <==> h[c] + leu-L[c] LEUabcpp L-leucine transport via ABC system (periplasm) atp[c] + h2o[c] + leu-L[p] --> adp[c] + h[c] + leu-L[c] + pi[c] (ABC-35-RXN) ((RIGHT REMOVE PROTON)) LEUTRS Leucyl-tRNA synthetase [c] : atp + leu-L + trnaleu --> amp + leutrna + ppi (LEUCINE--TRNA-LIGASE-RXN) LEUTAi leucine transaminase (irreversible) [c] : 4mop + glu-L --> akg + leu-L (BRANCHED-CHAINAMINOTRANSFERLEU-RXN) LDH_D2 D-lactate dehydrogenase [c] : lac-D + q8 --> pyr + q8h2 (DLACTDEHYDROGFAD-RXN) LDH_D D-lactate dehydrogenase [c] : lac-D + nad <==> h + nadh + pyr (DLACTDEHYDROGNAD-RXN) ((RIGHT REMOVE PROTON)) LCTStpp Lactose transport via proton symport (periplasm) h[p] + lcts[p] <==> h[c] + lcts[c] (TRANS-RXN-24) LCTStex Lactose transport via diffusion (extracellular to periplasm) lcts[e] <==> lcts[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) LCTSt3ipp Lactose transport via proton aniport (periplasm) h[p] + lcts[c] --> h[c] + lcts[p] (TRANS-RXN-82) LCARS lacaldehyde reductase (S-propane-1,2-diol forming) [c] : h + lald-L + nadh <==> 12ppd-S + nad (LACTALDREDUCT-RXN) ((LEFT REMOVE PROTON)) LCARR lacaldehyde reductase (R-propane-1,2-diol forming) [c] : h + lald-D + nadh <==> 12ppd-R + nad (:UNMAPPED-CPDS) LCADi lactaldehyde dehydrogenase [c] : h2o + lald-L + nad --> (2) h + lac-L + nadh (LACTALDDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) LALGP L-alanyl-gamma-L-glutamate peptidase [c] : LalaLglu + h2o --> ala-L + glu-L (:UNMAPPED-CPDS) LALDO2x D-Lactaldehyde:NAD+ 1-oxidoreductase [c] : h + mthgxl + nadh --> lald-D + nad (D-LACTALDEHYDE-DEHYDROGENASE-RXN) (:METACYC (LEFT REMOVE PROTON)) LADGMDH L-alanyl-gamma-D-glutamyl-meso-diaminopimelate hydrolase [c] : LalaDgluMdap + h2o --> 26dap-M + LalaDglu (RXN0-961) LACZpp b-galactosidase [p] : h2o + lcts --> gal + glc-D LACZ b-galactosidase [c] : h2o + lcts --> gal + glc-D (BETAGALACTOSID-RXN) LA4NTpp 4-amino-4-deoxy-L-arabinotransferase (LPS lipid A modification, periplasmic face of membrane)) [p] : colipa + uLa4n --> acolipa + udcpp (:UNMAPPED-CPDS) L-LACtex L-lactate transport via diffusion (extracellular to periplasm) lac-L[e] <==> lac-L[p] (:EXCHANGE) L-LACt2rpp L-lactate reversible transport via proton symport (periplasm) h[p] + lac-L[p] <==> h[c] + lac-L[c] (TRANS-RXN-104) L-LACD3 L-Lactate dehydrogenase (menaquinone) [c] : lac-L + mqn8 --> mql8 + pyr (L-LACTDEHYDROGFMN-RXN) (:EXPANDED-RXN-MATCH) L-LACD2 L-Lactate dehydrogenase (ubiquinone) [c] : lac-L + q8 --> pyr + q8h2 Ktex potassium transport via diffusion (extracellular to periplasm) k[e] <==> k[p] (:EXCHANGE) Kt3pp potassium transport out via proton antiport (periplasm) h[p] + k[c] --> h[c] + k[p] (TRANS-RXN-42) Kt2rpp potassium reversible transport via proton symport (periplasm) h[p] + k[p] <==> h[c] + k[c] (TRANS-RXN-3) Kt2pp potassium transport in via proton symport (periplasm) h[p] + k[p] --> h[c] + k[c] (TRANS-RXN-3) Kabcpp Potassium ABC transporter (periplasm) atp[c] + h2o[c] + k[p] --> adp[c] + h[c] + k[c] + pi[c] (TRANS-RXN-2) ((RIGHT REMOVE PROTON)) KG6PDC 3-keto-L-gulonate 6-phosphate decarboxylase [c] : 3dhgulnp + h --> co2 + xu5p-L (RXN0-705) ((LEFT REMOVE PROTON)) KDOPS 3-deoxy -D-manno-octulosonic -acid 8-phosphate synthase [c] : ara5p + h2o + pep --> kdo8p + pi (KDO-8PSYNTH-RXN) KDOPP 3-deoxy-manno-octulosonate-8-phosphatase [c] : h2o + kdo8p --> kdo + pi (KDO-8PPHOSPHAT-RXN) KDOCT2 3-deoxy-manno-octulosonate cytidylyltransferase [c] : ctp + kdo --> ckdo + ppi (CPM-KDOSYNTH-RXN) KAT8 3-ketoacyl-CoA thiolase [c] : 3oodcoa + coa --> accoa + pmtcoa KAT7 3-ketoacyl-CoA thiolase [c] : 3ohdcoa + coa --> accoa + tdcoa (2.3.1.155-RXN) (:METACYC) KAT6 3-ketoacyl-CoA thiolase [c] : 3otdcoa + coa --> accoa + ddcacoa KAT5 3-ketoacyl-CoA thiolase [c] : 3oddcoa + coa --> accoa + dcacoa (KETOACYLCOATHIOL-RXN RXN-3641) KAT4 3-ketoacyl-CoA thiolase [c] : 3odcoa + coa --> accoa + occoa KAT3 3-ketoacyl-CoA thiolase [c] : 3oocoa + coa --> accoa + hxcoa KAT2 3-ketoacyl-CoA thiolase [c] : 3ohcoa + coa --> accoa + btcoa KAT1 3-ketoacyl-CoA thiolase [c] : aacoa + coa --> (2) accoa (ACETYL-COA-ACETYLTRANSFER-RXN) KAS15 beta-ketoacyl-ACP synthase (2) [c] : accoa + h + malACP --> actACP + co2 + coa (3-OXOACYL-ACP-COA-SYNTHIII-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) KAS14 beta-ketoacyl-ACP synthase [c] : acACP + h + malACP --> ACP + actACP + co2 (3-OXOACYL-ACP-SYNTH-BASE-RXN 3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) KARA2 ketol-acid reductoisomerase (2-Acetolactate) [c] : 2ahbut + h + nadph <==> 23dhmp + nadp (ACETOOHBUTREDUCTOISOM-RXN) ((LEFT REMOVE PROTON)) KARA1 ketol-acid reductoisomerase (2,3-dihydroxy-3-methylbutanoate) [c] : 23dhmb + nadp <==> alac-S + h + nadph (ACETOLACTREDUCTOISOM-RXN) K2L4Atex KDO(2)-lipid IV A transport via vector (periplasm to extracellular) kdo2lipid4[p] --> kdo2lipid4[e] (:EXCHANGE) K2L4Aabcpp KDO(2)-lipid IV A transport via ABC system (periplasm) atp[c] + h2o[c] + kdo2lipid4[c] --> adp[c] + h[c] + kdo2lipid4[p] + pi[c] ISETACtex isethionate transport via diffusion (extracellular to periplasm) isetac[e] <==> isetac[p] (:EXCHANGE) ISETACabcpp isethionate transport via ABC system (periplasm) atp[c] + h2o[c] + isetac[p] --> adp[c] + h[c] + isetac[c] + pi[c] IPPS 2-isopropylmalate synthase [c] : 3mob + accoa + h2o --> 3c3hmp + coa + h (2-ISOPROPYLMALATESYN-RXN) ((RIGHT REMOVE PROTON)) IPPMIb 2-isopropylmalate hydratase [c] : 2ippm + h2o <==> 3c3hmp (:UNMAPPED-CPDS) IPPMIa 3-isopropylmalate dehydratase [c] : 3c2hmp <==> 2ippm + h2o (:UNMAPPED-CPDS) IPMD 3-isopropylmalate dehydrogenase [c] : 3c2hmp + nad --> 3c4mop + h + nadh (3-ISOPROPYLMALDEHYDROG-RXN) IPDPS 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (ipdp) [c] : h + h2mb4p + nadh --> h2o + ipdp + nad (ISPH2-RXN) (:EXPANDED-RXN-MATCH) IPDDI isopentenyl-diphosphate D-isomerase [c] : ipdp <==> dmpp (IPPISOM-RXN) INStex inosine transport via diffusion (extracellular to periplasm) ins[e] <==> ins[p] (:EXCHANGE) INSt2rpp inosine transport in via proton symport, reversible (periplasm) h[p] + ins[p] <==> h[c] + ins[c] (TRANS-RXN-108G) INSt2pp inosine transport in via proton symport (periplasm) h[p] + ins[p] --> h[c] + ins[c] (TRANS-RXN-108G) INSTtex inositol transport via diffusion (extracellular to periplasm) inost[e] <==> inost[p] (:EXCHANGE) INSK insosine kinase [c] : atp + ins --> adp + h + imp (INOSINEKIN-RXN) ((RIGHT REMOVE PROTON)) INSH Inosine hydrolase [c] : h2o + ins --> hxan + rib-D (INOSINE-NUCLEOSIDASE-RXN) INOSTt4pp Na+/myo-inositol symporter (periplasm) inost[p] + na1[p] --> inost[c] + na1[c] INDOLEtex Indole transport via diffusion (extracellular to periplasm) indole[e] <==> indole[p] (:EXCHANGE) INDOLEt2rpp Indole transport via proton symport, reversible (periplasm) h[p] + indole[p] <==> h[c] + indole[c] (TRANS-RXN-142) INDOLEt2pp Indole transport via proton symport, irreversible (periplasm) h[c] + indole[c] --> h[p] + indole[p] (TRANS-RXN-142) IMPtex IMP transport via diffusion (extracellular to periplasm) imp[e] <==> imp[p] (:EXCHANGE) IMPD IMP dehydrogenase [c] : h2o + imp + nad --> h + nadh + xmp (IMP-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) IMPC IMP cyclohydrolase [c] : h2o + imp <==> fprica (IMPCYCLOHYDROLASE-RXN) ILEtex L-isoleucine transport via diffusion (extracellular to periplasm) ile-L[e] <==> ile-L[p] (:EXCHANGE) ILEt2rpp L-isoleucine reversible transport via proton symport (periplasm) h[p] + ile-L[p] <==> h[c] + ile-L[c] ILEabcpp L-isoleucine transport via ABC system (periplasm) atp[c] + h2o[c] + ile-L[p] --> adp[c] + h[c] + ile-L[c] + pi[c] (ABC-15-RXN) ((RIGHT REMOVE PROTON)) ILETRS Isoleucyl-tRNA synthetase [c] : atp + ile-L + trnaile --> amp + iletrna + ppi (ISOLEUCINE--TRNA-LIGASE-RXN) ILETA isoleucine transaminase [c] : akg + ile-L <==> 3mop + glu-L (BRANCHED-CHAINAMINOTRANSFERILEU-RXN) IGPS indole-3-glycerol-phosphate synthase [c] : 2cpr5p + h --> 3ig3p + co2 + h2o (IGPSYN-RXN) ((LEFT REMOVE PROTON)) IGPDH imidazoleglycerol-phosphate dehydratase [c] : eig3p --> h2o + imacp (IMIDPHOSDEHYD-RXN) IG3PS Imidazole-glycerol-3-phosphate synthase [c] : gln-L + prlp --> aicar + eig3p + glu-L + h (GLUTAMIDOTRANS-RXN) ((RIGHT REMOVE PROTON)) IDONtex L-idonate transport via diffusion (extracellular to periplasm) idon-L[e] <==> idon-L[p] (:EXCHANGE) IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) h[p] + idon-L[p] <==> h[c] + idon-L[c] (TRANS-RXN-181) IDOND2 L-indonate 5-dehydrogenase (NADP) [c] : 5dglcn + h + nadph --> idon-L + nadp (L-IDONATE-2-DEHYDROGENASE-RXN) (:METACYC (LEFT REMOVE PROTON)) IDOND L-idonate 5-dehydrogenase [c] : 5dglcn + h + nadh <==> idon-L + nad (IDONDEHYD-RXN) ((LEFT REMOVE PROTON)) ICL Isocitrate lyase [c] : icit --> glx + succ (ISOCIT-CLEAV-RXN) ICHORT isochorismatase [c] : h2o + ichor --> 23ddhb + pyr (ISOCHORMAT-RXN) ICHORSi Isochorismate Synthase [c] : chor --> ichor (ISOCHORSYN-RXN) ICHORS isochorismate synthase [c] : chor <==> ichor (ISOCHORSYN-RXN) ICDHyr isocitrate dehydrogenase (NADP) [c] : icit + nadp <==> akg + co2 + nadph (ISOCITDEH-RXN) Htex proton transport via diffusion (extracellular to periplasm) h[e] <==> h[p] (TRANS-RXN-90) ((LEFT REMOVE PROTON)) HYXNtpp Hypoxanthine transport (periplasm) hxan[p] <==> hxan[c] (:EXCHANGE) HYXNtex Hypoxanthine transport via diffusion (extracellular to periplasm) hxan[e] <==> hxan[p] (:EXCHANGE) HYPOE hypothetical enyme [c] : h2o + pyam5p --> pi + pydam HYD3pp Hydrogenase (Demethylmenaquinone-8: 2 protons) (periplasm) 2dmmq8[c] + (2) h[c] + h2[c] --> 2dmmql8[c] + (2) h[p] HYD2pp Hydrogenase (menaquinone8: 2 protons) (periplasm) (2) h[c] + h2[c] + mqn8[c] --> (2) h[p] + mql8[c] (1.12.5.1-RXN) (:METACYC (LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) HYD1pp hydrogenase (ubiquinone-8: 2 protons) (periplasm) (2) h[c] + h2[c] + q8[c] --> (2) h[p] + q8h2[c] HXPRT hypoxanthine phosphoribosyltransferase (Hypoxanthine) [c] : hxan + prpp --> imp + ppi (HYPOXANPRIBOSYLTRAN-RXN HYPXPRIBOSYLTRAN-RXN) HXCT Acetyl-CoA:hexanoate-CoA transferase [c] : accoa + hxa --> ac + hxcoa HXAtex Hexanoate transport via diffusion (extracellular to periplasm) hxa[e] <==> hxa[p] (:EXCHANGE) HXAND hypoxanthine dehydrogenase [c] : h2o + hxan + nad --> h + nadh + xan (RXN-7682) (:METACYC) HSTPT histidinol-phosphate transaminase [c] : glu-L + imacp --> akg + hisp (HISTAMINOTRANS-RXN) HSST homoserine O-succinyltransferase [c] : hom-L + succoa --> coa + suchms (HOMSUCTRAN-RXN) HSK homoserine kinase [c] : atp + hom-L --> adp + h + phom (HOMOSERKIN-RXN) ((RIGHT REMOVE PROTON)) HSDy homoserine dehydrogenase (NADPH) [c] : hom-L + nadp <==> aspsa + h + nadph (HOMOSERDEHYDROG-RXN) (:EXPANDED-RXN-MATCH) HPYRRy Hydroxypyruvate reductase (NADPH) [c] : h + hpyr + nadph --> glyc-R + nadp (RXN0-300) ((LEFT REMOVE PROTON)) HPYRRx Hydroxypyruvate reductase (NADH) [c] : h + hpyr + nadh --> glyc-R + nad (GLYCERATE-DEHYDROGENASE-RXN) (:METACYC (LEFT REMOVE PROTON)) HPYRI hydroxypyruvate isomerase [c] : hpyr <==> 2h3oppan (RXN0-305) HPPPNtex 3-(3-hydroxyphenyl)propionate transport via diffusion (extracellular to periplasm) 3hpppn[e] <==> 3hpppn[p] (:EXCHANGE) HPPPNt2rpp 3-(3-hydroxyphenyl)propionate transport via proton symport, reversible (periplasm) 3hpppn[p] + h[p] <==> 3hpppn[c] + h[c] (TRANS-RXN-61) HPPPNDO 2,3-dihydroxypheylpropionate 1,2-dioxygenase [c] : dhpppn + o2 --> h + hkndd (1.13.11.16-RXN) ((RIGHT REMOVE PROTON)) HPPK2 6-hydroxymethyl-dihydropterin pyrophosphokinase [c] : 6hmhpt + atp --> 6hmhptpp + amp + h (H2PTERIDINEPYROPHOSPHOKIN-RXN) ((RIGHT REMOVE PROTON)) HOPNTAL 4-hydroxy-2-oxopentanoate aldolase [c] : 4h2opntn --> acald + pyr (MHPELY-RXN) HOMtex L-homoserine transport via diffusion (extracellular to periplasm) hom-L[e] <==> hom-L[p] (:EXCHANGE) HOMt2pp L-homoserineserine efflux via proton symport h[p] + hom-L[c] --> h[c] + hom-L[p] (TRANS-RXN-242) HMPK1 hydroxymethylpyrimidine kinase (ATP) [c] : 4ahmmp + atp --> 4ampm + adp + h (OHMETPYRKIN-RXN) ((RIGHT REMOVE PROTON)) HMBS hydroxymethylbilane synthase [c] : h2o + (4) ppbng --> hmbil + (4) nh4 (OHMETHYLBILANESYN-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) HKNTDH 2-hydroxy-6-ketononotrienedioate hydrolase [c] : h2o + hkntd --> fum + h + op4en (:UNMAPPED-CPDS) HKNDDH 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase [c] : h2o + hkndd --> h + op4en + succ (MHPCHYDROL-RXN) ((RIGHT REMOVE PROTON)) HIStex L-histidine transport via diffusion (extracellular to periplasm) his-L[e] <==> his-L[p] (:EXCHANGE) HISt2rpp L-histidine reversible transport via proton symport (periplasm) h[p] + his-L[p] <==> h[c] + his-L[c] HISabcpp L-histidine transport via ABC system (periplasm) atp[c] + h2o[c] + his-L[p] --> adp[c] + h[c] + his-L[c] + pi[c] (ABC-14-RXN) ((RIGHT REMOVE PROTON)) HISTRS Histidyl-tRNA synthetase [c] : atp + his-L + trnahis --> amp + histrna + ppi (HISTIDINE--TRNA-LIGASE-RXN) HISTP histidinol-phosphatase [c] : h2o + hisp --> histd + pi (HISTIDPHOS-RXN) HISTD histidinol dehydrogenase [c] : h2o + histd + (2) nad --> (3) h + his-L + (2) nadh HG2tex mercury (Hg+2) transport via diffusion (extracellular to periplasm) hg2[e] <==> hg2[p] (:EXCHANGE) HG2abcpp Mercury (Hg+2) ABC transporter (periplasm) atp[c] + h2o[c] + hg2[c] --> adp[c] + h[c] + hg2[p] + pi[c] HEXt2rpp hexanoate transport via proton symport, reversible (periplasm) h[p] + hxa[p] <==> h[c] + hxa[c] HEX7 hexokinase (D-fructose:ATP) [c] : atp + fru --> adp + f6p + h (FRUCTOKINASE-RXN) ((RIGHT REMOVE PROTON)) HEX4 hexokinase (D-mannose:ATP) [c] : atp + man --> adp + h + man6p (MANNKIN-RXN) ((RIGHT REMOVE PROTON)) HEX1 hexokinase (D-glucose:ATP) [c] : atp + glc-D --> adp + g6p + h (GLUCOKIN-RXN) ((RIGHT REMOVE PROTON)) HETZK hydroxyethylthiazole kinase [c] : 4mhetz + atp --> 4mpetz + adp + h (THIAZOLSYN3-RXN) ((RIGHT REMOVE PROTON)) HEPT4 heptosyltransferase IV (LPS core synthesis) [c] : adphep-LD + gggagicolipa --> adp + colipa + h (:UNMAPPED-CPDS) HEPT3 heptosyltransferase III (LPS core synthesis) [c] : adphep-LD + phhlipa --> adp + h + hphhlipa (:UNMAPPED-CPDS) HEPT2 heptosyltransferase II (LPS core synthesis) [c] : adphep-LD + hlipa --> adp + h + hhlipa (:UNMAPPED-CPDS) HEPT1 heptosyltransferase I (LPS core synthesis) [c] : adphep-LD + lipa --> adp + h + hlipa (RXN0-5118) ((RIGHT REMOVE PROTON)) HEPK2 LPS heptose kinase II (LPS core synthesis) [c] : atp + hphhlipa --> adp + h + phphhlipa (:UNMAPPED-CPDS) HEPK1 LPS heptose kinase I (LPS core synthesis) [c] : atp + hhlipa --> adp + h + phhlipa (:UNMAPPED-CPDS) HEMEOS Heme O synthase [c] : frdp + h2o + pheme --> hemeO + ppi (HEMEOSYN-RXN) HDCOAI hexadecenoyl-coa cis-trans isomerization [c] : hdcoa --> hdd2coa (ENOYL-COA-DELTA-ISOM-RXN) HDCEAtexi Hexadecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) hdcea[e] --> hdcea[p] (:EXCHANGE) HDCAtexi Hexadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) hdca[e] --> hdca[p] (:EXCHANGE) HCYSMT2 Homocysteine Methyltransferase [c] : hcys-L + mmet --> h + (2) met-L (MMUM-RXN) ((RIGHT REMOVE PROTON)) HCYSMT homocysteine S-methyltransferase [c] : amet + hcys-L --> ahcys + h + met-L (HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN) ((RIGHT REMOVE PROTON)) HCO3E HCO3 equilibration reaction [c] : co2 + h2o <==> h + hco3 HCINNMtex 3-hydroxycinnamic acid transport via diffusion (extracellular to periplasm) 3hcinnm[e] <==> 3hcinnm[p] (:UNMAPPED-CPDS) HCINNMt2rpp 3-hydroxycinnamic acid transport via proton symport, reversible (periplasm) 3hcinnm[p] + h[p] <==> 3hcinnm[c] + h[c] (:UNMAPPED-CPDS) HBZOPT Hydroxybenzoate octaprenyltransferase [c] : 4hbz + octdp --> 3ophb + ppi (4OHBENZOATE-OCTAPRENYLTRANSFER-RXN) HACD8i 3-hydroxyacyl-CoA dehydrogenase (3-oxooctadecanoyl-CoA) [c] : 3hodcoa + nad --> 3oodcoa + h + nadh (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HACD7i 3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA) [c] : 3hhdcoa + nad --> 3ohdcoa + h + nadh HACD6i 3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA) [c] : 3htdcoa + nad --> 3otdcoa + h + nadh (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HACD5i 3-hydroxyacyl-CoA dehydrogenase (3-oxododecanoyl-CoA) [c] : 3hddcoa + nad --> 3oddcoa + h + nadh (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HACD4i 3-hydroxyacyl-CoA dehydrogenase (3-oxodecanoyl-CoA) [c] : 3hdcoa + nad --> 3odcoa + h + nadh (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HACD3i 3-hydroxyacyl-CoA dehydrogenase (3-oxooctanoyl-CoA) [c] : 3hocoa + nad --> 3oocoa + h + nadh (OHACYL-COA-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) HACD2i 3-hydroxyacyl-CoA dehydrogenase (3-oxohexanoyl-CoA) [c] : 3hhcoa + nad --> 3ohcoa + h + nadh HACD1i 3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA) [c] : 3hbcoa + nad --> aacoa + h + nadh (1.1.1.211-RXN OHACYL-COA-DEHYDROG-RXN) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) H2tpp hydrogen transport diffusion (periplasm) h2[p] <==> h2[c] (:EXCHANGE) H2tex hydrogen transport via diffusion (extracellular to periplasm) h2[e] <==> h2[p] (:EXCHANGE) H2Stex h2s transport via diffusion (extracellular to periplasm) h2s[e] <==> h2s[p] (:EXCHANGE) H2St1pp h2s transport (periplasm) h2s[c] --> h2s[p] (:EXCHANGE) H2SO Hydrogen sulfide oxidation [c] : h2s + (2) o2 --> (2) h + so4 H2Otpp H2O transport via diffusion (periplasm) h2o[p] <==> h2o[c] (TRANS-RXN-145) H2Otex H2O transport via diffusion (extracellular to periplasm) h2o[e] <==> h2o[p] (:EXCHANGE) H2O2tex hydrogen peroxide transport via diffusion (external) h2o2[e] <==> h2o2[p] (:EXCHANGE) GUR1PPpp Glucuronate 1-phosphate phosphatase (periplasm) [p] : glcur1p + h2o --> glcur + pi GUI2 glucuronate isomerase (D-galacturonate) [c] : galur <==> tagur (GALACTUROISOM-RXN) GUI1 glucuronate isomerase (D-glucuronate) [c] : glcur <==> fruur (GLUCUROISOM-RXN) GUAtpp Guanine transport via diffusion (periplasm) gua[p] <==> gua[c] (:EXCHANGE) GUAtex Guanine transport via diffusion (extracellular to periplasm) gua[e] <==> gua[p] (:EXCHANGE) GUAt2pp guanine transport in via proton symport (periplasm) gua[p] + h[p] --> gua[c] + h[c] GUAPRT guanine phosphoribosyltransferase [c] : gua + prpp --> gmp + ppi (GUANPRIBOSYLTRAN-RXN) GUAD guanine deaminase [c] : gua + h + h2o --> nh4 + xan (GUANINE-DEAMINASE-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) GTPtex GTP transport via diffusion (extracellular to periplasm) gtp[e] <==> gtp[p] (:EXCHANGE) GTPHs spontaneous GTP amine hydrolysis [c] : gtp + h + h2o --> nh4 + xtp GTPDPK GTP diphosphokinase [c] : atp + gtp --> amp + gdptp + h (GTPPYPHOSKIN-RXN) ((RIGHT REMOVE PROTON)) GTPDPDP guanosine-5'-triphosphate,3'-diphosphate diphosphatase [c] : gdptp + h2o --> h + pi + ppgpp (PPPGPPHYDRO-RXN) ((RIGHT REMOVE PROTON)) GTPCII2 GTP cyclohydrolase II (25drapp) [c] : gtp + (3) h2o --> 25drapp + for + (2) h + ppi (GTP-CYCLOHYDRO-II-RXN) ((RIGHT REMOVE PROTON)) GTPCI GTP cyclohydrolase I [c] : gtp + h2o --> ahdt + for + h (GTP-CYCLOHYDRO-I-RXN) ((RIGHT REMOVE PROTON)) GTHS glutathione synthetase [c] : atp + glucys + gly --> adp + gthrd + h + pi (GLUTATHIONE-SYN-RXN) ((RIGHT REMOVE PROTON)) GTHRDtex glutathione transport via diffusion (extracellular to periplasm) gthrd[e] <==> gthrd[p] (:EXCHANGE) GTHRDabcpp Reduced glutathione via ABC system (periplasm) atp[c] + gthrd[p] + h2o[c] --> adp[c] + gthrd[c] + h[c] + pi[c] GTHRDabc2pp glutathione export via ABC system (cytoplasm to periplasm) atp[c] + gthrd[c] + h2o[c] --> adp[c] + gthrd[p] + h[c] + pi[c] GTHRDHpp glutathione hydralase (periplasmic) [p] : gthrd + h2o --> cgly + glu-L (:UNMAPPED-CPDS) GTHOr glutathione oxidoreductase [c] : gthox + h + nadph <==> (2) gthrd + nadp (GLUTATHIONE-REDUCT-NADPH-RXN) GTHOXtex glutathione (ox) transport via diffusion (extracellular to periplasm) gthox[e] <==> gthox[p] (:EXCHANGE) GSPMDS Glutathionylspermidine synthetase [c] : atp + gthrd + spmd --> adp + gtspmd + h + pi (GSPSYN-RXN) ((RIGHT REMOVE PROTON)) GSPMDA Glutathionylspermidine amidase [c] : gtspmd + h2o --> gthrd + spmd (GSPAMID-RXN) GSNtex guanosine transport via diffusion (extracellular to periplasm) gsn[e] <==> gsn[p] (:EXCHANGE) GSNt2pp guanosine transport in via proton symport (periplasm) gsn[p] + h[p] --> gsn[c] + h[c] (TRANS-RXN-108) (:EXPANDED-RXN-MATCH) GSNK guanosine kinase [c] : atp + gsn --> adp + gmp + h (GUANOSINEKIN-RXN) ((RIGHT REMOVE PROTON)) GRXR glutaredoxin reductase [c] : grxox + (2) gthrd --> grxrd + gthox (PRODISULFREDUCT-A-RXN) (:EXPANDED-RXN-MATCH) GRTT geranyltranstransferase [c] : grdp + ipdp --> frdp + ppi (FPPSYN-RXN) GPDDA5pp Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol) [p] : g3pi + h2o --> glyc3p + h + inost GPDDA5 Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol) [c] : g3pi + h2o --> glyc3p + h + inost (3.1.4.44-RXN) (:METACYC (RIGHT REMOVE PROTON)) GPDDA4pp Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol) [p] : g3pg + h2o --> glyc + glyc3p + h GPDDA4 Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol) [c] : g3pg + h2o --> glyc + glyc3p + h GPDDA3pp Glycerophosphodiester phosphodiesterase (Glycerophosphoserine) [p] : g3ps + h2o --> glyc3p + h + ser-L (:UNMAPPED-CPDS) GPDDA3 Glycerophosphodiester phosphodiesterase (Glycerophosphoserine) [c] : g3ps + h2o --> glyc3p + h + ser-L (:UNMAPPED-CPDS) GPDDA2pp Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine) [p] : g3pe + h2o --> etha + glyc3p + h GPDDA2 Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine) [c] : g3pe + h2o --> etha + glyc3p + h GPDDA1pp Glycerophosphodiester phosphodiesterase (Glycerophosphocholine) [p] : g3pc + h2o --> chol + glyc3p + h GPDDA1 Glycerophosphodiester phosphodiesterase (Glycerophosphocholine) [c] : g3pc + h2o --> chol + glyc3p + h (3.1.4.2-RXN) (:METACYC (RIGHT REMOVE PROTON)) GP4GH Gp4G hydrolase [c] : gp4g + h2o --> (2) gdp + (2) h GOFUCR GDP-4-oxo-L-fucose reductase [c] : gdpofuc + h + nadph --> gdpfuc + nadp (:UNMAPPED-CPDS) GNK gluconokinase [c] : atp + glcn --> 6pgc + adp + h (GLUCONOKIN-RXN) ((RIGHT REMOVE PROTON)) GND phosphogluconate dehydrogenase [c] : 6pgc + nadp --> co2 + nadph + ru5p-D (6PGLUCONDEHYDROG-RXN) (:EXPANDED-RXN-MATCH) GMPtex GMP transport via diffusion (extracellular to periplasm) gmp[e] <==> gmp[p] (:EXCHANGE) GMPS2 GMP synthase [c] : atp + gln-L + h2o + xmp --> amp + glu-L + gmp + (2) h + ppi (GMP-SYN-GLUT-RXN) ((RIGHT REMOVE PROTON)) GMPR GMP reductase [c] : gmp + (2) h + nadph --> imp + nadp + nh4 (GMP-REDUCT-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) GMHEPPA D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [c] : gmhep17bp + h2o --> gmhep1p + pi GMHEPK D-glycero-D-manno-heptose 7-phosphate kinase [c] : atp + gmhep7p --> adp + gmhep17bp + h (RXN0-4341) ((RIGHT REMOVE PROTON)) GMHEPAT D-glycero-D-manno-hepose 1-phosphate adenyltransferase [c] : atp + gmhep1p + h --> adphep-DD + ppi (RXN0-4342) ((LEFT REMOVE PROTON)) GMAND GDP-D-mannose dehydratase [c] : gdpmann --> gdpddman + h2o (GDPMANDEHYDRA-RXN) GLYtex Glycine transport via diffusion (extracellular to periplasm) gly[e] <==> gly[p] (:EXCHANGE) GLYt2rpp glycine reversible transport via proton symport (periplasm) gly[p] + h[p] <==> gly[c] + h[c] (TRANS-RXN-62B) GLYTRS Glycyl-tRNA synthetase [c] : atp + gly + trnagly --> amp + glytrna + ppi (GLYCINE--TRNA-LIGASE-RXN) GLYOX3 glyoxalase III [c] : h2o + mthgxl --> h + lac-D (GLYOXIII-RXN) ((RIGHT REMOVE PROTON)) GLYOX hydroxyacylglutathione hydrolase [c] : h2o + lgt-S --> gthrd + h + lac-D (GLYOXII-RXN) ((RIGHT REMOVE PROTON)) GLYK glycerol kinase [c] : atp + glyc --> adp + glyc3p + h (GLYCEROL-KIN-RXN) ((RIGHT REMOVE PROTON)) GLYCtpp glycerol transport via channel (periplasm) glyc[c] <==> glyc[p] (TRANS-RXN-131) GLYCtex glycerol transport via diffusion (extracellular to periplasm) glyc[e] <==> glyc[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) GLYCTO4 Glycolate oxidase [c] : 2dmmq8 + glyclt --> 2dmmql8 + glx GLYCTO3 Glycolate oxidase [c] : glyclt + mqn8 --> glx + mql8 GLYCTO2 Glycolate oxidase [c] : glyclt + q8 --> glx + q8h2 GLYCLTtex glycolate transport via diffusion (extracellular to periplasm) glyclt[e] <==> glyclt[p] (:EXCHANGE) GLYCLTt4pp glycolate transport via sodium symport (periplasm) glyclt[p] + na1[p] --> glyclt[c] + na1[c] GLYCLTt2rpp glycolate transport via proton symport, reversible (periplasm) glyclt[p] + h[p] <==> glyclt[c] + h[c] (TRANS-RXN-105) GLYCLTDy Glycolate dehydrogenase (NADP) [c] : glx + h + nadph --> glyclt + nadp (|GLYOXYLATE-REDUCTASE-(NADP+)-RXN|) ((LEFT REMOVE PROTON)) GLYCLTDx Glycolate dehydrogenase (NAD) [c] : glx + h + nadh --> glyclt + nad (GLYCOLATE-REDUCTASE-RXN) (:METACYC (LEFT REMOVE PROTON)) GLYCL Glycine Cleavage System [c] : gly + nad + thf --> co2 + mlthf + nadh + nh4 (GCVMULTI-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) GLYCK2 glycerate kinase [c] : atp + glyc-R --> 2pg + adp + h (GKI-RXN) ((RIGHT REMOVE PROTON)) GLYCK glycerate kinase [c] : atp + glyc-R --> 3pg + adp + h (GLY3KIN-RXN) ((RIGHT REMOVE PROTON)) GLYCDx Glycerol dehydrogenase [c] : glyc + nad --> dha + h + nadh (GLYCDEH-RXN) ((RIGHT REMOVE PROTON)) GLYCAtex D-glycerate transport via diffusion (extracellular to periplasm) glyc-R[e] <==> glyc-R[p] (:EXCHANGE) GLYCAt2rpp D-glycerate transport via proton symport, reversible (periplasm) glyc-R[p] + h[p] <==> glyc-R[c] + h[c] GLYC3Ptex Glycerol-3-phosphate transport via diffusion (extracellular to periplasm) glyc3p[e] <==> glyc3p[p] (:EXCHANGE) GLYC3Pt6pp Glycerol-3-phosphate : phosphate antiporter (periplasm) glyc3p[p] + pi[c] --> glyc3p[c] + pi[p] GLYC3Pabcpp sn-Glycerol 3-phosphate transport via ABC system (periplasm) atp[c] + glyc3p[p] + h2o[c] --> adp[c] + glyc3p[c] + h[c] + pi[c] (ABC-34-RXN) ((RIGHT REMOVE PROTON)) GLYC2Ptex Glycerol-2-phosphate transport via diffusion (extracellular to periplasm) glyc2p[e] <==> glyc2p[p] (:EXCHANGE) GLYBtex Glycine betaine transport via diffusion (extracellular to periplasm) glyb[e] <==> glyb[p] (:EXCHANGE) GLYBt2rpp Glycine betaine transport via proton symport, reversible (periplasm) glyb[p] + h[p] <==> glyb[c] + h[c] (TRANS-RXN-29A) GLYBabcpp Glycine betaine transport via ABC system (periplasm) atp[c] + glyb[p] + h2o[c] --> adp[c] + glyb[c] + h[c] + pi[c] GLYAT glycine C-acetyltransferase [c] : accoa + gly <==> 2aobut + coa (AKBLIG-RXN) GLYALDtpp Glyceraldehyde facilitated diffusion (periplasm) glyald[p] <==> glyald[c] (:EXCHANGE) GLYALDtex Glyceraldehyde transport via diffusion (extracellular to periplasm) glyald[e] <==> glyald[p] (:EXCHANGE) GLXCL glyoxalate carboligase [c] : (2) glx + h --> 2h3oppan + co2 (GLYOCARBOLIG-RXN) ((LEFT REMOVE PROTON)) GLUtex L-glutamate transport via diffusion (extracellular to periplasm) glu-L[e] <==> glu-L[p] (:EXCHANGE) GLUt4pp Na+/glutamate symport (periplasm) glu-L[p] + na1[p] --> glu-L[c] + na1[c] (TRANS-RXN-122) GLUt2rpp L-glutamate transport via proton symport, reversible (periplasm) glu-L[p] + h[p] <==> glu-L[c] + h[c] (TRANS-RXN-162) GLUabcpp L-glutamate transport via ABC system (periplasm) atp[c] + glu-L[p] + h2o[c] --> adp[c] + glu-L[c] + h[c] + pi[c] (ABC-13-RXN) ((RIGHT REMOVE PROTON)) GLUTRS Glutamyl-tRNA synthetase [c] : atp + glu-L + trnaglu --> amp + glutrna + ppi (GLURS-RXN) GLUTRR glutamyl-tRNA reductase [c] : glutrna + h + nadph --> glu1sa + nadp + trnaglu (GLUTRNAREDUCT-RXN) GLUSy glutamate synthase (NADPH) [c] : akg + gln-L + h + nadph --> (2) glu-L + nadp (GLUTAMATESYN-RXN) ((LEFT REMOVE PROTON)) GLUR glutamate racemase [c] : glu-D <==> glu-L (GLUTRACE-RXN) GLUPRT glutamine phosphoribosyldiphosphate amidotransferase [c] : gln-L + h2o + prpp --> glu-L + ppi + pram (PRPPAMIDOTRANS-RXN) GLUNpp glutaminase [p] : gln-L + h2o --> glu-L + nh4 GLUN glutaminase [c] : gln-L + h2o --> glu-L + nh4 (GLUTAMIN-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) GLUDy glutamate dehydrogenase (NADP) [c] : glu-L + h2o + nadp <==> akg + h + nadph + nh4 GLUDC Glutamate Decarboxylase [c] : glu-L + h --> 4abut + co2 (GLUTDECARBOX-RXN) ((LEFT REMOVE PROTON)) GLUCYS gamma-glutamylcysteine synthetase [c] : atp + cys-L + glu-L --> adp + glucys + h + pi (GLUTCYSLIG-RXN) ((RIGHT REMOVE PROTON)) GLUABUTt7pp 4-aminobutyrate/glutamate antiport (periplasm) 4abut[c] + glu-L[p] <==> 4abut[p] + glu-L[c] (TRANS-RXN-261) GLU5K glutamate 5-kinase [c] : atp + glu-L --> adp + glu5p (GLUTKIN-RXN) GLTPD Galactitol-1-phosphate dehydrogenase [c] : galt1p + nad <==> h + nadh + tag6p-D (GALACTITOLPDEHYD-RXN) ((RIGHT REMOVE PROTON)) GLNtex L-glutamine transport via diffusion (extracellular to periplasm) gln-L[e] <==> gln-L[p] (:EXCHANGE) GLNabcpp L-glutamine transport via ABC system (periplasm) atp[c] + gln-L[p] + h2o[c] --> adp[c] + gln-L[c] + h[c] + pi[c] (ABC-12-RXN) ((RIGHT REMOVE PROTON)) GLNTRS Glutaminyl-tRNA synthetase [c] : atp + gln-L + trnagln --> amp + glntrna + ppi (GLUTAMINE--TRNA-LIGASE-RXN) GLNS glutamine synthetase [c] : atp + glu-L + nh4 --> adp + gln-L + h + pi (GLUTAMINESYN-RXN) ((LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT REMOVE PROTON)) GLGC glucose-1-phosphate adenylyltransferase [c] : atp + g1p + h --> adpglc + ppi (GLUC1PADENYLTRANS-RXN) ((LEFT REMOVE PROTON)) GLDBRAN2 glycogen debranching enzyme (bglycogen -> glycogen) [c] : bglycogen --> glycogen (GLYCOGEN-BRANCH-RXN) GLCtexi D-glucoseMaltotriose transport via diffusion (extracellular to periplasm) irreversible glc-D[e] --> glc-D[p] (RXN0-1683) GLCtex glucose transport via diffusion (extracellular to periplasm) glc-D[e] <==> glc-D[p] (RXN0-1683) GLCt2pp D-glucose transport in via proton symport (periplasm) glc-D[p] + h[p] --> glc-D[c] + h[c] GLCptspp D-glucose transport via PEP:Pyr PTS (periplasm) glc-D[p] + pep[c] --> g6p[c] + pyr[c] (TRANS-RXN-157) GLCabcpp D-glucose transport via ABC system (periplasm) atp[c] + glc-D[p] + h2o[c] --> adp[c] + glc-D[c] + h[c] + pi[c] GLCURtex D-glucuronat transport via diffusion (extracellular to periplasm) glcur[e] <==> glcur[p] (:EXCHANGE) GLCURt2rpp D-glucuronate transport via proton symport, reversible (periplasm) glcur[p] + h[p] <==> glcur[c] + h[c] (TRANS-RXN-35) GLCUR1Ptex D-glucuronate 1-phosphate transport via diffusion (extracellular to periplasm) glcur1p[e] <==> glcur1p[p] (:EXCHANGE) GLCTR3 glucosyltransferase III (LPS core synthesis) [c] : ggagicolipa + udpg --> gggagicolipa + h + udp (:UNMAPPED-CPDS) GLCTR2 glucosyltransferase II (LPS core synthesis) [c] : gagicolipa + udpg --> ggagicolipa + h + udp (:UNMAPPED-CPDS) GLCTR1 glucosyltransferase I (LPS core synthesis) [c] : icolipa + udpg --> gicolipa + h + udp (:UNMAPPED-CPDS) GLCS1 glycogen synthase (ADPGlc) [c] : adpglc --> adp + glycogen + h GLCRtex D-glucarate transport via diffusion (extracellular to periplasm) glcr[e] <==> glcr[p] (:EXCHANGE) GLCRt2rpp D-glucarate transport via proton symport, reversible (periplasm) glcr[p] + h[p] <==> glcr[c] + h[c] GLCRD glucarate dehydratase [c] : glcr --> 5dh4dglc + h2o (GLUCARDEHYDRA-RXN) GLCRAL 5-dehydro-4-deoxyglucarate aldolase [c] : 5dh4dglc --> 2h3oppan + pyr (KDGALDOL-RXN) GLCP2 glycogen phosphorylase [c] : bglycogen + pi --> g1p GLCP glycogen phosphorylase [c] : glycogen + pi --> g1p GLCNtex D-gluconate transport via diffusion (extracellular to periplasm) glcn[e] <==> glcn[p] (:EXCHANGE) GLCNt2rpp D-gluconate transport via proton symport, reversible (periplasm) glcn[p] + h[p] <==> glcn[c] + h[c] GLCDpp Glucose dehydrogenase (ubiquinone-8 as acceptor) (periplasm) glc-D[p] + h2o[p] + q8[c] --> glcn[p] + h[p] + q8h2[c] GLCATr D-glucose O-acetyltransferase [c] : accoa + glc-D <==> acglc-D + coa GLBRAN2 1,4-alpha-glucan branching enzyme (glycogen -> bglycogen) [c] : glycogen --> bglycogen (GLYCOGEN-BRANCH-RXN) GK1 guanylate kinase (GMP:ATP) [c] : atp + gmp <==> adp + gdp (GUANYL-KIN-RXN) GHMT2r glycine hydroxymethyltransferase, reversible [c] : ser-L + thf <==> gly + h2o + mlthf (GLYOHMETRANS-RXN) GGPTRCS gamma glutamyl putrescine synthase [c] : atp + glu-L + ptrc --> adp + ggptrc + h + pi (RXN0-3901) ((RIGHT REMOVE PROTON)) GGPTRCO gamma glutamyl putrescine oxidase [c] : ggptrc + h2o + o2 --> ggbutal + h2o2 + nh4 (RXN0-3921) GGGABAH gamma-glutamyl-gamma-aminobutyric acid hydrolase [c] : gg4abut + h2o --> 4abut + glu-L (RXN0-3942) GGGABADr gamma-glutamyl-gamma aminobutyric acid dehydrogenase [c] : ggbutal + h2o + nadp <==> gg4abut + (2) h + nadph (RXN0-3922) (:EXPANDED-RXN-MATCH) GF6PTA glutamine-fructose-6-phosphate transaminase [c] : f6p + gln-L --> gam6p + glu-L (L-GLN-FRUCT-6-P-AMINOTRANS-RXN) GDPtex GDP transport via diffusion (extracellular to periplasm) gdp[e] <==> gdp[p] (:EXCHANGE) GDPMNH GDP-mannose mannosyl hydrolase [c] : gdpmann + h2o --> gdp + h + man (GDPMANMANHYDRO-RXN) ((RIGHT REMOVE PROTON)) GDPDPK GDP diphosphokinase [c] : atp + gdp --> amp + h + ppgpp (GDPPYPHOSKIN-RXN) ((RIGHT REMOVE PROTON)) GDMANE GDP-4-dehydro-6-deoxy-D-mannose epimerase [c] : gdpddman --> gdpofuc (:UNMAPPED-CPDS) GCALDD Glycolaldehyde dehydrogenase [c] : gcald + h2o + nad --> glyclt + (2) h + nadh (GLYCOLALD-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) GBBTNtex gamma-butyrobetaine transport via diffusion (extracellular to periplasm) gbbtn[e] <==> gbbtn[p] (:EXCHANGE) GART GAR transformylase-T [c] : atp + for + gar --> adp + fgam + h + pi (GARTRANSFORMYL2-RXN) ((RIGHT REMOVE PROTON)) GARFT phosphoribosylglycinamide formyltransferase [c] : 10fthf + gar <==> fgam + h + thf (GART-RXN) ((RIGHT REMOVE PROTON)) GAPD glyceraldehyde-3-phosphate dehydrogenase [c] : g3p + nad + pi <==> 13dpg + h + nadh (GAPOXNPHOSPHN-RXN) ((RIGHT REMOVE PROTON)) GAMtex D-glucosamine transport via diffusion (extracellular to periplasm) gam[e] <==> gam[p] (:EXCHANGE) GAMptspp D-glucosamine transport via PEP:Pyr PTS (periplasm) gam[p] + pep[c] --> gam6p[c] + pyr[c] (TRANS-RXN-167A) GAMAN6Ptex D-glucosamine 6-phosphate transport via diffusion (extracellular to periplasm) gam6p[e] <==> gam6p[p] (:EXCHANGE) GAM6Pt6_2pp D-Glucosamine 6-phosphate transport via phosphate antiport (periplasm) gam6p[p] + (2) pi[c] --> gam6p[c] + (2) pi[p] GALtex D-galactose transport via diffusion (extracellular to periplasm) gal[e] <==> gal[p] (RXN0-1683) GALt2pp D-galactose transport in via proton symport (periplasm) gal[p] + h[p] --> gal[c] + h[c] (TRANS-RXN-21) GALabcpp D-galactose transport via ABC system (periplasm) atp[c] + gal[p] + h2o[c] --> adp[c] + gal[c] + h[c] + pi[c] (ABC-18-RXN) ((RIGHT REMOVE PROTON)) GALUi UTP-glucose-1-phosphate uridylyltransferase (irreversible) [c] : g1p + h + utp --> ppi + udpg (GLUC1PURIDYLTRANS-RXN) ((LEFT REMOVE PROTON)) GALURtex D-galacturonate transport via diffusion (extracellular to periplasm) galur[e] <==> galur[p] (:EXCHANGE) GALURt2rpp D-galacturonate transport via proton symport, reversible (periplasm) galur[p] + h[p] <==> galur[c] + h[c] (TRANS-RXN-123) GALTtex Galactitol transport via diffusion (extracellular to periplasm) galt[e] <==> galt[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) galt[p] + pep[c] --> galt1p[c] + pyr[c] (TRANS-RXN-161) GALT1 galactosyltransferase I (LPS core synthesis) [c] : gicolipa + udpg --> gagicolipa + h + udp (:UNMAPPED-CPDS) GALS3 a-galactosidase (melibiose) [c] : h2o + melib --> gal + glc-D (ALPHAGALACTOSID-RXN) GALM2pp aldose-1-epimerase [p] : gal-bD --> gal GALKr galactokinase [c] : atp + gal <==> adp + gal1p + h (GALACTOKIN-RXN) ((RIGHT REMOVE PROTON)) GALCTtex D-galactarte transport via diffusion (extracellular to periplasm) galct-D[e] <==> galct-D[p] (:EXCHANGE) GALCTt2rpp D-galactarte transport via proton symport, reversible (periplasm) galct-D[p] + h[p] <==> galct-D[c] + h[c] GALCTNtex D-galactonate transport via diffusion (extracellular to periplasm) galctn-D[e] <==> galctn-D[p] (:EXCHANGE) GALCTNt2rpp D-galactonate transport via proton symport, reversible (periplasm) galctn-D[p] + h[p] <==> galctn-D[c] + h[c] (TRANS-RXN-16) GALCTND galactonate dehydratase [c] : galctn-D --> 2dh3dgal + h2o (GALACTONDEHYDRAT-RXN) GALCTD galactarate dehydratase [c] : galct-D --> 5dh4dglc + h2o (GALACTARDEHYDRA-RXN) GALBDtex beta D-galactose transport via diffusion (extracellular to periplasm) gal-bD[e] <==> gal-bD[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) GAL1Ptex D-galactose 1-phosphate transport via diffusion (extracellular to periplasm) gal1p[e] <==> gal1p[p] (:EXCHANGE) GAL1PPpp D-galactose 1-phosphatase [p] : gal1p + h2o --> gal + pi G6Ptex glucose 6-phosphate transport via diffusion (extracellular to periplasm) g6p[e] <==> g6p[p] (:EXCHANGE) G6Pt6_2pp Glucose-6-phosphate transport via phosphate antiport (periplasm) g6p[p] + (2) pi[c] --> g6p[c] + (2) pi[p] G6PP glucose-6-phosphate phosphatase [c] : g6p + h2o --> glc-D + pi (SUGAR-PHOSPHATASE-RXN) (:EXPANDED-RXN-MATCH) G6PDH2r glucose 6-phosphate dehydrogenase [c] : g6p + nadp <==> 6pgl + h + nadph (GLU6PDEHYDROG-RXN) G6PDA glucosamine-6-phosphate deaminase [c] : gam6p + h2o --> f6p + nh4 (GLUCOSAMINE-6-P-DEAMIN-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) G5SD glutamate-5-semialdehyde dehydrogenase [c] : glu5p + h + nadph --> glu5sa + nadp + pi (GLUTSEMIALDEHYDROG-RXN) G5SADr L-glutamate 5-semialdehyde dehydratase, reversible [c] : glu5sa <==> 1pyr5c + h + h2o (SPONTPRO-RXN) ((RIGHT REMOVE PROTON)) G3PT glycerol-3-phosphatase [c] : glyc3p + h2o --> glyc + pi (GLYCEROL-1-PHOSPHATASE-RXN) (:METACYC) G3PStex glycerophosphserine transport via diffusion (extracellular to periplasm) g3ps[e] <==> g3ps[p] (:UNMAPPED-CPDS) G3PSabcpp sn-glycerol-3-phosphoserine transport via ABC system (periplasm) atp[c] + g3ps[p] + h2o[c] --> adp[c] + g3ps[c] + h[c] + pi[c] (:UNMAPPED-CPDS) G3PItex glycero-3-phospho-1-inositol transport via diffusion (extracellular to periplasm) g3pi[e] <==> g3pi[p] (:EXCHANGE) G3PIabcpp sn-glycerol-3-phosphoethanolamine transport via ABC system (periplasm) atp[c] + g3pi[p] + h2o[c] --> adp[c] + g3pi[c] + h[c] + pi[c] G3PGtex glycerophoglycerol transport via diffusion (extracellular to periplasm) g3pg[e] <==> g3pg[p] (:EXCHANGE) G3PGabcpp sn-glycerol-3-phosphoglycerol transport via ABC system (periplasm) atp[c] + g3pg[p] + h2o[c] --> adp[c] + g3pg[c] + h[c] + pi[c] G3PEtex glycero-3-phosphoethanolamine transport via diffusion (extracellular to periplasm) g3pe[e] <==> g3pe[p] (:EXCHANGE) G3PEabcpp sn-glycerol-3-phosphoethanolamine transport via ABC system (periplasm) atp[c] + g3pe[p] + h2o[c] --> adp[c] + g3pe[c] + h[c] + pi[c] G3PD7 glycerol-3-phosphate dehydrogenase (demethylmenaquinone-8) [c] : 2dmmq8 + glyc3p --> 2dmmql8 + dhap G3PD6 glycerol-3-phosphate dehydrogenase (menaquinone-8) [c] : glyc3p + mqn8 --> dhap + mql8 G3PD5 glycerol-3-phosphate dehydrogenase (ubiquinone-8) [c] : glyc3p + q8 --> dhap + q8h2 (GLYC3PDEHYDROG-RXN) G3PD2 glycerol-3-phosphate dehydrogenase (NADP) [c] : glyc3p + nadp <==> dhap + h + nadph (GLYC3PDEHYDROGBIOSYN-RXN) (:EXPANDED-RXN-MATCH) G3PCtex glycero-3-phosphocholine transport via diffusion (extracellular to periplasm) g3pc[e] <==> g3pc[p] (:EXCHANGE) G3PCabcpp sn-glycerol-3-phosphocholine transport via ABC system (periplasm) atp[c] + g3pc[p] + h2o[c] --> adp[c] + g3pc[c] + h[c] + pi[c] G3PAT181 glycerol-3-phosphate acyltransferase (C18:1) [c] : glyc3p + octeACP --> 1odec11eg3p + ACP (GLYCEROL-3-P-ACYLTRANSFER-RXN) G3PAT180 glycerol-3-phosphate acyltransferase (C18:0) [c] : glyc3p + ocdcaACP --> 1odecg3p + ACP (GLYCEROL-3-P-ACYLTRANSFER-RXN) G3PAT161 glycerol-3-phosphate acyltransferase (C16:1) [c] : glyc3p + hdeACP --> 1hdec9eg3p + ACP (GLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) G3PAT160 glycerol-3-phosphate acyltransferase (C16:0) [c] : glyc3p + palmACP --> 1hdecg3p + ACP (GLYCEROL-3-P-ACYLTRANSFER-RXN) G3PAT141 glycerol-3-phosphate acyltransferase (C14:1) [c] : glyc3p + tdeACP --> 1tdec7eg3p + ACP (GLYCEROL-3-P-ACYLTRANSFER-RXN) G3PAT140 glycerol-3-phosphate acyltransferase (C14:0) [c] : glyc3p + myrsACP --> 1tdecg3p + ACP (GLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) G3PAT120 glycerol-3-phosphate acyltransferase (C12:0) [c] : ddcaACP + glyc3p --> 1ddecg3p + ACP (GLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) G2PPpp glycerol 2-phosphate phosphatase (periplasmic) [p] : glyc2p + h2o --> glyc + pi G1SAT glutamate-1-semialdehyde aminotransferase [c] : glu1sa <==> 5aop (GSAAMINOTRANS-RXN) G1Ptex D-glucose 1-phosphate transport via diffusion g1p[e] <==> g1p[p] (:EXCHANGE) G1PTT glucose-1-phosphate thymidylyltransferase [c] : dttp + g1p + h --> dtdpglu + ppi (DTDPGLUCOSEPP-RXN) ((LEFT REMOVE PROTON)) G1PPpp Glucose-1-phosphatase [p] : g1p + h2o --> glc-D + pi G1PACT glucosamine-1-phosphate N-acetyltransferase [c] : accoa + gam1p --> acgam1p + coa + h (2.3.1.157-RXN) ((RIGHT REMOVE PROTON)) FUMtex Fumarate transport via diffusion (extracellular to periplasm) fum[e] <==> fum[p] (:EXCHANGE) FUMt2_3pp Fumarate transport via proton symport (3 H) (periplasm) fum[p] + (3) h[p] --> fum[c] + (3) h[c] (TRANS-RXN-202) FUMt2_2pp Fumarate transport via proton symport (2 H) (periplasm) fum[p] + (2) h[p] --> fum[c] + (2) h[c] (TRANS-RXN-202) FUM fumarase [c] : fum + h2o <==> mal-L (FUMHYDR-RXN) FUCtpp L-fucose transport via proton symport (periplasm) fuc-L[p] + h[p] <==> fuc-L[c] + h[c] (TRANS-RXN-20) FUCtex L-fucose transport via diffusion (extracellular to periplasm) fuc-L[e] <==> fuc-L[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) FTHFD formyltetrahydrofolate deformylase [c] : 10fthf + h2o --> for + h + thf (FORMYLTHFDEFORMYL-RXN) ((RIGHT REMOVE PROTON)) FRUtex D-fructose transport via diffusion (extracellular to periplasm) fru[e] <==> fru[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) FRUptspp D-fructose transport via PEP:Pyr PTS (periplasm) fru[p] + pep[c] --> f1p[c] + pyr[c] (TRANS-RXN-158) FRUpts2pp Fructose transport via PEP:Pyr PTS (f6p generating) (periplasm) fru[p] + pep[c] --> f6p[c] + pyr[c] (TRANS-RXN-158A) FRUURtex D-fructuronate transport via diffusion (extracellular) fruur[e] <==> fruur[p] (:EXCHANGE) FRUURt2rpp D-fructuronate transport via proton symport, reversible (periplasm) fruur[p] + h[p] <==> fruur[c] + h[c] (TRANS-RXN-81) FRULYStex fructoselysine transporter via diffusion (extracellular) frulys[e] <==> frulys[p] (:EXCHANGE) FRULYSt2rpp Fructoselysine cationic transporter frulys[p] + h[p] <==> frulys[c] + h[c] FRULYSK Fructoselysine Kinase [c] : atp + frulys --> adp + frulysp + h (RXN0-962) ((RIGHT REMOVE PROTON)) FRULYSDG Fructoselysine phosphate deglycase [c] : frulysp + h2o <==> g6p + lys-L (RXN0-963) FRUK fructose-1-phosphate kinase [c] : atp + f1p --> adp + fdp + h (1PFRUCTPHOSN-RXN) ((RIGHT REMOVE PROTON)) FRD3 fumarate reductase [c] : 2dmmql8 + fum --> 2dmmq8 + succ FRD2 fumarate reductase [c] : fum + mql8 --> mqn8 + succ FORtppi formate transport via diffusion (cytoplasm to periplasm) for[c] --> for[p] (TRANS-RXN-1) FORtex formate transport via diffusion (extracellular to periplasm) for[e] <==> for[p] (:EXCHANGE) FORt2pp formate transport via proton symport (uptake only, periplasm) for[p] + h[p] --> for[c] + h[c] (TRANS-RXN-1) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FMNRx2 FMN reductase [c] : fmn + h + nadph --> fmnh2 + nadp (FMNREDUCT-RXN) (:EXPANDED-RXN-MATCH) FMNRx FMN reductase [c] : fmn + h + nadh --> fmnh2 + nad (FMNREDUCT-RXN) (:EXPANDED-RXN-MATCH) FMNAT FMN adenylyltransferase [c] : atp + fmn + h --> fad + ppi (FADSYN-RXN) ((LEFT REMOVE PROTON)) FMETTRS Methionyl-tRNA formyltransferase [c] : 10fthf + mettrna --> fmettrna + h + thf FLVR(NAD) flavin reductase (NAD) [c] : h + nadh + ribflv --> nad + rbflvrd FLVR flavin reductase [c] : h + nadph + ribflv --> nadp + rbflvrd (|NADPH-DEHYDROGENASE-(FLAVIN)-RXN|) (:METACYC (LEFT REMOVE PROTON)) FLDR flavodoxin reductase (NADPH) [c] : fldox + h + nadph --> fldrd + nadp (FLAVONADPREDUCT-RXN) FHL_1p3 Formate-hydrogen lyase (proton translocating) for[c] + (2.3) h[c] --> co2[c] + (1.3) h[p] + h2[c] (FHLMULTI-RXN) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FHL Formate-hydrogen lyase [c] : for + h --> co2 + h2 (FHLMULTI-RXN) ((LEFT REMOVE PROTON)) FFSD beta-fructofuranosidase [c] : h2o + suc6p --> fru + g6p (3.2.1.26-RXN) (:METACYC) FEROpp ferroxidase [p] : (4) fe2 + (4) h + o2 --> (4) fe3 + (2) h2o FEOXAMtonex ferroxamine transport via ton system (extracellular) feoxam[e] + h[p] --> feoxam[p] + h[c] (:UNMAPPED-CPDS) FEOXAMexs ferroxamine Fe3-loading reaction (spontaneous) [e] : fe3 + feoxam-un --> feoxam (:UNMAPPED-CPDS) FEOXAMabcpp ferroxamine transport via ABC system (periplasm) atp[c] + feoxam[p] + h2o[c] --> adp[c] + feoxam[c] + h[c] + pi[c] (:UNMAPPED-CPDS) FEOXAMUtpp ferroxamine (minus Fe3) secretion (to periplasm) feoxam-un[c] + h[p] --> feoxam-un[p] + h[c] (:UNMAPPED-CPDS) FEOXAMUtex ferroxamine (minus Fe3) secretion (to extracellular) feoxam-un[p] + h[p] --> feoxam-un[e] + h[c] (:UNMAPPED-CPDS) FEOXAMR3 ferroxamine reductase [c] : (2) feoxam + rbflvrd --> (2) fe2 + (2) feoxam-un + (2) h + ribflv (:UNMAPPED-CPDS) FEOXAMR2 ferroxamine reductase [c] : (2) feoxam + fmnh2 --> (2) fe2 + (2) feoxam-un + fmn + (2) h (:UNMAPPED-CPDS) FEOXAMR1 ferroxamine reductase [c] : fadh2 + (2) feoxam --> fad + (2) fe2 + (2) feoxam-un + (2) h (:UNMAPPED-CPDS) FEENTERtpp enterochelin transport (secretion) enter[c] + h[p] --> enter[p] + h[c] FEENTERtonex Fe-enterobactin transport via ton system (extracellular) feenter[e] + h[p] --> feenter[p] + h[c] (RXN0-1682) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FEENTERtex enterochelin transport (secretion periplasm) enter[p] + h[p] --> enter[e] + h[c] FEENTERexs enterobactin Fe(III) binding (spontaneous) [e] : enter + fe3 --> feenter FEENTERabcpp Fe-enterobactin transport via ABC system (periplasm) atp[c] + feenter[p] + h2o[c] --> adp[c] + feenter[c] + h[c] + pi[c] (ABC-10-RXN) ((RIGHT REMOVE PROTON)) FEENTERR3 Fe-enterobactin reduction (Fe(III)-unloading) [c] : (2) feenter + rbflvrd --> (2) enter + (2) fe2 + (2) h + ribflv FEENTERR2 Fe-enterobactin reduction (Fe(III)-unloading) [c] : (2) feenter + fmnh2 --> (2) enter + (2) fe2 + fmn + (2) h FEENTERR1 Fe-enterobactin reduction (Fe(III)-unloading) [c] : fadh2 + (2) feenter --> (2) enter + fad + (2) fe2 + (2) h FECRMtonex ferrichrome transport via ton system (extracellular) fecrm[e] + h[p] --> fecrm[p] + h[c] (:UNMAPPED-CPDS) FECRMexs ferrichrome Fe(III)-loading reaction (spontaneous) [e] : fe3 + fecrm-un --> fecrm (:UNMAPPED-CPDS) FECRMabcpp ferrichrome transport via ABC system (periplasm) atp[c] + fecrm[p] + h2o[c] --> adp[c] + fecrm[c] + h[c] + pi[c] (:UNMAPPED-CPDS) FECRMUtpp ferrichrome (minus Fe) secretion (to periplasm) fecrm-un[c] + h[p] --> fecrm-un[p] + h[c] (:UNMAPPED-CPDS) FECRMUtex ferrichrome (minus Fe) secretion (to extracellular) fecrm-un[p] + h[p] --> fecrm-un[e] + h[c] (:UNMAPPED-CPDS) FECRMR3 Ferrichrome reductase [c] : (2) fecrm + rbflvrd --> (2) fe2 + (2) fecrm-un + (2) h + ribflv (:UNMAPPED-CPDS) FECRMR2 Ferrichrome reductase [c] : (2) fecrm + fmnh2 --> (2) fe2 + (2) fecrm-un + fmn + (2) h (:UNMAPPED-CPDS) FECRMR1 Ferrichrome reductase [c] : fadh2 + (2) fecrm --> fad + (2) fe2 + (2) fecrm-un + (2) h (:UNMAPPED-CPDS) FE3tex iron (III) transport via diffusion (extracellular to periplasm) fe3[e] <==> fe3[p] (:EXCHANGE) FE3Ri Fe(III) reduction [c] : fadh2 + (2) fe3 --> fad + (2) fe2 + (2) h FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) fe3hox[e] + h[p] --> fe3hox[p] + h[c] (RXN0-1701) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FE3HOXexs Fe(III) hydroxamate Fe-loading reaction (spontaneaous) [e] : fe3 + fe3hox-un --> fe3hox (:UNMAPPED-CPDS) FE3HOXabcpp ferric-dicitrate transport via ABC system (periplasm) atp[c] + fe3hox[p] + h2o[c] --> adp[c] + fe3hox[c] + h[c] + pi[c] (ABC-11-RXN) ((RIGHT REMOVE PROTON)) FE3HOXUtpp Fe(III)hydroxamate unloaded secretion (extracellular) fe3hox-un[p] + h[p] --> fe3hox-un[e] + h[c] (:UNMAPPED-CPDS) FE3HOXUtex Fe(III)hydroxamate unloaded secretion fe3hox-un[c] + h[p] --> fe3hox-un[p] + h[c] (:UNMAPPED-CPDS) FE3HOXR3 Fe(III)hydroxamate reductase [c] : (2) fe3hox + rbflvrd --> (2) fe2 + (2) fe3hox-un + (2) h + ribflv (:UNMAPPED-CPDS) FE3HOXR2 Fe(III)hydroxamate reductase [c] : (2) fe3hox + fmnh2 --> (2) fe2 + (2) fe3hox-un + fmn + (2) h (:UNMAPPED-CPDS) FE3HOXR1 Fe(III)hydroxamate reductase [c] : fadh2 + (2) fe3hox --> fad + (2) fe2 + (2) fe3hox-un + (2) h (:UNMAPPED-CPDS) FE3DHBZStonex ferric 2,3-dihydroxybenzoylserine transport via ton system (extracellular) fe3dhbzs[e] + h[p] --> fe3dhbzs[p] + h[c] (RXN0-1721) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FE3DHBZSabcpp ferric 2,3-dihydroxybenzoylserine transport via ABC system (periplasm) atp[c] + fe3dhbzs[p] + h2o[c] --> adp[c] + fe3dhbzs[c] + h[c] + pi[c] FE3DHBZR release of Fe(III) from ferric 2,3-dihydroxybenzoylserine [c] : fe3dhbzs --> 23dhbzs + fe3 FE3DCITtonex ferric-dicitrate transport via ton system (extracellular) fe3dcit[e] + h[p] --> fe3dcit[p] + h[c] (RXN0-1684) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) FE3DCITabcpp iron transport from ferric-dicitrate via ABC system (periplasm) atp[c] + fe3dcit[p] + h2o[c] --> adp[c] + (2) cit[c] + fe3[c] + h[c] + pi[c] FE2tpp iron (+2) transport in/out via permease (no H+) fe2[p] <==> fe2[c] (TRANS-RXN-8) FE2tex iron (II) transport via diffusion (extracellular to periplasm) fe2[e] <==> fe2[p] (:EXCHANGE) FE2t2pp iron (II) transport in via proton symport (periplasm) fe2[p] + h[p] --> fe2[c] + h[c] (RXN0-2421) FE2abcpp iron (II) transport via ABC system (periplasm) atp[c] + fe2[p] + h2o[c] --> adp[c] + fe2[c] + h[c] + pi[c] FDMO6 FMNH2-dependent monooxygenase (sulfoacetate) [c] : fmnh2 + o2 + sulfac --> fmn + glx + h + h2o + so3 FDMO4 FMNH2-dependent monooxygenase (butanesulfonate) [c] : butso3 + fmnh2 + o2 --> btal + fmn + h + h2o + so3 FDMO3 FMNH2-dependent monooxygenase (ethanesulfonate) [c] : ethso3 + fmnh2 + o2 --> acald + fmn + h + h2o + so3 FDMO2 FMNH2-dependent monooxygenase (methanesulfonate) [c] : fmnh2 + mso3 + o2 --> fald + fmn + h + h2o + so3 FDMO FMNH2-dependent monooxygenase [c] : fmnh2 + isetac + o2 --> fmn + gcald + h + h2o + so3 FDH5pp Formate Dehydrogenase (menaquinone-8) (periplasm) for[p] + (2) h[c] + mqn8[c] --> co2[c] + h[p] + mql8[c] FDH4pp formate dehydrogenase (quinone-8) (periplasm) for[p] + (2) h[c] + q8[c] --> co2[c] + h[p] + q8h2[c] FCLT Ferrochelatase [c] : fe2 + ppp9 --> (2) h + pheme (PROTOHEMEFERROCHELAT-RXN) FCLPA L-fuculose 1-phosphate aldolase [c] : fc1p <==> dhap + lald-L (FUCPALDOL-RXN) FCLK L-fuculokinase [c] : atp + fcl-L --> adp + fc1p + h (FUCULOKIN-RXN) ((RIGHT REMOVE PROTON)) FCI L-fucose isomerase [c] : fuc-L <==> fcl-L (FUCISOM-RXN) FBP fructose-bisphosphatase [c] : fdp + h2o --> f6p + pi (F16BDEPHOS-RXN) FBA fructose-bisphosphate aldolase [c] : fdp <==> dhap + g3p (F16ALDOLASE-RXN) FALGTHLs formaldehyde glutathione ligase (spontaneous) [c] : fald + gthrd <==> hmgth (RXN-2961) FALDtpp formaldehyde transport via diffusion (periplasm) fald[p] <==> fald[c] (:EXCHANGE) FALDtex formaldehyde transport via diffusion (extracellular to periplasm) fald[e] <==> fald[p] (:EXCHANGE) FALDH2 formaldehyde dehydrogenase [c] : hmgth + nad <==> Sfglutth + h + nadh (RXN-2962) (:EXPANDED-RXN-MATCH) FADRx2 FAD reductase [c] : fad + h + nadph --> fadh2 + nadp FADRx FAD reductase [c] : fad + h + nadh --> fadh2 + nad FACOAL80t2pp fatty-acid-CoA ligase (octanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + octa[p] --> amp[c] + h[c] + occoa[c] + ppi[c] FACOAL60t2pp fatty-acid-CoA ligase (hexanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + hxa[p] --> amp[c] + h[c] + hxcoa[c] + ppi[c] FACOAL181t2pp fatty-acid-CoA ligase (octadecenoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + ocdcea[p] --> amp[c] + h[c] + odecoa[c] + ppi[c] FACOAL180t2pp fatty-acid-CoA ligase (octadecanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + ocdca[p] --> amp[c] + h[c] + ppi[c] + stcoa[c] FACOAL161t2pp fatty-acid-CoA ligase (hexadecenoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + hdcea[p] --> amp[c] + h[c] + hdcoa[c] + ppi[c] FACOAL160t2pp fatty-acid-CoA ligase (hexadecanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + hdca[p] --> amp[c] + h[c] + pmtcoa[c] + ppi[c] FACOAL141t2pp fatty-acid-CoA ligase (tetradecenoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + ttdcea[p] --> amp[c] + h[c] + ppi[c] + tdecoa[c] (:UNMAPPED-CPDS) FACOAL140t2pp fatty-acid-CoA ligase (tetradecanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + h[p] + ttdca[p] --> amp[c] + h[c] + ppi[c] + tdcoa[c] (:UNMAPPED-CPDS) FACOAL120t2pp fatty-acid-CoA ligase (dodecanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + ddca[p] + h[p] --> amp[c] + ddcacoa[c] + h[c] + ppi[c] FACOAL100t2pp fatty-acid-CoA ligase (decanoate transport via vectoral Co-A coupling) atp[c] + coa[c] + dca[p] + h[p] --> amp[c] + dcacoa[c] + h[c] + ppi[c] FACOAE80 fatty-acid-CoA thioesterase (octanoate) [c] : h2o + occoa --> coa + h + octa FACOAE60 fatty-acid-CoA thioesterase (hexanoate) [c] : h2o + hxcoa --> coa + h + hxa FACOAE181 fatty-acid-CoA thioesterase (octadecenoate) [c] : h2o + odecoa --> coa + h + ocdcea FACOAE180 fatty-acid-CoA thioesterase (octadecanoate) [c] : h2o + stcoa --> coa + h + ocdca FACOAE161 fatty-acid-CoA thioesterase (hexadecenoate) [c] : h2o + hdcoa --> coa + h + hdcea (PALMITOYL-COA-HYDROLASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) FACOAE160 fatty-acid-CoA thioesterase (hexadecanoate) [c] : h2o + pmtcoa --> coa + h + hdca (PALMITOYL-COA-HYDROLASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) FACOAE141 fatty-acid-CoA thioesterase (tetradecenoate) [c] : h2o + tdecoa --> coa + h + ttdcea (:UNMAPPED-CPDS) FACOAE140 fatty-acid-CoA thioesterase (tetradecanoate) [c] : h2o + tdcoa --> coa + h + ttdca (:UNMAPPED-CPDS) FACOAE120 fatty-acid-CoA thioesterase (dodecanoate) [c] : ddcacoa + h2o --> coa + ddca + h FACOAE100 fatty-acid-CoA thioesterase (decanoate) [c] : dcacoa + h2o --> coa + dca + h (3.1.2.18-RXN 3.1.2.19-RXN ACYL-COA-HYDROLASE-RXN) (:METACYC :EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) FA80ACPHi fatty-acyl-ACP hydrolase [c] : h2o + ocACP --> ACP + h + octa FA161ACPHi fatty-acyl-ACP hydrolase [c] : h2o + hdeACP --> ACP + h + hdcea FA160ACPHi fatty-acyl-ACP hydrolase [c] : h2o + palmACP --> ACP + h + hdca FA141ACPHi fatty-acyl-ACP hydrolase [c] : h2o + tdeACP --> ACP + h + ttdcea (:UNMAPPED-CPDS) FA140ACPHi fatty-acyl-ACP hydrolase [c] : h2o + myrsACP --> ACP + h + ttdca (:UNMAPPED-CPDS) FA120ACPHi fatty-acyl-ACP hydrolase [c] : ddcaACP + h2o --> ACP + ddca + h FA100ACPHi fatty-acyl-ACP hydrolase [c] : dcaACP + h2o --> ACP + dca + h F6Ptex fructose 6-phosphate transport via diffusion (extracellular to periplasm) f6p[e] <==> f6p[p] (:EXCHANGE) F6Pt6_2pp Fructose-6-phosphate transport via phosphate antiport (periplasm) f6p[p] + (2) pi[c] --> f6p[c] + (2) pi[p] F6PP D-fructose 6-phosphate phosphatase [c] : f6p + h2o --> fru + pi (SUGAR-PHOSPHATASE-RXN) (:EXPANDED-RXN-MATCH) F6PA fructose 6-phosphate aldolase [c] : f6p <==> dha + g3p (RXN0-313) EX_zn2(e) Zinc exchange [e] : zn2 <==> EX_xylu-L(e) L-Xylulose exchange [e] : xylu-L <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_xyl-D(e) D-Xylose exchange [e] : xyl-D <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_xtsn(e) Xanthosine exchange [e] : xtsn <==> EX_xmp(e) Xanthosine 5'-phosphate exchange [e] : xmp <==> EX_xan(e) Xanthine exchange [e] : xan <==> EX_val-L(e) L-Valine exchange [e] : val-L <==> EX_uri(e) Uridine exchange [e] : uri <==> EX_urea(e) Urea exchange [e] : urea <==> EX_ura(e) Uracil exchange [e] : ura <==> EX_ump(e) UMP exchange [e] : ump <==> EX_udpglcur(e) UDP-D-glucuronate exchange [e] : udpglcur <==> EX_udpgal(e) UDPgalactose exchange [e] : udpgal <==> EX_udpg(e) UDPglucose exchange [e] : udpg <==> EX_udpacgal(e) UDP-N-acetyl-D-galactosamine exchange [e] : udpacgal <==> EX_uacgam(e) UDP-N-acetyl-D-glucosamine exchange [e] : uacgam <==> EX_tyrp(e) Phosphotyrosine exchange [e] : tyrp <==> EX_tyr-L(e) L-Tyrosine exchange [e] : tyr-L <==> EX_tym(e) Tyramine exchange [e] : tym <==> EX_ttdcea(e) tetradecenoate (n-C14:1) exchange [e] : ttdcea <==> (:UNMAPPED-CPDS) EX_ttdca(e) tetradecanoate (n-C14:0) exchange [e] : ttdca <==> (:UNMAPPED-CPDS) EX_tsul(e) Thiosulfate exchange [e] : tsul <==> EX_trp-L(e) L-Tryptophan exchange [e] : trp-L <==> EX_tre(e) Trehalose exchange [e] : tre <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_tmao(e) Trimethylamine N-oxide exchange [e] : tmao <==> EX_tma(e) Trimethylamine exchange [e] : tma <==> EX_thymd(e) Thymidine exchange [e] : thymd <==> EX_thrp(e) L-Threonine O-3-phosphate exchange [e] : thrp <==> EX_thr-L(e) L-Threonine exchange [e] : thr-L <==> EX_thm(e) Thiamin exchange [e] : thm <==> EX_tcynt(e) Thiocyanate exchange [e] : tcynt <==> EX_taur(e) Taurine exchange [e] : taur <==> EX_tartr-L(e) L-tartrate exchange [e] : tartr-L <==> EX_sulfac(e) sulfoacetate exchange [e] : sulfac <==> EX_sucr(e) Sucrose exchange [e] : sucr <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_succ(e) Succinate exchange [e] : succ <==> EX_spmd(e) Spermidine exchange [e] : spmd <==> EX_so4(e) Sulfate exchange [e] : so4 <==> EX_so3(e) Sulfite exchange [e] : so3 <==> EX_so2(e) sulfur dioxide exchange [e] : so2 <==> EX_skm(e) Shikimate exchange [e] : skm <==> EX_ser-L(e) L-Serine exchange [e] : ser-L <==> EX_ser-D(e) D-Serine exchange [e] : ser-D <==> EX_sbt-D(e) D-Sorbitol exchange [e] : sbt-D <==> EX_rmn(e) L-Rhamnose exchange [e] : rmn <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_rib-D(e) D-Ribose exchange [e] : rib-D <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_r5p(e) alpha-D-Ribose 5-phosphate exchange [e] : r5p <==> EX_pyr(e) Pyruvate exchange [e] : pyr <==> EX_ptrc(e) Putrescine exchange [e] : ptrc <==> EX_pser-L(e) O-Phospho-L-serine exchange [e] : pser-L <==> EX_progly(e) L-Prolinylglycine exchange [e] : progly <==> (:UNMAPPED-CPDS) EX_pro-L(e) L-Proline exchange [e] : pro-L <==> EX_ppt(e) Phosphonate exchange [e] : ppt <==> EX_pppn(e) Phenylpropanoate exchange [e] : pppn <==> EX_ppal(e) Propanal exchange [e] : ppal <==> EX_pnto-R(e) (R)-Pantothenate exchange [e] : pnto-R <==> EX_pi(e) Phosphate exchange [e] : pi <==> EX_pheme(e) Protoheme exchange [e] : pheme <==> EX_phe-L(e) L-Phenylalanine exchange [e] : phe-L <==> EX_peamn(e) Phenethylamine exchange [e] : peamn <==> EX_pacald(e) Phenylacetaldehyde exchange [e] : pacald <==> EX_orn(e) Ornithine exchange [e] : orn <==> EX_octa(e) octanoate (n-C8:0) exchange [e] : octa <==> EX_ocdcea(e) octadecenoate (n-C18:1) exchange [e] : ocdcea <==> EX_ocdca(e) octadecanoate (n-C18:0) exchange [e] : ocdca <==> EX_o2s(e) Superoxide anion exchange [e] : o2s <==> EX_o2(e) O2 exchange [e] : o2 <==> EX_o16a4colipa(e) (O16 antigen)x4 core oligosaccharide lipid A exchange [e] : o16a4colipa <==> (:UNMAPPED-CPDS) EX_no3(e) Nitrate exchange [e] : no3 <==> EX_no2(e) Nitrite exchange [e] : no2 <==> EX_no(e) Nitric oxide exchange [e] : no <==> EX_nmn(e) NMN exchange [e] : nmn <==> EX_ni2(e) Ni2+ exchange [e] : ni2 <==> EX_nh4(e) Ammonia exchange [e] : nh4 <==> EX_nac(e) Nicotinate exchange [e] : nac <==> EX_na1(e) Sodium exchange [e] : na1 <==> EX_n2o(e) Nitrous oxide exchange [e] : n2o <==> EX_mso3(e) methanesulfonate exchange [e] : mso3 <==> EX_mobd(e) Molybdate exchange [e] : mobd <==> EX_mnl(e) D-Mannitol exchange [e] : mnl <==> EX_mn2(e) Mn2+ exchange [e] : mn2 <==> EX_mmet(e) S-Methyl-L-methionine exchange [e] : mmet <==> EX_minohp(e) myo-Inositol hexakisphosphate exchange [e] : minohp <==> EX_mg2(e) Mg exchange [e] : mg2 <==> EX_metox(e) L-Methionine S-oxide exchange [e] : metsox-S-L <==> EX_met-r-ox-L(e) L-methionine-R-sulfoxide exchange [e] : metsox-R-L <==> (:UNMAPPED-CPDS) EX_met-L(e) L-Methionine exchange [e] : met-L <==> EX_met-D(e) D-Methionine exchange [e] : met-D <==> EX_melib(e) Melibiose exchange [e] : melib <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_manglyc(e) 2(alpha-D-Mannosyl)-D-glycerate exchange [e] : manglyc <==> EX_man6p(e) D-Mannose 6-phosphate exchange [e] : man6p <==> EX_man(e) D-Mannose exchange [e] : man <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_maltttr(e) Maltotetraose exchange [e] : maltttr <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_malttr(e) Maltotriose exchange [e] : malttr <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_maltpt(e) Maltopentaose exchange [e] : maltpt <==> EX_malthx(e) Maltohexaose exchange [e] : malthx <==> EX_malt(e) Maltose exchange [e] : malt <==> (RXN0-1741 RXN0-2543) EX_mal-L(e) L-Malate exchange [e] : mal-L <==> EX_lyx-L(e) L-Lyxose exchange [e] : lyx-L <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_lys-L(e) L-Lysine exchange [e] : lys-L <==> EX_lipa_cold(e) cold adapted KDO(2)-lipid (A) exchange [e] : lipa_cold <==> EX_lipa(e) KDO(2)-lipid (A) exchange [e] : lipa <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_leu-L(e) L-Leucine exchange [e] : leu-L <==> EX_lcts(e) Lactose exchange [e] : lcts <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_lac-L(e) L-Lactate exchange [e] : lac-L <==> EX_lac-D(e) D-lactate exchange [e] : lac-D <==> EX_kdo2lipid4(e) KDO(2)-lipid IV(A) exchange [e] : kdo2lipid4 <==> EX_k(e) K+ exchange [e] : k <==> EX_isetac(e) Isethionic acid exchange [e] : isetac <==> EX_ins(e) Inosine exchange [e] : ins <==> EX_inost(e) myo-Inositol exchange [e] : inost <==> EX_indole(e) Indole exchange [e] : indole <==> EX_imp(e) IMP exchange [e] : imp <==> EX_ile-L(e) L-Isoleucine exchange [e] : ile-L <==> EX_idon-L(e) L-Idonate exchange [e] : idon-L <==> EX_hxan(e) Hypoxanthine exchange [e] : hxan <==> EX_hxa(e) Hexanoate (n-C6:0) exchange [e] : hxa <==> EX_hom-L(e) L-Homoserine exchange [e] : hom-L <==> EX_his-L(e) L-Histidine exchange [e] : his-L <==> EX_hg2(e) Hg2+ exchange [e] : hg2 <==> EX_hdcea(e) hexadecenoate (n-C16:1) exchange [e] : hdcea <==> EX_hdca(e) Hexadecanoate (n-C16:0) exchange [e] : hdca <==> EX_halipa(e) hepta-acylated KDO(2)-lipid (A) exchange [e] : halipa <==> EX_hacolipa(e) hepta-acylated core oligosaccharide lipid A (E. coli) exchange [e] : hacolipa <==> (:UNMAPPED-CPDS) EX_h2s(e) Hydrogen sulfide exchange [e] : h2s <==> EX_h2o2(e) Hydrogen peroxide exchange [e] : h2o2 <==> EX_h2o(e) H2O exchange [e] : h2o <==> EX_h2(e) H2 exchange [e] : h2 <==> EX_h(e) H+ exchange [e] : h <==> EX_gua(e) Guanine exchange [e] : gua <==> EX_gtp(e) GTP exchange [e] : gtp <==> EX_gthrd(e) Reduced glutathione exchange [e] : gthrd <==> EX_gthox(e) Oxidized glutathione exchange [e] : gthox <==> EX_gsn(e) Guanosine exchange [e] : gsn <==> EX_gmp(e) GMP exchange [e] : gmp <==> EX_glyclt(e) Glycolate exchange [e] : glyclt <==> EX_glyc3p(e) Glycerol 3-phosphate exchange [e] : glyc3p <==> EX_glyc2p(e) Glycerol 2-phosphate exchange [e] : glyc2p <==> EX_glyc-R(e) (R)-Glycerate exchange [e] : glyc-R <==> EX_glyc(e) Glycerol exchange [e] : glyc <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_glyb(e) Glycine betaine exchange [e] : glyb <==> EX_glyald(e) D-Glyceraldehyde exchange [e] : glyald <==> EX_gly(e) Glycine exchange [e] : gly <==> EX_glu-L(e) L-Glutamate exchange [e] : glu-L <==> EX_gln-L(e) L-Glutamine exchange [e] : gln-L <==> EX_glcur1p(e) D-Glucuronate 1-phosphate exchange [e] : glcur1p <==> EX_glcur(e) D-Glucuronate exchange [e] : glcur <==> EX_glcr(e) D-Glucarate exchange [e] : glcr <==> EX_glcn(e) D-Gluconate exchange [e] : glcn <==> EX_glc(e) D-Glucose exchange [e] : glc-D <==> (RXN0-1683) EX_gdp(e) GDP exchange [e] : gdp <==> EX_gbbtn(e) gamma-butyrobetaine exchange [e] : gbbtn <==> EX_gam6p(e) D-Glucosamine 6-phosphate exchange [e] : gam6p <==> EX_gam(e) D-Glucosamine exchange [e] : gam <==> EX_galur(e) D-Galacturonate exchange [e] : galur <==> EX_galt(e) Galactitol exchange [e] : galt <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_galctn-D(e) D-Galactonate exchange [e] : galctn-D <==> EX_galct-D(e) D-Galactarate exchange [e] : galct-D <==> EX_gal1p(e) alpha-D-Galactose 1-phosphate exchange [e] : gal1p <==> EX_gal-bD(e) beta D-Galactose exchange [e] : gal-bD <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_gal(e) D-Galactose exchange [e] : gal <==> (RXN0-1683) EX_g6p(e) D-Glucose 6-phosphate exchange [e] : g6p <==> EX_g3ps(e) Glycerophosphoserine exchange [e] : g3ps <==> (:UNMAPPED-CPDS) EX_g3pi(e) sn-Glycero-3-phospho-1-inositol exchange [e] : g3pi <==> EX_g3pg(e) Glycerophosphoglycerol exchange [e] : g3pg <==> EX_g3pe(e) sn-Glycero-3-phosphoethanolamine exchange [e] : g3pe <==> EX_g3pc(e) sn-Glycero-3-phosphocholine exchange [e] : g3pc <==> EX_g1p(e) D-Glucose 1-phosphate exchange [e] : g1p <==> EX_fum(e) Fumarate exchange [e] : fum <==> EX_fuc-L(e) L-Fucose exchange [e] : fuc-L <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_fruur(e) D-Fructuronate exchange [e] : fruur <==> EX_frulys(e) fructoselysine exchange [e] : frulys <==> EX_fru(e) D-Fructose exchange [e] : fru <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_for(e) Formate exchange [e] : for <==> EX_feoxam-un(e) ferroxamine minus Fe(3) exchange [e] : feoxam-un <==> (:UNMAPPED-CPDS) EX_feoxam(e) ferroxamine exchange [e] : feoxam <==> (:UNMAPPED-CPDS) EX_feenter(e) Fe-enterobactin exchange [e] : feenter <==> (RXN0-1682 RXN0-2181) EX_fecrm-un(e) Ferrichrome minus Fe(III) exchange [e] : fecrm-un <==> (:UNMAPPED-CPDS) EX_fecrm(e) Ferrichrome exchange [e] : fecrm <==> (:UNMAPPED-CPDS) EX_fe3hox-un(e) Fe(III)hydoxamate, unloaded exchange [e] : fe3hox-un <==> (:UNMAPPED-CPDS) EX_fe3hox(e) Fe(III)hydroxamate exchange [e] : fe3hox <==> (RXN0-1701 RXN0-2241) EX_fe3dhbzs(e) ferric 2,3-dihydroxybenzoylserine exchange [e] : fe3dhbzs <==> (RXN0-1721) EX_fe3dcit(e) Fe(III)dicitrate exchange [e] : fe3dcit <==> (RXN0-1684 RXN0-2261) EX_fe3(e) Fe3+ exchange [e] : fe3 <==> EX_fe2(e) Fe2+ exchange [e] : fe2 <==> EX_fald(e) Formaldehyde exchange [e] : fald <==> EX_f6p(e) D-fructose 6-phosphate exchange [e] : f6p <==> EX_etoh(e) Ethanol exchange [e] : etoh <==> EX_ethso3(e) ethanesulfonate exchange [e] : ethso3 <==> EX_etha(e) Ethanolamine exchange [e] : etha <==> EX_enter(e) Enterochelin exchange [e] : enter <==> EX_enlipa(e) phosphoethanolamine KDO(2)-lipid (A) exchange [e] : enlipa <==> EX_eca4colipa(e) (enterobacterial common antigen)x4 core oligosaccharide lipid A exchange [e] : eca4colipa <==> (:UNMAPPED-CPDS) EX_duri(e) Deoxyuridine exchange [e] : duri <==> EX_dump(e) dUMP exchange [e] : dump <==> EX_dtmp(e) dTMP exchange [e] : dtmp <==> EX_dopa(e) Dopamine exchange [e] : dopa <==> EX_dmso(e) Dimethyl sulfoxide exchange [e] : dmso <==> EX_dms(e) Dimethyl sulfide exchange [e] : dms <==> EX_din(e) Deoxyinosine exchange [e] : din <==> EX_dimp(e) dIMP exchange [e] : dimp <==> EX_dha(e) Dihydroxyacetone exchange [e] : dha <==> EX_dgsn(e) Deoxyguanosine exchange [e] : dgsn <==> EX_dgmp(e) dGMP exchange [e] : dgmp <==> EX_ddca(e) Dodecanoate (n-C12:0) exchange [e] : ddca <==> EX_dcyt(e) Deoxycytidine exchange [e] : dcyt <==> EX_dcmp(e) dCMP exchange [e] : dcmp <==> EX_dca(e) Decanoate (n-C10:0) exchange [e] : dca <==> EX_damp(e) dAMP exchange [e] : damp <==> EX_dad-2(e) Deoxyadenosine exchange [e] : dad-2 <==> EX_cytd(e) Cytidine exchange [e] : cytd <==> EX_cys-L(e) L-Cysteine exchange [e] : cys-L <==> EX_cys-D(e) D-Cysteine exchange [e] : cys-D <==> EX_cynt(e) Cyanate exchange [e] : cynt <==> EX_cyan(e) Hydrogen cyanide exchange [e] : cyan <==> EX_cu2(e) Cu2+ exchange [e] : cu2 <==> EX_cu(e) Cu+ exchange [e] : cu <==> EX_csn(e) Cytosine exchange [e] : csn <==> EX_crn(e) L-Carnitine exchange [e] : crn <==> EX_cpgn-un(e) coprogen unloaded (no Fe(III)) exchange [e] : cpgn-un <==> (:UNMAPPED-CPDS) EX_cpgn(e) coprogen exchange [e] : cpgn <==> (RXN0-1702) EX_colipa(e) core oligosaccharide lipid A exchange [e] : colipa <==> (:UNMAPPED-CPDS) EX_cobalt2(e) Co2+ exchange [e] : cobalt2 <==> EX_co2(e) CO2 exchange [e] : co2 <==> EX_cmp(e) CMP exchange [e] : cmp <==> EX_cl(e) Chloride exchange [e] : cl <==> EX_cit(e) Citrate exchange [e] : cit <==> EX_chol(e) Choline exchange [e] : chol <==> EX_cgly(e) Cys-Gly exchange [e] : cgly <==> (:UNMAPPED-CPDS) EX_cd2(e) Cadmium exchange [e] : cd2 <==> EX_cbl1(e) Cob(I)alamin exchange [e] : cbl1 <==> (RXN0-1565 RXN0-2121) EX_cbi(e) Cobinamide exchange [e] : cbi <==> EX_ca2(e) Calcium exchange [e] : ca2 <==> EX_butso3(e) butanesulfonate exchange [e] : butso3 <==> EX_but(e) Butyrate (n-C4:0) exchange [e] : but <==> EX_asp-L(e) L-Aspartate exchange [e] : asp-L <==> EX_aso3(e) arsenite exchange [e] : aso3 <==> EX_asn-L(e) L-Asparagine exchange [e] : asn-L <==> EX_ascb-L(e) L-Ascorbate exchange [e] : ascb-L <==> EX_arg-L(e) L-Arginine exchange [e] : arg-L <==> EX_arbtn-fe3(e) Aerobactin exchange [e] : arbtn-fe3 <==> (:UNMAPPED-CPDS) EX_arbtn(e) aerobactin minus Fe3 exchange [e] : arbtn <==> EX_arab-L(e) L-Arabinose exchange [e] : arab-L <==> (RXN0-1683) EX_anhgm(e) N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid exchange [e] : anhgm <==> (:UNMAPPED-CPDS) EX_amp(e) AMP exchange [e] : amp <==> EX_alltn(e) Allantoin exchange [e] : alltn <==> EX_all-D(e) D-Allose exchange [e] : all-D <==> (RXN0-1683) (:EXPANDED-RXN-MATCH) EX_alaala(e) D-Alanyl-D-alanine exchange [e] : alaala <==> EX_ala-L(e) L-Alanine exchange [e] : ala-L <==> EX_ala-D(e) D-Alanine exchange [e] : ala-D <==> EX_ala-B(e) beta-Alanine exchange [e] : ala-B <==> EX_akg(e) 2-Oxoglutarate exchange [e] : akg <==> EX_agm(e) Agmatine exchange [e] : agm <==> EX_ag(e) silver exchange [e] : ag <==> EX_adocbl(e) Adenosylcobalamin exchange [e] : adocbl <==> EX_adn(e) Adenosine exchange [e] : adn <==> EX_ade(e) Adenine exchange [e] : ade <==> EX_acser(e) O-Acetyl-L-serine exchange [e] : acser <==> EX_acolipa(e) 4-Amino-4-deoxy-L-arabinose modified core oligosaccharide lipid A exchange [e] : acolipa <==> EX_acnam(e) N-Acetylneuraminate exchange [e] : acnam <==> (RXN0-0) EX_acmum(e) N-Acetylmuramate exchange [e] : acmum <==> EX_acmana(e) N-Acetyl-D-mannosamine exchange [e] : acmana <==> EX_acgam1p(e) N-Acetyl-D-glucosamine 1-phosphate exchange [e] : acgam1p <==> EX_acgam(e) N-Acetyl-D-glucosamine exchange [e] : acgam <==> EX_acgal1p(e) N-Acetyl-D-galactosamine 1-phosphate exchange [e] : acgal1p <==> EX_acgal(e) N-Acetyl-D-galactosamine exchange [e] : acgal <==> EX_acald(e) Acetaldehyde exchange [e] : acald <==> EX_acac(e) Acetoacetate exchange [e] : acac <==> EX_ac(e) Acetate exchange [e] : ac <==> EX_LalaDgluMdapDala(e) L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine exchange [e] : LalaDgluMdapDala <==> (:UNMAPPED-CPDS) EX_LalaDgluMdap(e) L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate exchange [e] : LalaDgluMdap <==> EX_4hoxpacd(e) 4-Hydroxyphenylacetaldehyde exchange [e] : 4hoxpacd <==> EX_4abut(e) 4-Aminobutanoate exchange [e] : 4abut <==> EX_3ump(e) 3'-UMP exchange [e] : 3ump <==> EX_3hpppn(e) 3-(3-hydroxy-phenyl)propionate exchange [e] : 3hpppn <==> EX_3hcinnm(e) 3-hydroxycinnamic acid exchange [e] : 3hcinnm <==> (:UNMAPPED-CPDS) EX_3gmp(e) 3'-GMP exchange [e] : 3gmp <==> EX_3cmp(e) 3'-cmp exchange [e] : 3cmp <==> EX_3amp(e) 3'-AMP exchange [e] : 3amp <==> EX_34dhpac(e) 3,4-Dihydroxyphenylacetaldehyde exchange [e] : 34dhpac <==> EX_2ddglcn(e) 2-Dehydro-3-deoxy-D-gluconate exchange [e] : 2ddglcn <==> EX_26dap-M(e) meso-2,6-Diaminoheptanedioate exchange [e] : 26dap-M <==> EX_23cump(e) 2',3'-Cyclic UMP exchange [e] : 23cump <==> EX_23cgmp(e) 2',3'-Cyclic GMP exchange [e] : 23cgmp <==> EX_23ccmp(e) 2',3'-Cyclic CMP exchange [e] : 23ccmp <==> EX_23camp(e) 2',3'-Cyclic AMP exchange [e] : 23camp <==> EX_23appa 2,3-diaminopropionate exchange [e] : 23dappa <==> EX_15dap(e) 1,5-Diaminopentane exchange [e] : 15dap <==> EX_14glucan(e) 1,4-alpha-D-glucan exchange [e] : 14glucan <==> (RXN0-1683) EX_12ppd-S(e) (S)-Propane-1,2-diol exchange [e] : 12ppd-S <==> EX_12ppd-R(e) (R)-Propane-1,2-diol exchange [e] : 12ppd-R <==> (:UNMAPPED-CPDS) ETOHtex ethanol transport via diffusion (extracellular to periplasm) etoh[e] <==> etoh[p] (:EXCHANGE) ETOHt2rpp ethanol reversible transport via proton symport (periplasm) etoh[p] + h[p] <==> etoh[c] + h[c] ETHSO3tex ethanesulfonate transport via diffusion (extracellular to periplasm) ethso3[e] <==> ethso3[p] (:EXCHANGE) ETHSO3abcpp ethanesulfonate transport via ABC system (periplasm) atp[c] + ethso3[p] + h2o[c] --> adp[c] + ethso3[c] + h[c] + pi[c] (ABC-64-RXN) ((RIGHT REMOVE PROTON)) ETHAtex ethanolamine transport via diffusion (extracellular) etha[e] <==> etha[p] (:EXCHANGE) ETHAt2pp ethanolamine transport in/out via proton symport etha[p] + h[p] <==> etha[c] + h[c] ETHAAL Ethanolamine ammonia-lyase [c] : etha --> acald + nh4 (ETHAMLY-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ENTERES2 Enterochelin Esterase (Fe containing) [c] : feenter + (3) h2o --> (3) 23dhbzs + fe3 + (3) h ENTERES Enterochelin Esterase [c] : enter + (3) h2o --> (3) 23dhbzs + (3) h (RXN0-1661) ((RIGHT REMOVE PROTON)) ENTCS enterochelin synthase [c] : (3) 23dhba + (3) seramp --> (6) amp + enter + (9) h (ENTG-RXN) ((RIGHT REMOVE PROTON)) ENO enolase [c] : 2pg <==> h2o + pep (2PGADEHYDRAT-RXN) ENLIPAtex phosphoethanolamine lipid A transport via vector (periplasm to extracellular) enlipa[p] --> enlipa[e] (:EXCHANGE) EDTXS4 Endotoxin Synthesis (myristoyl transferase) [c] : kdo2lipid4p + myrsACP --> ACP + lipa_cold (MYRPALMTRAN-RXN) EDTXS3 Endotoxin Synthesis (palmitoleoyl ACP) [c] : hdeACP + kdo2lipid4 --> ACP + kdo2lipid4p (PALMITOTRANS-RXN) EDTXS2 Endotoxin Synthesis (myristoyl transferase) [c] : kdo2lipid4L + myrsACP --> ACP + lipa (MYRISTOYLACYLTRAN-RXN) EDTXS1 Endotoxin Synthesis (lauroyl transferase) [c] : ddcaACP + kdo2lipid4 --> ACP + kdo2lipid4L (LAUROYLACYLTRAN-RXN) EDD 6-phosphogluconate dehydratase [c] : 6pgc --> 2ddg6p + h2o (PGLUCONDEHYDRAT-RXN) EDA 2-dehydro-3-deoxy-phosphogluconate aldolase [c] : 2ddg6p --> g3p + pyr (KDPGALDOL-RXN) ECOAH8 3-hydroxyacyl-CoA dehydratase (3-hydroxyoctadecanoyl-CoA) [c] : 3hodcoa <==> h2o + od2coa (ENOYL-COA-HYDRAT-RXN) ECOAH7 3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA) [c] : 3hhdcoa <==> h2o + hdd2coa (ENOYL-COA-HYDRAT-RXN) ECOAH6 3-hydroxyacyl-CoA dehydratase (3-hydroxytetradecanoyl-CoA) [c] : 3htdcoa <==> h2o + td2coa (ENOYL-COA-HYDRAT-RXN) ECOAH5 3-hydroxyacyl-CoA dehydratase (3-hydroxydodecanoyl-CoA) [c] : 3hddcoa <==> dd2coa + h2o (ENOYL-COA-HYDRAT-RXN) (:METACYC :EXPANDED-RXN-MATCH) ECOAH4 3-hydroxyacyl-CoA dehydratase (3-hydroxydecanoyl-CoA) [c] : 3hdcoa <==> dc2coa + h2o (ENOYL-COA-HYDRAT-RXN) (:EXPANDED-RXN-MATCH) ECOAH3 3-hydroxyacyl-CoA dehydratase (3-hydroxyoctanoyl-CoA) [c] : 3hocoa <==> h2o + oc2coa (ENOYL-COA-HYDRAT-RXN) ECOAH2 3-hydroxyacyl-CoA dehydratase (3-hydroxyhexanoyl-CoA) [c] : 3hhcoa <==> h2o + hx2coa ECOAH1 3-hydroxyacyl-CoA dehydratase (3-hydroxybutanoyl-CoA) [c] : 3hbcoa <==> b2coa + h2o ECAtpp enterobacterial common antigen transferase (flippase, cytoplasm to periplasm) unagamuf[c] --> unagamuf[p] (:EXCHANGE) ECAP3pp enterobacterial common antigen polymerase (periplasm) [p] : eca3und + unagamuf --> eca4und + h + udcpdp (:UNMAPPED-CPDS) ECAP2pp enterobacterial common antigen polymerase (periplasm) [p] : eca2und + unagamuf --> eca3und + h + udcpdp (:UNMAPPED-CPDS) ECAP1pp enterobacterial common antigen polymerase (periplasm) [p] : (2) unagamuf --> eca2und + h + udcpdp (:UNMAPPED-CPDS) ECA4OALpp enterobacterial common antigen (x4) O-antigen ligase (periplasm) [p] : colipa + eca4und --> eca4colipa + h + udcpdp (:UNMAPPED-CPDS) ECA4COLIPAtex enterobacterial common antigen (x4) core oligosaccharide lipid A transport (periplasm to extracellular) eca4colipa[p] --> eca4colipa[e] (:UNMAPPED-CPDS) EAR80y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C8:0) [c] : h + nadph + toct2eACP --> nadp + ocACP (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR80x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C8:0) [c] : h + nadh + toct2eACP --> nad + ocACP (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR60y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C6:0) [c] : h + nadph + thex2eACP --> hexACP + nadp (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR60x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C6:0) [c] : h + nadh + thex2eACP --> hexACP + nad (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR40y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C4:0) [c] : but2eACP + h + nadph --> butACP + nadp (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR40x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C4:0) [c] : but2eACP + h + nadh --> butACP + nad (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR181y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:1) [c] : h + nadph + t3c11vaceACP --> nadp + octeACP (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR181x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:1) [c] : h + nadh + t3c11vaceACP --> nad + octeACP (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR180y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:0) [c] : h + nadph + toctd2eACP --> nadp + ocdcaACP (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR180x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:0) [c] : h + nadh + toctd2eACP --> nad + ocdcaACP (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR161y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:1) [c] : h + nadph + t3c9palmeACP --> hdeACP + nadp (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR161x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:1) [c] : h + nadh + t3c9palmeACP --> hdeACP + nad (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR160y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:0) [c] : h + nadph + tpalm2eACP --> nadp + palmACP (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR160x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:0) [c] : h + nadh + tpalm2eACP --> nad + palmACP (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR141y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:1) [c] : h + nadph + t3c7mrseACP --> nadp + tdeACP (ENOYL-ACP-REDUCT-NADPH-RXN) ((LEFT REMOVE PROTON)) EAR141x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:1) [c] : h + nadh + t3c7mrseACP --> nad + tdeACP (ENOYL-ACP-REDUCT-NADH-RXN) ((LEFT REMOVE PROTON)) EAR140y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:0) [c] : h + nadph + tmrs2eACP --> myrsACP + nadp (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR140x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:0) [c] : h + nadh + tmrs2eACP --> myrsACP + nad (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR121y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:1) [c] : h + nadph + t3c5ddeceACP --> cddec5eACP + nadp (RXN0-2145) ((LEFT REMOVE PROTON)) EAR121x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:1) [c] : h + nadh + t3c5ddeceACP --> cddec5eACP + nad EAR120y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:0) [c] : h + nadph + tddec2eACP --> ddcaACP + nadp (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR120x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:0) [c] : h + nadh + tddec2eACP --> ddcaACP + nad (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR100y enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C10:0) [c] : h + nadph + tdec2eACP --> dcaACP + nadp (ENOYL-ACP-REDUCT-NADPH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) EAR100x enoyl-[acyl-carrier-protein] reductase (NADH) (n-C10:0) [c] : h + nadh + tdec2eACP --> dcaACP + nad (ENOYL-ACP-REDUCT-NADH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) E4PD Erythrose 4-phosphate dehydrogenase [c] : e4p + h2o + nad <==> 4per + (2) h + nadh (ERYTH4PDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) DXYLK 1-Deoxy-D-xylulose kinase [c] : atp + dxyl --> adp + dxyl5p + h (RXN0-382) ((RIGHT REMOVE PROTON)) DXPS 1-deoxy-D-xylulose 5-phosphate synthase [c] : g3p + h + pyr --> co2 + dxyl5p (DXS-RXN) ((LEFT REMOVE PROTON)) DXPRIi 1-deoxy-D-xylulose reductoisomerase [c] : dxyl5p + h + nadph --> 2me4p + nadp (DXPREDISOM-RXN) ((LEFT REMOVE PROTON)) DUTPDP dUTP diphosphatase [c] : dutp + h2o --> dump + h + ppi (DUTP-PYROP-RXN) ((RIGHT REMOVE PROTON)) DURItex deoxyuridine transport via diffusion (extracellular to periplasm) duri[e] <==> duri[p] (:EXCHANGE) DURIt2pp deoxyuridine transport in via proton symport (periplasm) duri[p] + h[p] --> duri[c] + h[c] (TRANS-RXN-108F) DURIPP deoxyuridine phosphorylase [c] : duri + pi <==> 2dr1p + ura (URA-PHOSPH-RXN) DURIK1 deoxyuridine kinase (ATP:Deoxyuridine) [c] : atp + duri --> adp + dump + h (DURIDKI-RXN) ((RIGHT REMOVE PROTON)) DUMPtex dUMP transport via diffusion (extracellular to periplasm) dump[e] <==> dump[p] (:EXCHANGE) DTMPtex dTMP transport via diffusion (extracellular to periplasm) dtmp[e] <==> dtmp[p] (:EXCHANGE) DTMPK dTMP kinase [c] : atp + dtmp <==> adp + dtdp (DTMPKI-RXN) DSERtex D-serine transport via diffusion (extracellular to periplasm) ser-D[e] <==> ser-D[p] (:EXCHANGE) DSERt2rpp D-serine transport via proton symport (periplasm) h[p] + ser-D[p] <==> h[c] + ser-D[c] (RXN0-5130) DSERDHr D-serine dehydrogenase [c] : nadp + ser-D <==> 2amsa + h + nadph DSBGGT DsbG:glutathione thiotransferase [p] : dsbgox + (2) gthrd --> dsbgrd + gthox (:UNMAPPED-CPDS) DSBDR DsbD reductase [c] : dsbdox + trdrd --> dsbdrd + trdox (:UNMAPPED-CPDS) DSBCGT DsbC:glutathione thiotransferase [p] : dsbcox + (2) gthrd --> dsbcrd + gthox (:UNMAPPED-CPDS) DSBAO2 DsbA protein reoxidation reaction (anaerobic) dsbard[p] + mqn8[c] --> dsbaox[p] + mql8[c] (:UNMAPPED-CPDS) DSBAO1 DsbA protein reoxidation reaction (aerobic) dsbard[p] + q8[c] --> dsbaox[p] + q8h2[c] (:UNMAPPED-CPDS) DRPA deoxyribose-phosphate aldolase [c] : 2dr5p --> acald + g3p (DEOXYRIBOSE-P-ALD-RXN) DPR 2-dehydropantoate 2-reductase [c] : 2dhp + h + nadph --> nadp + pant-R (2-DEHYDROPANTOATE-REDUCT-RXN) ((LEFT REMOVE PROTON)) DPCOAK dephospho-CoA kinase [c] : atp + dpcoa --> adp + coa + h (DEPHOSPHOCOAKIN-RXN) ((RIGHT REMOVE PROTON)) DOPAtex dopamine transport via diffusion (extracellular to periplasm) dopa[e] <==> dopa[p] (:EXCHANGE) DOGULNR 2,3 dioxo-L-gulonate reductase [c] : 23doguln + h + nadh --> 3dhguln + nad (RXN0-703) ((LEFT REMOVE PROTON)) DNTPPA Dihydroneopterin triphosphate pyrophosphatase [c] : ahdt + h2o --> dhpmp + h + ppi (H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN) ((RIGHT REMOVE PROTON)) DNMPPA Dihydroneopterin monophosphate dephosphorylase [c] : dhpmp + h2o --> dhnpt + pi (DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN) DM_OXAM Sink needed to allow oxamate to leave system [c] : oxam --> DM_5DRIB DM_5drib(c) [c] : 5drib --> (:UNMAPPED-CPDS) DM_4HBA Sink needed to allow 4-hydroxy-benzoate to leave system [c] : 4hba --> DMStex Dimethyl sulfide transport via diffusion (extracellular to periplasm) dms[e] <==> dms[p] (:EXCHANGE) DMSOtex Dimethyl sulfoxide transport via diffusion (extracellular to periplasm) dmso[e] <==> dmso[p] (:EXCHANGE) DMSOR2pp Dimethyl sulfoxide reductase (Demethylmenaquinol 8) (periplasm) 2dmmql8[c] + dmso[p] --> 2dmmq8[c] + dms[p] + h2o[p] DMSOR2 Dimethyl sulfoxide reductase (Demethylmenaquinol 8) [c] : 2dmmql8 + dmso --> 2dmmq8 + dms + h2o DMSOR1pp Dimethyl sulfoxide reductase (Menaquinol 8) (periplasm) dmso[p] + mql8[c] --> dms[p] + h2o[p] + mqn8[c] DMSOR1 Dimethyl sulfoxide reductase (Menaquinol 8) [c] : dmso + mql8 --> dms + h2o + mqn8 DMQMT 3-Dimethylubiquinonol 3-methyltransferase [c] : 2omhmbl + amet --> ahcys + h + q8h2 DMPPS 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp) [c] : h + h2mb4p + nadh --> dmpp + h2o + nad (RXN0-884) (:EXPANDED-RXN-MATCH) DMATT dimethylallyltranstransferase [c] : dmpp + ipdp --> grdp + ppi (GPPSYN-RXN) DKMPPD3 2,3-diketo-5-methylthio-1-phosphopentane degradation reaction [c] : dkmpp + (3) h2o + (2) nad --> 2kmb + for + (4) h + (2) nadh + pi DKMPPD 2,3-diketo-5-methylthio-1-phosphopentane degradation reaction [c] : dkmpp + h2o + o2 --> 2kmb + for + (2) h + pi DKGLCNR2y 2,5-diketo-D-gluconate reductase (NADPH) [c] : 25dkglcn + h + nadph --> 5dglcn + nadp (YIAE1-RXN) ((LEFT REMOVE PROTON)) DKGLCNR2x 2,5-diketo-D-gluconate reductase (NADH) [c] : 25dkglcn + h + nadh --> 5dglcn + nad DKGLCNR1 2,5-diketo-D-gluconate reductase [c] : 25dkglcn + h + nadph --> 2dhguln + nadp (1.1.1.274-RXN) ((LEFT REMOVE PROTON)) DINStex deoxyinosine transport via diffusion (extracellular to periplasm) din[e] <==> din[p] (:EXCHANGE) DINSt2pp deoxyinosine transport in via proton symport (periplasm) din[p] + h[p] --> din[c] + h[c] (TRANS-RXN-108E) DIMPtex dIMP transport via diffusion (extracellular to periplasm) dimp[e] <==> dimp[p] (:EXCHANGE) DHQS 3-dehydroquinate synthase [c] : 2dda7p --> 3dhq + pi (3-DEHYDROQUINATE-SYNTHASE-RXN) DHQD 3-dehydroquinate dehydratase [c] : 3dhq <==> 3dhsk + h2o (3-DEHYDROQUINATE-DEHYDRATASE-RXN) DHPTPE dihydroneopterin triphosphate 2'-epimerase [c] : ahdt <==> dhmptp (H2NTPEPIM-RXN) DHPTDCs 4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous) [c] : dhptd --> h2o + hmfurn (:UNMAPPED-CPDS) DHPS2 dihydropteroate synthase [c] : 4abz + 6hmhptpp --> dhpt + ppi (H2PTEROATESYNTH-RXN) DHPPDA2 diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp) [c] : 25drapp + h + h2o --> 5apru + nh4 (RIBOFLAVINSYNDEAM-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DHPPD 2,3-dihydroxyphenylpropionate dehydrogenase [c] : cechddd + nad --> dhpppn + h + nadh (PHENPRODIOLDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) DHORTS dihydroorotase [c] : dhor-S + h2o <==> cbasp + h (DIHYDROOROT-RXN) ((RIGHT REMOVE PROTON)) DHORD5 dihydroorotic acid (menaquinone-8) [c] : dhor-S + mqn8 --> mql8 + orot DHORD2 dihydoorotic acid dehydrogenase (quinone8) [c] : dhor-S + q8 --> orot + q8h2 DHNPA2 dihydroneopterin aldolase [c] : dhnpt --> 6hmhpt + gcald (H2NEOPTERINALDOL-RXN) DHNAOT4 1,4-dihydroxy-2-naphthoate octaprenyltransferase [c] : dhna + h + octdp --> 2dmmql8 + co2 + ppi (DMK-RXN) ((LEFT REMOVE PROTON)) DHFS dihydrofolate synthase [c] : atp + dhpt + glu-L --> adp + dhf + h + pi (DIHYDROFOLATESYNTH-RXN) ((RIGHT REMOVE PROTON)) DHFR dihydrofolate reductase [c] : dhf + h + nadph <==> nadp + thf (DIHYDROFOLATEREDUCT-RXN) ((LEFT REMOVE PROTON)) DHDPS dihydrodipicolinate synthase [c] : aspsa + pyr --> 23dhdp + h + (2) h2o (DIHYDRODIPICSYN-RXN) ((RIGHT REMOVE PROTON)) DHDPRy dihydrodipicolinate reductase (NADPH) [c] : 23dhdp + h + nadph --> nadp + thdp (DIHYDROPICRED-RXN) (:EXPANDED-RXN-MATCH) DHCINDO 2,3-dihydroxycinnamate 1,2-dioxygenase [c] : dhcinnm + o2 --> h + hkntd (:UNMAPPED-CPDS) DHCIND 2,3-dihydroxycinnamate dehydrogenase [c] : cenchddd + nad --> dhcinnm + h + nadh (:UNMAPPED-CPDS) DHBSH 2,3-dihydroxybenzoylserine hydrolase [c] : 23dhbzs + h2o --> 23dhb + ser-L DHBS 2,3-dihydroxybenzoate adenylate synthase [c] : 23dhb + atp + h --> 23dhba + ppi (DHBAMPLIG-RXN) ((LEFT REMOVE PROTON)) DHBD 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [c] : 23ddhb + nad <==> 23dhb + h + nadh (DHBDEHYD-RXN) ((RIGHT REMOVE PROTON)) DHAtpp Dihydroxyacetone transport via facilitated diffusion (periplasm) dha[p] <==> dha[c] (:EXCHANGE) DHAtex Dihydroxyacetone transport via diffusion (extracellular to periplasm) dha[e] <==> dha[p] (:EXCHANGE) DHAPT Dihydroxyacetone phosphotransferase [c] : dha + pep --> dhap + pyr (2.7.1.121-RXN) DHAD2 Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate) [c] : 23dhmp --> 3mop + h2o (DIHYDROXYMETVALDEHYDRAT-RXN) DHAD1 dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate) [c] : 23dhmb --> 3mob + h2o (DIHYDROXYISOVALDEHYDRAT-RXN) DGSNtex deoxyguanosine transport via diffusion (extracellular to periplasm) dgsn[e] <==> dgsn[p] (:EXCHANGE) DGSNt2pp deoxyguanosine transport in via proton symport (periplasm) dgsn[p] + h[p] --> dgsn[c] + h[c] (TRANS-RXN-108) (:EXPANDED-RXN-MATCH) DGMPtex dGMP transport via diffusion (extracellular to periplasm) dgmp[e] <==> dgmp[p] (:EXCHANGE) DGK1 deoxyguanylate kinase (dGMP:ATP) [c] : atp + dgmp <==> adp + dgdp (GMKALT-RXN) DDPGALA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [c] : 2dh3dgal6p <==> g3p + pyr (DEHYDDEOXPHOSGALACT-ALDOL-RXN) DDPA 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase [c] : e4p + h2o + pep --> 2dda7p + pi (DAHPSYN-RXN) DDGLK 2-dehydro-3-deoxygluconokinase [c] : 2ddglcn + atp --> 2ddg6p + adp + h (DEOXYGLUCONOKIN-RXN) ((RIGHT REMOVE PROTON)) DDGLCNtex 2-dehydro-3-deoxy-D-gluconate transport via diffusion (extracellular to periplasm) 2ddglcn[e] <==> 2ddglcn[p] (:EXCHANGE) DDGLCNt2rpp 2-dehydro-3-deoxy-D-gluconate transport via proton symport, reversible (periplasm) 2ddglcn[p] + h[p] <==> 2ddglcn[c] + h[c] (TRANS-RXN-113) DDGALK 2-dehydro-3-deoxygalactonokinase [c] : 2dh3dgal + atp --> 2dh3dgal6p + adp + h (DEHYDDEOXGALACTKIN-RXN) ((RIGHT REMOVE PROTON)) DDCAtexi Fatty acid (dodecanoate) transport via facilitated irreversible diffusion (extracellular to periplasm) ddca[e] --> ddca[p] (:EXCHANGE) DCYTtex deoxycytidine transport via diffusion (extracellular to periplasm) dcyt[e] <==> dcyt[p] (:EXCHANGE) DCYTt2pp deoxycytidine transport in via proton symport (periplasm) dcyt[p] + h[p] --> dcyt[c] + h[c] (TRANS-RXN-108D) DCYTD deoxycytidine deaminase [c] : dcyt + h + h2o --> duri + nh4 (CYTIDEAM-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DCTPD dCTP deaminase [c] : dctp + h + h2o --> dutp + nh4 (DCTP-DEAM-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DCMPtex dCMP transport via diffusion (extracellular to periplasm) dcmp[e] <==> dcmp[p] (:EXCHANGE) DCAtex Decanoate transport via diffusion (extracellular to periplasm) dca[e] <==> dca[p] (:EXCHANGE) DBTS dethiobiotin synthase [c] : atp + co2 + dann --> adp + dtbt + (3) h + pi (DETHIOBIOTIN-SYN-RXN) ((RIGHT REMOVE PROTON)) DB4PS 3,4-Dihydroxy-2-butanone-4-phosphate synthase [c] : ru5p-D --> db4p + for + h (DIOHBUTANONEPSYN-RXN) ((RIGHT REMOVE PROTON)) DATPHs dATP spontanous amine hydrolysis [c] : datp + h + h2o --> ditp + nh4 DASYN181 CDP-diacylglycerol synthetase (n-C18:1) [c] : ctp + h + pa181 --> cdpdodec11eg + ppi (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN180 CDP-diacylglycerol synthetase (n-C18:0) [c] : ctp + h + pa180 --> cdpdodecg + ppi (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN161 CDP-diacylglycerol synthetase (n-C16:1) [c] : ctp + h + pa161 --> cdpdhdec9eg + ppi (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN160 CDP-diacylglycerol synthetase (n-C16:0) [c] : ctp + h + pa160 --> cdpdhdecg + ppi (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN141 CDP-diacylglycerol synthetase (n-C14:1) [c] : ctp + h + pa141 --> cdpdtdec7eg + ppi (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN140 CDP-diacylglycerol synthetase (n-C14:0) [c] : ctp + h + pa140 --> cdpdtdecg + ppi (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DASYN120 CDP-diacylglycerol synthetase (n-C12:0) [c] : ctp + h + pa120 --> cdpdddecg + ppi (CDPDIGLYSYN-RXN) ((LEFT REMOVE PROTON)) DAPtex 1,5-Diaminopentane transport via diffusion (extracellular to periplasm) 15dap[e] <==> 15dap[p] (:EXCHANGE) DAPabcpp M-diaminopimelic acid ABC transport (periplasm) 26dap-M[p] + atp[c] + h2o[c] --> 26dap-M[c] + adp[c] + h[c] + pi[c] DAPE diaminopimelate epimerase [c] : 26dap-LL <==> 26dap-M (DIAMINOPIMEPIM-RXN) DAPDC diaminopimelate decarboxylase [c] : 26dap-M + h --> co2 + lys-L (DIAMINOPIMDECARB-RXN) ((LEFT REMOVE PROTON)) DAPAL 2,3-diaminopropionate amonnia lyase [c] : 23dappa + h2o --> (2) nh4 + pyr (4.3.1.15-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DAMPtex dAMP transport via diffusion (extracellular to periplasm) damp[e] <==> damp[p] (:EXCHANGE) DALAtex D-Alanine transport via diffusion (extracellular to periplasm) ala-D[e] <==> ala-D[p] (:EXCHANGE) DALAt2rpp D-alanine transport via proton symport (periplasm) ala-D[p] + h[p] <==> ala-D[c] + h[c] (TRANS-RXN-62A) DAGK181 diacylglycerol kinase (n-C18:1) [c] : 12dgr181 + atp --> adp + h + pa181 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK180 diacylglycerol kinase (n-C18:0) [c] : 12dgr180 + atp --> adp + h + pa180 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK161 diacylglycerol kinase (n-C16:1) [c] : 12dgr161 + atp --> adp + h + pa161 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK160 diacylglycerol kinase (n-C16:0) [c] : 12dgr160 + atp --> adp + h + pa160 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK141 diacylglycerol kinase (n-C14:1) [c] : 12dgr141 + atp --> adp + h + pa141 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK140 diacylglycerol kinase (n-C14:0) [c] : 12dgr140 + atp --> adp + h + pa140 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DAGK120 diacylglycerol kinase (n-C12:0) [c] : 12dgr120 + atp --> adp + h + pa120 (DIACYLGLYKIN-RXN) ((RIGHT REMOVE PROTON)) DADNtex deoxyadenosine transport via diffusion (extracellular to periplasm) dad-2[e] <==> dad-2[p] (:EXCHANGE) DADNt2pp deoxyadenosine transport in via proton symport (periplasm) dad-2[p] + h[p] --> dad-2[c] + h[c] (TRANS-RXN-108C) DADK deoxyadenylate kinase [c] : atp + damp <==> adp + dadp (|(DEOXY)ADENYLATE-KINASE-RXN|) (:METACYC) DADA Deoxyadenosine deaminase [c] : dad-2 + h + h2o --> din + nh4 (ADDALT-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) DAAD D-Amino acid dehydrogenase [c] : ala-D + fad + h2o --> fadh2 + nh4 + pyr D-LACtex D-lactate transport via diffusion (extracellular to periplasm) lac-D[e] <==> lac-D[p] (:EXCHANGE) D-LACt2pp D-lactate transport via proton symport (periplasm) h[p] + lac-D[p] <==> h[c] + lac-D[c] CYTK2 cytidylate kinase (dCMP) [c] : atp + dcmp <==> adp + dcdp (RXN-7913) (:METACYC) CYTK1 cytidylate kinase (CMP) [c] : atp + cmp <==> adp + cdp (CMPKI-RXN) CYTDtex cytidine transport via diffusion (extracellular to periplasm) cytd[e] <==> cytd[p] (:EXCHANGE) CYTDt2rpp cytidine transport in via proton symport, reversible (periplasm) cytd[p] + h[p] <==> cytd[c] + h[c] (TRANS-RXN-108B) CYTDt2pp cytidine transport in via proton symport (periplasm) cytd[p] + h[p] --> cytd[c] + h[c] (TRANS-RXN-108B) CYTDK2 cytidine kinase (GTP) [c] : cytd + gtp --> cmp + gdp + h (CYTIDINEKIN-RXN) ((RIGHT REMOVE PROTON)) CYTDH Cytidine hydrolase [c] : cytd + h2o --> csn + rib-D (RXN0-361) CYTD cytidine deaminase [c] : cytd + h + h2o --> nh4 + uri (CYTIDEAM2-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CYTBO3_4pp cytochrome oxidase bo3 (ubiquinol-8: 4 protons) (periplasm) (4) h[c] + (0.5) o2[c] + q8h2[c] --> (4) h[p] + h2o[c] + q8[c] (CYT-UBIQUINOL-OXID-RXN) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) CYTBDpp cytochrome oxidase bd (ubiquinol-8: 2 protons) (periplasm) (2) h[c] + (0.5) o2[c] + q8h2[c] --> (2) h[p] + h2o[c] + q8[c] (CYT-UBIQUINOL-OXID-RXN) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) CYTBD2pp cytochrome oxidase bd (menaquinol-8: 2 protons) (periplasm) (2) h[c] + mql8[c] + (0.5) o2[c] --> (2) h[p] + h2o[c] + mqn8[c] CYStpp L-cysteine export via facilitated transport cys-L[c] --> cys-L[p] (RXN0-1924) CYStex L-cysteine transport via diffusion (extracellular to periplasm) cys-L[e] <==> cys-L[p] (:EXCHANGE) CYSabcpp L-cysteine uptake via ABC system (periplasm) atp[c] + cys-L[p] + h2o[c] --> adp[c] + cys-L[c] + h[c] + pi[c] CYSabc2pp L-cysteine export via ABC system (cytoplasm to periplasm) atp[c] + cys-L[c] + h2o[c] --> adp[c] + cys-L[p] + h[c] + pi[c] CYSTRS Cysteinyl-tRNA synthetase [c] : atp + cys-L + trnacys --> amp + cystrna + ppi (CYSTEINE--TRNA-LIGASE-RXN) CYSTL cystathionine b-lyase [c] : cyst-L + h2o --> hcys-L + nh4 + pyr (CYSTATHIONINE-BETA-LYASE-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CYSSADS L-cysteine sulfinic acid desulfurase [c] : 3sala + (2) h --> ala-L + so2 (RXN0-279) ((LEFT REMOVE PROTON)) CYSS cysteine synthase [c] : acser + h2s --> ac + cys-L + h (ACSERLY-RXN) ((RIGHT REMOVE PROTON)) CYSDtex D-cysteine transport via diffusion (extracellular to periplasm) cys-D[e] <==> cys-D[p] (:EXCHANGE) CYSDabcpp D-cysteine uptake via ABC system (periplasm) atp[c] + cys-D[p] + h2o[c] --> adp[c] + cys-D[c] + h[c] + pi[c] CYSDS Cysteine Desulfhydrase [c] : cys-L + h2o --> h2s + nh4 + pyr (LCYSDESULF-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CYSDDS D-cysteine desulfhydrase [c] : cys-D + h2o --> h2s + nh4 + pyr (DCYSDESULF-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CYNTtex Cyanate transport via diffusion (extracellular to periplasm) cynt[e] <==> cynt[p] (:EXCHANGE) CYNTt2pp Cyanate transport via proton symport (periplasm) cynt[p] + h[p] --> cynt[c] + h[c] (TRANS-RXN-14) CYNTAH Cyanate aminohydrolase [c] : cynt + (3) h + hco3 --> (2) co2 + nh4 CYANtex Cyanide transport via diffusion (extracellular to periplasm) cyan[e] <==> cyan[p] (:EXCHANGE) CYANSTpp Cyanide sulfurtransferase (periplasmic) [p] : cyan + tsul --> h + so3 + tcynt CYANST Cyanide sulfurtransferase [c] : cyan + tsul --> h + so3 + tcynt (THIOSULFATE-SULFURTRANSFERASE-RXN) ((RIGHT REMOVE PROTON)) CUtex copper (Cu+1) transport via diffusion (extracellular to periplasm) cu[e] <==> cu[p] (:EXCHANGE) CUt3 copper transport out via proton antiport cu[c] + h[e] --> cu[e] + h[c] CU2tpp copper transport in/out via permease (no H+) cu2[p] <==> cu2[c] (:EXCHANGE) CU2tex copper (Cu+2) transport via diffusion (extracellular to periplasm) cu2[e] <==> cu2[p] (:EXCHANGE) CU2abcpp Copper (Cu+2) ABC transporter (periplasm) atp[c] + cu2[c] + h2o[c] --> adp[c] + cu2[p] + h[c] + pi[c] CU1abcpp Copper (Cu +1) ABC transporter (periplasm) atp[c] + cu[c] + h2o[c] --> adp[c] + cu[p] + h[c] + pi[c] CU1Opp Cuprous Oxidase (Cu+1) [p] : (4) cu + (4) h + o2 --> (4) cu2 + (2) h2o CTPS2 CTP synthase (glutamine) [c] : atp + gln-L + h2o + utp --> adp + ctp + glu-L + (2) h + pi CTBTt2rpp cronobetaine outward transport (H+ antiport) ctbt[p] + h[p] <==> ctbt[c] + h[c] CTBTabcpp crotonobetaine transport via ABC system (periplasm) atp[c] + ctbt[p] + h2o[c] --> adp[c] + ctbt[c] + h[c] + pi[c] CTBTCAL Crotonobetaine-CoA Ligase [c] : coa + ctbt + h --> ctbtcoa + h2o (CROTCOALIG-RXN) ((LEFT REMOVE PROTON)) CSNtex cytosine transport via diffusion (extracellular to periplasm) csn[e] <==> csn[p] (:EXCHANGE) CSNt2pp cytosine transport in via proton symport (periplasm) csn[p] + h[p] --> csn[c] + h[c] (TRANS-RXN-116) CSND Cytosine deaminase [c] : csn + h + h2o --> nh4 + ura (CYTDEAM-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) CS citrate synthase [c] : accoa + h2o + oaa --> cit + coa + h (CITSYN-RXN) ((RIGHT REMOVE PROTON)) CRNtex L-carnitine transport via diffusion (extracellular to periplasm) crn[e] <==> crn[p] (:EXCHANGE) CRNt8pp L-carnitine/D-carnitine antiporter (periplasm) crn[p] + crn-D[c] --> crn[c] + crn-D[p] CRNt7pp Carnitine/butyrobetaine antiporter (periplasm) crn[p] + gbbtn[c] --> crn[c] + gbbtn[p] (TRANS-RXN-100) CRNt2rpp L-carnitine outward transport (H+ antiport) crn[p] + h[p] <==> crn[c] + h[c] CRNabcpp L-carnitine transport via ABC system (periplasm) atp[c] + crn[p] + h2o[c] --> adp[c] + crn[c] + h[c] + pi[c] CRNDt2rpp D-carnitine outward transport (H+ antiport) crn-D[p] + h[p] <==> crn-D[c] + h[c] CRNDabcpp D-carnitine transport via ABC system (periplasm) atp[c] + crn-D[p] + h2o[c] --> adp[c] + crn-D[c] + h[c] + pi[c] CRNDCAL D-Carnitine-CoA Ligase [c] : coa + crn-D + h --> crnDcoa + h2o (DCARNCOALIG-RXN) ((LEFT REMOVE PROTON)) CRNCDH Carnityl-CoA dehydratse [c] : crncoa <==> ctbtcoa + h2o (RXN0-3561) CRNCBCT crotonobetainyl-CoA: carnitine CoA transferase [c] : crn + ctbtcoa <==> crncoa + ctbt CRNCAR carnitine-CoA racemase [c] : crncoa <==> crnDcoa (CARNCOARACE-RXN) CRNCAL Carnitine-CoA Ligase [c] : coa + crn + h --> crncoa + h2o (LCARNCOALIG-RXN) ((LEFT REMOVE PROTON)) CRNBTCT gamma-butyrobetainyl-CoA: carnitine CoA transferase [c] : bbtcoa + crn <==> crncoa + gbbtn (RXN0-3601) CPPPGO2 Oxygen Independent coproporphyrinogen-III oxidase [c] : (2) amet + cpppg3 --> (2) co2 + (2) dad-5 + (2) met-L + pppg9 (HEMN-RXN) CPPPGO coproporphyrinogen oxidase (O2 required) [c] : cpppg3 + (2) h + o2 --> (2) co2 + (2) h2o + pppg9 (RXN0-1461) CPGNtonex Coprogen transport via ton system (extracellular) cpgn[e] + h[p] --> cpgn[p] + h[c] (RXN0-1702) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) CPGNexs coprogen Fe-loading reaction (spontaneaous) [e] : cpgn-un + fe3 --> cpgn (:UNMAPPED-CPDS) CPGNabcpp coprogen transport via ABC system (periplasm) atp[c] + cpgn[p] + h2o[c] --> adp[c] + cpgn[c] + h[c] + pi[c] CPGNUtpp coprogen unloaded secretion cpgn-un[c] + h[p] --> cpgn-un[p] + h[c] (:UNMAPPED-CPDS) CPGNUtex coprogen unloaded secretion (extracellular) cpgn-un[p] + h[p] --> cpgn-un[e] + h[c] (:UNMAPPED-CPDS) CPGNR3 coprogen(Fe(III)) reductase [c] : (2) cpgn + rbflvrd --> (2) cpgn-un + (2) fe2 + (2) h + ribflv (:UNMAPPED-CPDS) CPGNR2 coprogen(Fe(III)) reductase [c] : (2) cpgn + fmnh2 --> (2) cpgn-un + (2) fe2 + fmn + (2) h (:UNMAPPED-CPDS) CPGNR1 coprogen(Fe(III)) reductase [c] : (2) cpgn + fadh2 --> (2) cpgn-un + fad + (2) fe2 + (2) h (:UNMAPPED-CPDS) COLIPAtex core oligosaccharide lipid A transport via vector (periplasm to extracellular) colipa[p] --> colipa[e] (:UNMAPPED-CPDS) COLIPAabcpp core oligosaccharide lipid A transport via ABC system (periplasm) atp[c] + colipa[c] + h2o[c] --> adp[c] + colipa[p] + h[c] + pi[c] (:UNMAPPED-CPDS) COBALT2tpp cobalt transport in/out via permease (no H+) cobalt2[p] <==> cobalt2[c] (TRANS-RXN-141A) COBALT2tex cobalt (Co+2) transport via diffusion (extracellular to periplasm) cobalt2[e] <==> cobalt2[p] (:EXCHANGE) COBALT2abcpp Cobalt (Co+2) ABC transporter (periplasm) atp[c] + cobalt2[c] + h2o[c] --> adp[c] + cobalt2[p] + h[c] + pi[c] CO2tpp CO2 transporter via diffusion (periplasm) co2[p] <==> co2[c] (:EXCHANGE) CO2tex CO2 transport via diffusion (extracellular to periplasm) co2[e] <==> co2[p] (:EXCHANGE) CMPtex CMP transport via diffusion (extracellular to periplasm) cmp[e] <==> cmp[p] (:EXCHANGE) CMPN CMP nucleosidase [c] : cmp + h2o --> csn + r5p CLtex chloride (Cl-1) transport via diffusion (extracellular to periplasm) cl[e] <==> cl[p] (:EXCHANGE) CLt3rpp chloride transport out via proton antiport (periplasm) cl[p] + h[c] <==> cl[c] + h[p] (RXN0-2501) CLPNS181pp cardiolipin synthase (periplasmic, n-C18:1) [p] : (2) pg181 <==> clpn181 + glyc CLPNS180pp cardiolipin synthase (periplasmic, n-C18:0) [p] : (2) pg180 <==> clpn180 + glyc CLPNS161pp cardiolipin synthase (periplasmic, n-C16:1) [p] : (2) pg161 <==> clpn161 + glyc CLPNS160pp cardiolipin synthase (periplasmic, n-C16:0) [p] : (2) pg160 <==> clpn160 + glyc CLPNS141pp cardiolipin synthase (periplasmic, n-C14:1) [p] : (2) pg141 <==> clpn141 + glyc CLPNS140pp cardiolipin synthase (periplasmic, n-C14:0) [p] : (2) pg140 <==> clpn140 + glyc CLPNS120pp cardiolipin synthase (periplasmic, n-C12:0) [p] : (2) pg120 <==> clpn120 + glyc CLPNH181pp cardiolipin hydrolase (periplasm, n-C18:1) [p] : clpn181 + h2o --> h + pa181 + pg181 CLPNH180pp cardiolipin hydrolase (periplasm, n-C18:0) [p] : clpn180 + h2o --> h + pa180 + pg180 CLPNH161pp cardiolipin hydrolase (periplasm, n-C16:1) [p] : clpn161 + h2o --> h + pa161 + pg161 CLPNH160pp cardiolipin hydrolase (periplasm, n-C16:0) [p] : clpn160 + h2o --> h + pa160 + pg160 CLPNH141pp cardiolipin hydrolase (periplasm, n-C14:1) [p] : clpn141 + h2o --> h + pa141 + pg141 CLPNH140pp cardiolipin hydrolase (periplasm, n-C14:0) [p] : clpn140 + h2o --> h + pa140 + pg140 CLPNH120pp cardiolipin hydrolase (periplasm, n-C12:0) [p] : clpn120 + h2o --> h + pa120 + pg120 CLIPAtex cold lipid A transport via vector (periplasm to extracellular) lipa_cold[p] --> lipa_cold[e] (:EXCHANGE) CITtex citrate transport via diffusion (extracellular to periplasm) cit[e] <==> cit[p] (:EXCHANGE) CITt7pp Citrate transport via succinate antiport (periplasm) cit[p] + succ[c] --> cit[c] + succ[p] (TRANS-RXN-201) CITL Citrate lyase [c] : cit --> ac + oaa (CITLY-RXN) CINNDO Cinnamate dioxygenase [c] : cinnm + h + nadh + o2 --> cenchddd + nad CHRPL Chorismate pyruvate lyase [c] : chor --> 4hbz + pyr (CHORPYRLY-RXN) CHORS chorismate synthase [c] : 3psme --> chor + pi (CHORISMATE-SYNTHASE-RXN) CHORM chorismate mutase [c] : chor --> pphn (CHORISMATEMUT-RXN) CHLtex choline transport via diffusion (extracellular to periplasm) chol[e] <==> chol[p] (:EXCHANGE) CHLt2rpp choline transport via proton symport, reversible (periplasm) chol[p] + h[p] <==> chol[c] + h[c] (TRANS-RXN-99) CHLabcpp choline transport via ABC system (periplasm) atp[c] + chol[p] + h2o[c] --> adp[c] + chol[c] + h[c] + pi[c] CGLYtex L-Cysteinylglycine transport via diffusion (extracellular to periplasm) cgly[e] <==> cgly[p] (:UNMAPPED-CPDS) CGLYabcpp L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm) atp[c] + cgly[p] + h2o[c] --> adp[c] + cgly[c] + h[c] + pi[c] (:UNMAPPED-CPDS) CFAS180G cyclopropane fatty acid synthase (Phosphatidylglycerol, n-C18:0) [c] : (2) amet + pg181 --> (2) ahcys + cpg180 + (2) h CFAS180E cyclopropane fatty acid synthase (Phosphatidylethanolamine, n-C18:0) [c] : (2) amet + pe181 --> (2) ahcys + cpe180 + (2) h CFAS160G cyclopropane fatty acid synthase (Phosphatidylglycerol, n-C16:0) [c] : (2) amet + pg161 --> (2) ahcys + cpg160 + (2) h CFAS160E cyclopropane fatty acid synthase (Phosphatidylethanolamine, n-C16:0) [c] : (2) amet + pe161 --> (2) ahcys + cpe160 + (2) h CDt3pp cadmium (Cd+2) transport out via proton antiport (periplasm) cd2[c] + h[p] --> cd2[p] + h[c] CDPMEK 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [c] : 4c2me + atp --> 2p4c2me + adp + h (2.7.1.148-RXN) ((RIGHT REMOVE PROTON)) CDAPPA181 CDP-Diacylglycerol pyrophostatase (n-C18:1) [c] : cdpdodec11eg + h2o --> cmp + (2) h + pa181 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA180 CDP-Diacylglycerol pyrophostatase (n-C18:0) [c] : cdpdodecg + h2o --> cmp + (2) h + pa180 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA161 CDP-Diacylglycerol pyrophostatase (n-C16:1) [c] : cdpdhdec9eg + h2o --> cmp + (2) h + pa161 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA160 CDP-Diacylglycerol pyrophostatase (n-C16:0) [c] : cdpdhdecg + h2o --> cmp + (2) h + pa160 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA141 CDP-Diacylglycerol pyrophostatase (n-C14:1) [c] : cdpdtdec7eg + h2o --> cmp + (2) h + pa141 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA140 CDP-Diacylglycerol pyrophostatase (n-C14:0) [c] : cdpdtdecg + h2o --> cmp + (2) h + pa140 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CDAPPA120 CDP-Diacylglycerol pyrophostatase (n-C12:0) [c] : cdpdddecg + h2o --> cmp + (2) h + pa120 (CDPDIGLYPYPHOSPHA-RXN) ((RIGHT REMOVE PROTON)) CD2tex cadmium (Cd+2) transport via diffusion (extracellular to periplasm) cd2[e] <==> cd2[p] (:EXCHANGE) CD2abcpp Cadmium (Cd+2) ABC transporter (periplasm) atp[c] + cd2[c] + h2o[c] --> adp[c] + cd2[p] + h[c] + pi[c] CBPS carbamoyl-phosphate synthase (glutamine-hydrolysing) [c] : (2) atp + gln-L + h2o + hco3 --> (2) adp + cbp + glu-L + (2) h + pi CBMKr Carbamate kinase [c] : atp + co2 + nh4 <==> adp + cbp + (2) h (CARBAMATE-KINASE-RXN) (:METACYC (LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT REMOVE PROTON)) CBLAT cob(I)alamin adenosyltransferase [c] : atp + cbl1 + h <==> adocbl + pppi CBL1tonex Cob(1)alamin transport via ton system (extermal) cbl1[e] + h[p] --> cbl1[p] + h[c] (RXN0-1565) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) CBL1abcpp Cob(1)alamin transport via ABC system (periplasm) atp[c] + cbl1[p] + h2o[c] --> adp[c] + cbl1[c] + h[c] + pi[c] (ABC-5-RXN) ((RIGHT REMOVE PROTON)) CBIuabcpp Cobinamide transport via ABC system (uptake, periplasm) atp[c] + cbi[p] + h2o[c] --> adp[c] + cbi[c] + h[c] + pi[c] CBItonex Cobinamide transport via ton system (extermal) cbi[e] + h[p] --> cbi[p] + h[c] CBIAT Cobinamide adenyltransferase [c] : atp + cbi + h <==> adocbi + pppi CAt3_1pp calcium proton antiporter (H:CA is 1:1) (periplasm) ca2[c] + h[p] <==> ca2[p] + h[c] (TRANS-RXN-144) CAT catalase [c] : (2) h2o2 --> (2) h2o + o2 (CATAL-RXN) CADVtpp Lysine/Cadaverine antiporter (periplasm) 15dap[c] + h[p] + lys-L[p] --> 15dap[p] + h[c] + lys-L[c] CA2tex calcium (Ca+2) transport via diffusion (extracellular to periplasm) ca2[e] <==> ca2[p] (:EXCHANGE) BUTtex Butyrate transport via diffusion (extracellular to periplasm) but[e] <==> but[p] (:EXCHANGE) BUTt2rpp Butyrate transport via proton symport, reversible (periplasm) but[p] + h[p] <==> but[c] + h[c] BUTSO3tex butanesulfonate transport via diffusion (extracellular to periplasm) butso3[e] <==> butso3[p] (:EXCHANGE) BUTSO3abcpp butanesulfonate transport via ABC system (periplasm) atp[c] + butso3[p] + h2o[c] --> adp[c] + butso3[c] + h[c] + pi[c] BUTCT Acetyl-CoA:butyrate-CoA transferase [c] : accoa + but --> ac + btcoa (R11-RXN) (:METACYC) BTS4 Biotin synthase [c] : amet + dtbt + s --> btn + dad-5 + h + met-L (2.8.1.6-RXN) ((RIGHT REMOVE PROTON)) BSORy Biotin sulfoxide reductase [c] : btnso + h + nadph --> btn + h2o + nadp BSORx Biotin sulfoxide reductase [c] : btnso + h + nadh --> btn + h2o + nad BPNT 3',5'-bisphosphate nucleotidase [c] : h2o + pap --> amp + pi (|3'(2'),5'-BISPHOSPHATE-NUCLEOTIDASE-RXN|) (:METACYC) BETALDHy betaine-aldehyde dehydrogenase [c] : betald + h2o + nadp --> glyb + (2) h + nadph BETALDHx betaine-aldehyde dehydrogenase [c] : betald + h2o + nad --> glyb + (2) h + nadh (BADH-RXN) ((RIGHT REMOVE PROTON)) BALAtex beta-alanine transport via diffusion (extracellular to periplasm) ala-B[e] <==> ala-B[p] (:EXCHANGE) BALAt2rpp beta-alanine reversible transport via proton symport (periplasm) ala-B[p] + h[p] <==> ala-B[c] + h[c] ATPS4rpp ATP synthase (four protons for one ATP) (periplasm) adp[c] + (4) h[p] + pi[c] <==> atp[c] + (3) h[c] + h2o[c] (ATPSYN-RXN) ATPPRT ATP phosphoribosyltransferase [c] : atp + prpp --> ppi + prbatp (ATPPHOSPHORIBOSYLTRANS-RXN) ATPM ATP maintenance requirement [c] : atp + h2o --> adp + h + pi (RXN0-1061 3.6.3.1-RXN 3.6.3.15-RXN 3.6.3.46-RXN 3.6.3.49-RXN 3.6.3.50-RXN 3.6.3.51-RXN 3.6.3.52-RXN 3.6.4.1-RXN 3.6.4.2-RXN 3.6.4.3-RXN 3.6.4.4-RXN 3.6.4.5-RXN 3.6.4.6-RXN 3.6.4.7-RXN 3.6.4.8-RXN 3.6.4.9-RXN 3.6.4.11-RXN ADENOSINETRIPHOSPHATASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) ATPHs ATP spontanous amine hydrolysis [c] : atp + h + h2o --> itp + nh4 (ATP-DEAMINASE-RXN) (:METACYC (LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ATHRDHr L-allo-threonine dehydrogenase [c] : athr-L + nadp <==> 2aobut + h + nadph AST Arginine succinyltransferase [c] : arg-L + succoa --> coa + h + sucarg (ARGININE-N-SUCCINYLTRANSFERASE-RXN) ((RIGHT REMOVE PROTON)) ASR arsenate reductase [c] : aso4 + (2) gthrd --> aso3 + gthox + h2o ASPtex L-aspartate transport via diffusion (extracellular to periplasm) asp-L[e] <==> asp-L[p] (:EXCHANGE) ASPt2pp L-aspartate transport in via proton symport (periplasm) asp-L[p] + h[p] --> asp-L[c] + h[c] (TRANS-RXN-122A) ASPt2_3pp L-asparate transport via proton symport (3 H) (periplasm) asp-L[p] + (3) h[p] --> asp-L[c] + (3) h[c] (TRANS-RXN-122A) ASPt2_2pp Aspartate transport via proton symport (2 H) (periplasm) asp-L[p] + (2) h[p] --> asp-L[c] + (2) h[c] (TRANS-RXN-122A) ASPabcpp L-aspartate transport via ABC system (periplasm) asp-L[p] + atp[c] + h2o[c] --> adp[c] + asp-L[c] + h[c] + pi[c] ASPTRS Aspartyl-tRNA synthetase [c] : asp-L + atp + trnaasp --> amp + asptrna + ppi (ASPARTATE--TRNA-LIGASE-RXN) ASPTA aspartate transaminase [c] : akg + asp-L <==> glu-L + oaa (ASPAMINOTRANS-RXN) ASPT L-aspartase [c] : asp-L --> fum + nh4 (ASPARTASE-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ASPO6 L-aspartate oxidase [c] : asp-L + o2 --> h + h2o2 + iasp (L-ASPARTATE-OXID-RXN) ((RIGHT REMOVE PROTON)) ASPO5 L-aspartate oxidase [c] : asp-L + fum --> h + iasp + succ ASPO4 L-aspartate oxidase [c] : asp-L + mqn8 --> h + iasp + mql8 ASPO3 L-aspartate oxidase [c] : asp-L + q8 --> h + iasp + q8h2 ASPK aspartate kinase [c] : asp-L + atp <==> 4pasp + adp (ASPARTATEKIN-RXN) ASPCT aspartate carbamoyltransferase [c] : asp-L + cbp --> cbasp + h + pi (ASPCARBTRANS-RXN) ((RIGHT REMOVE PROTON)) ASP1DC aspartate 1-decarboxylase [c] : asp-L + h --> ala-B + co2 (ASPDECARBOX-RXN) ((LEFT REMOVE PROTON)) ASO3tex arsenite transport via diffusion (extracellular to periplasm) aso3[e] <==> aso3[p] (:EXCHANGE) ASO3t8pp arsenite efflux via ATP hydrolysis (periplasm) aso3[c] + atp[c] + h2o[c] --> adp[c] + aso3[p] + h[c] + pi[c] (3.6.3.16-RXN) (:METACYC (RIGHT REMOVE PROTON)) ASNtex L-asparagine transport via diffusion (extracellular to periplasm) asn-L[e] <==> asn-L[p] (:EXCHANGE) ASNt2rpp L-asparagine reversible transport via proton symport (periplasm) asn-L[p] + h[p] <==> asn-L[c] + h[c] (TRANS-RXN-262) ASNabcpp L-asparagine transport via ABC system (periplasm) asn-L[p] + atp[c] + h2o[c] --> adp[c] + asn-L[c] + h[c] + pi[c] ASNTRS Asparaginyl-tRNA synthetase [c] : asn-L + atp + trnaasn --> amp + asntrna + ppi (ASPARAGINE--TRNA-LIGASE-RXN) ASNS2 asparagine synthetase [c] : asp-L + atp + nh4 --> amp + asn-L + h + ppi (ASNSYNA-RXN) ((LEFT SUBSTITUTE AMMONIA AMMONIUM) (RIGHT REMOVE PROTON)) ASNS1 asparagine synthase (glutamine-hydrolysing) [c] : asp-L + atp + gln-L + h2o --> amp + asn-L + glu-L + h + ppi (ASNSYNB-RXN) ((RIGHT REMOVE PROTON)) ASNNpp L-asparaginase [p] : asn-L + h2o --> asp-L + nh4 ASNN L-asparaginase [c] : asn-L + h2o --> asp-L + nh4 (ASPARAGHYD-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ASCBtex L-ascorbate transport via diffusion (extracellular to periplasm) ascb-L[e] <==> ascb-L[p] (:EXCHANGE) ASCBptspp L-ascorbate transport via PEP:Pyr PTS (periplasm) ascb-L[p] + pep[c] --> ascb6p[c] + pyr[c] (RXN0-2461) ASCBPL L-ascorbate 6-phosphate lactonase [c] : ascb6p + h2o --> 3dhgulnp + h ASAD aspartate-semialdehyde dehydrogenase [c] : aspsa + nadp + pi <==> 4pasp + h + nadph (ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN) ((RIGHT REMOVE PROTON)) ARGtex L-arginine transport via diffusion (extracellular to periplasm) arg-L[e] <==> arg-L[p] (:EXCHANGE) ARGt3pp L-arginine transport out via proton antiport (cytoplasm to periplasm) arg-L[c] + h[p] --> arg-L[p] + h[c] ARGabcpp L-arginine transport via ABC system (periplasm) arg-L[p] + atp[c] + h2o[c] --> adp[c] + arg-L[c] + h[c] + pi[c] (ABC-4-RXN) ((RIGHT REMOVE PROTON)) ARGTRS Arginyl-tRNA synthetase [c] : arg-L + atp + trnaarg --> amp + argtrna + ppi (ARGININE--TRNA-LIGASE-RXN) ARGSS argininosuccinate synthase [c] : asp-L + atp + citr-L --> amp + argsuc + h + ppi (ARGSUCCINSYN-RXN) ((RIGHT REMOVE PROTON)) ARGSL argininosuccinate lyase [c] : argsuc <==> arg-L + fum (ARGSUCCINLYA-RXN) ARGORNt7pp arginine/ornithine antiporter (periplasm) arg-L[p] + orn[c] <==> arg-L[c] + orn[p] ARGDCpp arginine decarboxylase [p] : arg-L + h --> agm + co2 ARGDC arginine decarboxylase [c] : arg-L + h --> agm + co2 (ARGDECARBOX-RXN) ((LEFT REMOVE PROTON)) ARGAGMt7pp Arginine/agmatine antiport (periplasm) agm[c] + arg-L[p] <==> agm[p] + arg-L[c] (RXN0-2162) ARBtex L-arabinose transport via diffusion (extracellular to periplasm) arab-L[e] <==> arab-L[p] (RXN0-1683) ARBt3ipp L-arabinose transport via proton antiport (periplasm) arab-L[c] + h[p] --> arab-L[p] + h[c] (TRANS-RXN-40) ARBt2rpp L-arabinose transport via proton symport (periplasm) arab-L[p] + h[p] <==> arab-L[c] + h[c] (TRANS-RXN-10) ARBabcpp L-arabinose transport via ABC system (periplasm) arab-L[p] + atp[c] + h2o[c] --> adp[c] + arab-L[c] + h[c] + pi[c] (ABC-2-RXN) ((RIGHT REMOVE PROTON)) ARBTNtpp aerobactin secretion (to periplasm) arbtn[c] + h[p] --> arbtn[p] + h[c] ARBTNtonex aerobactin transport via ton system (extracellular) arbtn-fe3[e] + h[p] --> arbtn-fe3[p] + h[c] (:UNMAPPED-CPDS) ARBTNtex aerobactin secretion (to extracellular) arbtn[p] + h[p] --> arbtn[e] + h[c] ARBTNexs aerobactin Fe-loading reaction (spontaneous) [e] : arbtn + fe3 --> arbtn-fe3 (:UNMAPPED-CPDS) ARBTNabcpp aerobactin transport via ABC system (periplasm) arbtn-fe3[p] + atp[c] + h2o[c] --> adp[c] + arbtn-fe3[c] + h[c] + pi[c] (:UNMAPPED-CPDS) ARBTNR3 aerobactin reductase [c] : (2) arbtn-fe3 + rbflvrd --> (2) arbtn + (2) fe2 + (2) h + ribflv (:UNMAPPED-CPDS) ARBTNR2 aerobactin reductase [c] : (2) arbtn-fe3 + fmnh2 --> (2) arbtn + (2) fe2 + fmn + (2) h (:UNMAPPED-CPDS) ARBTNR1 aerobactin reductase [c] : (2) arbtn-fe3 + fadh2 --> (2) arbtn + fad + (2) fe2 + (2) h (:UNMAPPED-CPDS) ARAI L-arabinose isomerase [c] : arab-L <==> rbl-L (ARABISOM-RXN) APRAUR 5-amino-6-(5-phosphoribosylamino)uracil reductase [c] : 5apru + h + nadph --> 5aprbu + nadp (RIBOFLAVINSYNREDUC-RXN) AP5AH Ap5A hydrolase [c] : ap5a + h2o --> adp + atp + (2) h (:UNMAPPED-CPDS) AP4AH Ap4A hydrolase [c] : ap4a + h2o --> (2) adp + (2) h (3.6.1.41-RXN) ((RIGHT REMOVE PROTON)) AOXSr 8-amino-7-oxononanoate synthase [c] : ala-L + h + pmcoa <==> 8aonn + co2 + coa (7KAPSYN-RXN) ((LEFT REMOVE PROTON)) AOBUTDs L-2-amino-3-oxobutanoate decarboxylation [c] : 2aobut + h --> aact + co2 (THREOSPON-RXN) ((LEFT REMOVE PROTON)) ANS anthranilate synthase [c] : chor + gln-L --> anth + glu-L + h + pyr (ANTHRANSYN-RXN) ((RIGHT REMOVE PROTON)) ANPRT anthranilate phosphoribosyltransferase [c] : anth + prpp --> ppi + pran (PRTRANS-RXN) ANHMK 1,6-anhydrous-N-Acetylmuramate kinase [c] : anhm + atp + h2o --> acmum6p + adp + h ANHGMtex GlcNAc-anhMurNAc transport via diffusion (extracellular to periplasm) anhgm[e] <==> anhgm[p] (:UNMAPPED-CPDS) AMPtex AMP transport via diffusion (extracellular to periplasm) amp[e] <==> amp[p] (:EXCHANGE) AMPTASEPG aminopeptidase (pro-gly) [c] : h2o + progly --> gly + pro-L (:UNMAPPED-CPDS) AMPTASECG alanyl aminopeptidase (cys-gly) [c] : cgly + h2o --> cys-L + gly (:UNMAPPED-CPDS) AMPN AMP nucleosidase [c] : amp + h2o --> ade + r5p (AMP-NUCLEOSID-RXN) AMPMS2 4-amino-2-methyl-5-phosphomethylpyrimidine synthetase [c] : air + h2o + nad --> 4ampm + (2) for + (3) h + nadh AMMQLT8 S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8) [c] : 2dmmql8 + amet --> ahcys + h + mql8 AMAOTr adenosylmethionine-8-amino-7-oxononanoate transaminase [c] : 8aonn + amet <==> amob + dann (DAPASYN-RXN) AMANK N-acetyl-D-mannosamine kinase [c] : acmana + atp --> acmanap + adp + h (NANK-RXN) ((RIGHT REMOVE PROTON)) AMANAPEr N-acetylmannosamine 6-phosphate epimerase [c] : acmanap <==> acgam6p (NANE-RXN) AMALT4 Amylomaltase (maltohexaose) [c] : malt + malthx --> glc-D + malthp AMALT3 Amylomaltase (maltopentaose) [c] : malt + maltpt --> glc-D + malthx AMALT2 Amylomaltase (maltotetraose) [c] : malt + maltttr --> glc-D + maltpt AMALT1 Amylomaltase (maltotriose) [c] : malt + malttr --> glc-D + maltttr (AMYLOMALT-RXN) AM4PCP anhydrous-N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase [c] : anhm4p + h2o --> ala-D + anhm3p (:UNMAPPED-CPDS) AM4PA anhydrous-N-Acetylmuramyl-tetrapeptide amidase [c] : anhm4p + h2o --> LalaDgluMdapDala + anhm (:UNMAPPED-CPDS) AM3PA anhydrous-N-Acetylmuramyl-tripeptide amidase [c] : anhm3p + h2o --> LalaDgluMdap + anhm (:UNMAPPED-CPDS) ALTRH altronate hydrolase [c] : altrn --> 2ddglcn + h2o (ALTRODEHYDRAT-RXN) ALR4x aldose reductase (acetol) [c] : acetol + h + nadh --> 12ppd-R + nad (:UNMAPPED-CPDS) ALR2 aldose reductase (methylglyoxal) [c] : h + mthgxl + nadph --> acetol + nadp (RXN0-4281) ((LEFT REMOVE PROTON)) ALPATG160pp apolipoprotein N-acyltransferase (phosphatidylglycerol, periplasm) [p] : alpp + pg160 --> 2agpg160 + lpp (:UNMAPPED-CPDS) ALPATE160pp apolipoprotein N-acyltransferase (phosphatidylethanolamine, periplasm) [p] : alpp + pe160 --> 2agpe160 + lpp (:UNMAPPED-CPDS) ALLtex Allose transport via diffusion (extracellular to periplasm) all-D[e] <==> all-D[p] (RXN0-1683) (:EXPANDED-RXN-MATCH) ALLabcpp D-allose transport via ABC system (periplasm) all-D[p] + atp[c] + h2o[c] --> adp[c] + all-D[c] + h[c] + pi[c] (ABC-42-RXN) ((RIGHT REMOVE PROTON)) ALLULPE Allulose 6-phosphate epimerase [c] : allul6p <==> f6p (RXN0-304) ALLTNtex allantoin transport via diffusion (extracellular to periplasm) alltn[e] <==> alltn[p] (:EXCHANGE) ALLTNt2rpp allantoin transport in via proton symport (periplasm) alltn[p] + h[p] <==> alltn[c] + h[c] ALLTN allantoinase [c] : alltn + h2o --> alltt + h (ALLANTOINASE-RXN) ((RIGHT REMOVE PROTON)) ALLTAMH allantoate amidohydrolase [c] : alltt + (2) h + (2) h2o --> co2 + (2) nh4 + urdglyc ALLPI Allose 6-phosphate isomerase [c] : all6p <==> allul6p (RXN0-303) ALLK Allose kinase [c] : all-D + atp --> adp + all6p + h (ALLOSE-KINASE-RXN) ((RIGHT REMOVE PROTON)) ALDD4 aldehyde dehydrogenase (butanal, NAD) [c] : btal + h2o + nad --> but + (2) h + nadh ALDD3y aldehyde dehydrogenase (propanal, NADP) [c] : h2o + nadp + ppal --> (2) h + nadph + ppa ALDD2y aldehyde dehydrogenase (acetaldehyde, NADP) [c] : acald + h2o + nadp --> ac + (2) h + nadph (RXN0-3962) ALDD2x aldehyde dehydrogenase (acetaldehyde, NAD) [c] : acald + h2o + nad --> ac + (2) h + nadh (RXN66-3) (:METACYC (RIGHT REMOVE PROTON)) ALDD19x aldehyde dehydrogenase (phenylacetaldehyde, NAD) [c] : h2o + nad + pacald --> (2) h + nadh + pac (PHENDEHYD-RXN) ((RIGHT REMOVE PROTON)) ALCD2x alcohol dehydrogenase (ethanol) [c] : etoh + nad <==> acald + h + nadh (ALCOHOL-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) ALCD19 alcohol dehydrogenase (glycerol) [c] : glyald + h + nadh <==> glyc + nad ALAtex L-alanine transport via diffusion (extracellular to periplasm) ala-L[e] <==> ala-L[p] (:EXCHANGE) ALAt2rpp L-alanine reversible transport via proton symport (periplasm) ala-L[p] + h[p] <==> ala-L[c] + h[c] ALAabcpp L-alanine transport via ABC system (periplasm) ala-L[p] + atp[c] + h2o[c] --> adp[c] + ala-L[c] + h[c] + pi[c] ALATRS Alanyl-tRNA synthetase [c] : ala-L + atp + trnaala --> alatrna + amp + ppi (ALANINE--TRNA-LIGASE-RXN) ALATA_L2 alanine transaminase [c] : ala-L + pydx5p --> pyam5p + pyr ALATA_L L-alanine transaminase [c] : akg + ala-L <==> glu-L + pyr (ALANINE-AMINOTRANSFERASE-RXN) ALATA_D2 D-alanine transaminase [c] : ala-D + pydx5p --> pyam5p + pyr ALAR alanine racemase [c] : ala-L <==> ala-D (ALARACECAT-RXN) ALAGLUE L-alanyl-gamma-glutamate epimerase [c] : LalaDglu <==> LalaLglu (:UNMAPPED-CPDS) ALAALAtex D-alanyl-D-alanine (DalaDala) transport via diffusion (extracellular to periplasm) alaala[e] <==> alaala[p] (:EXCHANGE) ALAALAr D-alanine-D-alanine ligase (reversible) [c] : (2) ala-D + atp <==> adp + alaala + h + pi (DALADALALIG-RXN) ((RIGHT REMOVE PROTON)) ALAALAabcpp D-alanyl-D-alanine (DalaDala) transport via ABC system (periplasm) alaala[p] + atp[c] + h2o[c] --> adp[c] + alaala[c] + h[c] + pi[c] ALAALAD D-alanine-D-alanine dipeptidase [c] : alaala + h2o --> (2) ala-D (3.4.16.4-RXN) AKGtex alpha-ketoglutarate transport via diffusion (extracellular to periplasm) akg[e] <==> akg[p] (:EXCHANGE) AKGt2rpp 2-oxoglutarate reversible transport via symport (periplasm) akg[p] + h[p] <==> akg[c] + h[c] (TRANS-RXN-23) AKGDH 2-Oxogluterate dehydrogenase [c] : akg + coa + nad --> co2 + nadh + succoa (2OXOGLUTARATEDEH-RXN) AIRC3 phosphoribosylaminoimidazole carboxylase (mutase rxn) [c] : 5aizc <==> 5caiz (RXN0-743) AIRC2 phosphoribosylaminoimidazole carboxylase [c] : air + atp + hco3 --> 5caiz + adp + h + pi AICART phosphoribosylaminoimidazolecarboxamide formyltransferase [c] : 10fthf + aicar <==> fprica + thf (AICARTRANSFORM-RXN) AHCYSNS S-adenosylhomocysteine nucleosidase [c] : ahcys + h2o --> ade + rhcys (ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN) AHC adenosylhomocysteinase [c] : ahcys + h2o <==> adn + hcys-L (ADENOSYLHOMOCYSTEINASE-RXN) (:METACYC) AGt3 silver transport out via proton antiport ag[c] + h[e] --> ag[e] + h[c] AGPR N-acetyl-g-glutamyl-phosphate reductase [c] : acg5sa + nadp + pi <==> acg5p + h + nadph (N-ACETYLGLUTPREDUCT-RXN) ((RIGHT REMOVE PROTON)) AGPAT181 1-octadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C18:1) [c] : 1odec11eg3p + octeACP --> ACP + pa181 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) AGPAT180 1-octadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C18:0) [c] : 1odecg3p + ocdcaACP --> ACP + pa180 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) AGPAT161 1-hexadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:1) [c] : 1hdec9eg3p + hdeACP --> ACP + pa161 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) AGPAT160 1-hexadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:0) [c] : 1hdecg3p + palmACP --> ACP + pa160 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) AGPAT141 1-tetradec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C14:1) [c] : 1tdec7eg3p + tdeACP --> ACP + pa141 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) AGPAT140 1-tetradecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C14:0) [c] : 1tdecg3p + myrsACP --> ACP + pa140 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) AGPAT120 1-tetradecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C12:0) [c] : 1ddecg3p + ddcaACP --> ACP + pa120 (1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN) (:EXPANDED-RXN-MATCH) AGMtex agmatine transport via diffusion (extracellular to periplasm) agm[e] <==> agm[p] (:EXCHANGE) AGMt2pp GlcNAc-anhMurNAc transport in via proton symport (periplasm) anhgm[p] + h[p] --> anhgm[c] + h[c] (:UNMAPPED-CPDS) AGMT agmatinase [c] : agm + h2o --> ptrc + urea (AGMATIN-RXN) AGMHE ADP-D-glycero-D-manno-heptose epimerase [c] : adphep-DD --> adphep-LD (5.1.3.20-RXN) AGMH N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl beta -1,4-N-acetylglucosaminidase [c] : anhgm + h2o --> acgam + anhm (:UNMAPPED-CPDS) AGM4Pt2pp GlcNAc-anhMurNAc tetrapeptide transport in via proton symport (periplasm) anhgm4p[p] + h[p] --> anhgm4p[c] + h[c] (:UNMAPPED-CPDS) AGM4PH N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide beta -1,4-N-acetylglucosaminidase [c] : anhgm4p + h2o --> acgam + anhm4p (:UNMAPPED-CPDS) AGM4PCPpp N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase (periplasmic) [p] : anhgm4p + h2o --> ala-D + anhgm3p (:UNMAPPED-CPDS) AGM4PCP N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase [c] : anhgm4p + h2o --> ala-D + anhgm3p (:UNMAPPED-CPDS) AGM4PApp N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide amidase (periplasm) [p] : anhgm4p + h2o --> LalaDgluMdapDala + anhgm (:UNMAPPED-CPDS) AGM4PA N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide amidase [c] : anhgm4p + h2o --> LalaDgluMdapDala + anhgm (:UNMAPPED-CPDS) AGM3Pt2pp GlcNAc-anhMurNAc tripeptide transport in via proton symport (periplasm) anhgm3p[p] + h[p] --> anhgm3p[c] + h[c] (:UNMAPPED-CPDS) AGM3PH N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide beta -1,4-N-acetylglucosaminidase [c] : anhgm3p + h2o --> acgam + anhm3p (:UNMAPPED-CPDS) AGM3PApp N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase (periplasm) [p] : anhgm3p + h2o --> LalaDgluMdap + anhgm (:UNMAPPED-CPDS) AGM3PA N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase [c] : anhgm3p + h2o --> LalaDgluMdap + anhgm (:UNMAPPED-CPDS) AGDC N-acetylglucosamine-6-phosphate deacetylase [c] : acgam6p + h2o --> ac + gam6p (NAG6PDEACET-RXN) ADSS adenylosuccinate synthase [c] : asp-L + gtp + imp --> dcamp + gdp + (2) h + pi (ADENYLOSUCCINATE-SYNTHASE-RXN) ((RIGHT REMOVE PROTON)) ADSL2r adenylosuccinate lyase [c] : 25aics <==> aicar + fum (AICARSYN-RXN) ADSL1r adenylsuccinate lyase [c] : dcamp <==> amp + fum (AMPSYN-RXN) ADSK adenylyl-sulfate kinase [c] : aps + atp --> adp + h + paps (ADENYLYLSULFKIN-RXN) ((RIGHT REMOVE PROTON)) ADPT adenine phosphoribosyltransferase [c] : ade + prpp --> amp + ppi (ADENPRIBOSYLTRAN-RXN) ADPRDP ADPribose diphosphatase [c] : adprib + h2o --> amp + (2) h + r5p (RXN0-1441) ((RIGHT REMOVE PROTON)) ADOCBLtonex Adenosylcobalimin transport via ton system (extermal) adocbl[e] + h[p] --> adocbl[p] + h[c] ADOCBLabcpp Adenosylcobalamin transport via ABC system (periplasm) adocbl[p] + atp[c] + h2o[c] --> adocbl[c] + adp[c] + h[c] + pi[c] ADOCBLS Adenosylcobalamin 5'-phosphate synthase [c] : agdpcbi + rdmbzi --> adocbl + gmp + h (COBALAMINSYN-RXN) ((RIGHT REMOVE PROTON)) ADOCBIK Adenosyl cobinamide kinase [c] : adocbi + atp --> adocbip + adp + h (COBINAMIDEKIN-RXN) ((RIGHT REMOVE PROTON)) ADNtex adenosine transport via diffusion (extracellular to periplasm) adn[e] <==> adn[p] (:EXCHANGE) ADNt2rpp adenosine transport in via proton symport, reversible (periplasm) adn[p] + h[p] <==> adn[c] + h[c] (TRANS-RXN-108A) ADNt2pp adenosine transport in via proton symport (periplasm) adn[p] + h[p] --> adn[c] + h[c] (TRANS-RXN-108A) ADNUC adenosine hydrolase [c] : adn + h2o --> ade + rib-D (ADENOSINE-NUCLEOSIDASE-RXN) ADNK1 adenosine kinase [c] : adn + atp --> adp + amp + h (ADENOSINE-KINASE-RXN) (:METACYC (RIGHT REMOVE PROTON)) ADNCYC adenylate cyclase [c] : atp --> camp + ppi (ADENYLATECYC-RXN) ADMDCr Adenosylmethionine decarboxylase [c] : amet + h <==> ametam + co2 (SAMDECARB-RXN) ((LEFT REMOVE PROTON)) ADK4 adentylate kinase (ITP) [c] : amp + itp <==> adp + idp ADK3 adentylate kinase (GTP) [c] : amp + gtp <==> adp + gdp ADK1 adenylate kinase [c] : amp + atp <==> (2) adp (ADENYL-KIN-RXN) ADEtex adenine transport via diffusion (extracellular to periplasm) ade[e] <==> ade[p] (:EXCHANGE) ADEt2rpp adenine transport via proton symport (reversible) (periplasm) ade[p] + h[p] <==> ade[c] + h[c] ADD adenine deaminase [c] : ade + h + h2o --> hxan + nh4 (ADENINE-DEAMINASE-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ADCS 4-amino-4-deoxychorismate synthase [c] : chor + gln-L --> 4adcho + glu-L (PABASYN-RXN) ADCL 4-aminobenzoate synthase [c] : 4adcho --> 4abz + h + pyr (ADCLY-RXN) ((RIGHT REMOVE PROTON)) ADA Adenosine deaminase [c] : adn + h + h2o --> ins + nh4 (ADENODEAMIN-RXN) ((LEFT REMOVE PROTON) (RIGHT SUBSTITUTE AMMONIA AMMONIUM)) ACtex Acetate transport via diffusion (extracellular to periplasm) ac[e] <==> ac[p] (:EXCHANGE) ACt4pp Na+/Acetate symport (periplasm) ac[p] + na1[p] --> ac[c] + na1[c] ACt2rpp acetate reversible transport via proton symport (periplasm) ac[p] + h[p] <==> ac[c] + h[c] (RXN0-1981) ((LEFT REMOVE PROTON) (RIGHT REMOVE PROTON)) ACSERtpp O-Acetyl-L-serine export via facilitated transport acser[c] --> acser[p] (RXN0-1923) ACSERtex O-Acetyl-L-serine transport via diffusion (extracellular to periplasm) acser[e] <==> acser[p] (:EXCHANGE) ACS acetyl-CoA synthetase [c] : ac + atp + coa --> accoa + amp + ppi (ACETATE--COA-LIGASE-RXN) ACPS1 acyl-carrier protein synthase [c] : apoACP + coa --> ACP + h + pap (HOLO-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (RIGHT REMOVE PROTON)) ACOTA acetylornithine transaminase [c] : acorn + akg <==> acg5sa + glu-L (ACETYLORNTRANSAM-RXN) ACONTb aconitase (half-reaction B, Isocitrate hydro-lyase) [c] : acon-C + h2o <==> icit (ACONITATEHYDR-RXN) ACONTa aconitase (half-reaction A, Citrate hydro-lyase) [c] : cit <==> acon-C + h2o (ACONITATEDEHYDR-RXN) ACONMT Trans-aconitate methyltransferase [c] : acon-T + amet --> aconm + ahcys (RXN0-2441) ACONIs aconitate isomerase (spontaneous) [c] : acon-T <==> acon-C (RXN0-2442) ACOLIPAtex arabinose modified core oligosaccharide lipid A transport via vector (periplasm to extracellular) acolipa[p] --> acolipa[e] (:EXCHANGE) ACODA acetylornithine deacetylase [c] : acorn + h2o --> ac + orn (ACETYLORNDEACET-RXN) ACOATA Acetyl-CoA ACP transacylase [c] : ACP + accoa <==> acACP + coa (ACP-S-ACETYLTRANSFER-RXN) ACOAD8f acyl-CoA dehydrogenase (octadecanoyl-CoA) [c] : fad + stcoa --> fadh2 + od2coa ACOAD7f acyl-CoA dehydrogenase (hexadecanoyl-CoA) [c] : fad + pmtcoa --> fadh2 + hdd2coa ACOAD6f acyl-CoA dehydrogenase (tetradecanoyl-CoA) [c] : fad + tdcoa --> fadh2 + td2coa (ACYLCOADEHYDROG-RXN) (:METACYC :EXPANDED-RXN-MATCH) ACOAD5f acyl-CoA dehydrogenase (dodecanoyl-CoA) [c] : ddcacoa + fad --> dd2coa + fadh2 ACOAD4f acyl-CoA dehydrogenase (decanoyl-CoA) [c] : dcacoa + fad --> dc2coa + fadh2 (ACYLCOADEHYDROG-RXN) (:EXPANDED-RXN-MATCH) ACOAD3f acyl-CoA dehydrogenase (octanoyl-CoA) [c] : fad + occoa --> fadh2 + oc2coa ACOAD2f acyl-CoA dehydrogenase (hexanoyl-CoA) [c] : fad + hxcoa --> fadh2 + hx2coa ACOAD1f acyl-CoA dehydrogenase (butanoyl-CoA) [c] : btcoa + fad --> b2coa + fadh2 ACNML N-Acetylneuraminate lyase [c] : acnam --> acmana + pyr (ACNEULY-RXN) ACNAMtex N-acetylneuraminate transport via diffusion (extracellular to periplasm) acnam[e] <==> acnam[p] (:EXCHANGE) ACNAMt2pp N-acetylneuraminate proton symport (periplasm) acnam[p] + h[p] --> acnam[c] + h[c] (TRANS-RXN-25) ACMUMtex N-acetylmuramate transport via diffusion (extracellular to periplasm) acmum[e] --> acmum[p] (:EXCHANGE) ACMUMptspp N-acetylmuramate transport via PEP:Pyr PTS (periplasm) acmum[p] + pep[c] --> acmum6p[c] + pyr[c] ACMANAtex N-acetyl-D-mannosamine transport via diffusion (extracellular to periplasm) acmana[e] <==> acmana[p] (:EXCHANGE) ACMANAptspp N-acetyl-D-mannosamine transport via PTS (periplasm) acmana[p] + pep[c] --> acmanap[c] + pyr[c] ACMAMUT UDP-N-acetyl-D-mannosaminuronic acid transferase [c] : uacmamu + unaga --> h + udp + unagamu (UDPMANACATRANS-RXN) ((RIGHT REMOVE PROTON)) ACM6PH N-acetylmuramate 6-phosphate hydrolase [c] : acmum6p + h2o --> acgam6p + lac-D ACLS acetolactate synthase [c] : h + (2) pyr --> alac-S + co2 (ACETOLACTSYN-RXN) ((LEFT REMOVE PROTON)) ACKr acetate kinase [c] : ac + atp <==> actp + adp (ACETATEKIN-RXN) ACHBS 2-aceto-2-hydroxybutanoate synthase [c] : 2obut + h + pyr --> 2ahbut + co2 (ACETOOHBUTSYN-RXN) ((LEFT REMOVE PROTON)) ACGS N-acetylglutamate synthase [c] : accoa + glu-L --> acglu + coa + h (N-ACETYLTRANSFER-RXN) ((RIGHT REMOVE PROTON)) ACGK acetylglutamate kinase [c] : acglu + atp --> acg5p + adp (ACETYLGLUTKIN-RXN) ACGAtex N-Acetyl-D-glucosamine transport via diffusion (extracellular to periplasm) acgam[e] <==> acgam[p] (:EXCHANGE) ACGAptspp N-Acetyl-D-glucosamine transport via PEP:Pyr PTS (periplasm) acgam[p] + pep[c] --> acgam6p[c] + pyr[c] (TRANS-RXN-167) ACGAMT UDP-N-acetylglucosamine:undecaprenylphosphate N-acetylglucosamine -1-phosphate transferase [c] : uacgam + udcpp --> ump + unaga (GLCNACPTRANS-RXN) ACGAMK N-acetylglucosamine kinase [c] : acgam + atp --> acgam6p + adp + h (N-ACETYLGLUCOSAMINE-KINASE-RXN) ((RIGHT REMOVE PROTON)) ACGAM1Ptex N-acetyl-D-glucosamine 1-phosphate transport via diffusion (extracellular to periplasm) acgam1p[e] <==> acgam1p[p] (:EXCHANGE) ACGAM1PPpp N-acetyl-D-glucosamine 1-phosphatase (periplasm) [p] : acgam1p + h2o --> acgam + pi ACGALtex N-acetyl-D-galactosamine transport via diffusion (extracellular to periplasm) acgal[e] <==> acgal[p] (:EXCHANGE) ACGAL1Ptex N-acetyl-D-galactosamine 1-phosphate transport via diffusion (extracellular to periplasm) acgal1p[e] <==> acgal1p[p] (:EXCHANGE) ACGAL1PPpp N-acetyl-D-galactosamine 1-phosphatase (periplasm) [p] : acgal1p + h2o --> acgal + pi ACCOAL acetate-CoA ligase (ADP-forming) [c] : atp + coa + ppa --> adp + pi + ppcoa (PROPANOATECOA-LIGASE-RXN) (:METACYC) ACCOAC acetyl-CoA carboxylase [c] : accoa + atp + hco3 --> adp + h + malcoa + pi ACBIPGT Adenosyl cobinamide phosphate guanyltransferase [c] : adocbip + gtp + h --> agdpcbi + ppi (COBINPGUANYLYLTRANS-RXN) ((LEFT REMOVE PROTON)) ACANTHAT acetyl-CoA:anthranilate acetyltransferase [c] : accoa + anth --> acanth + coa ACALDtpp acetaldehyde reversible transport (periplasm) acald[p] <==> acald[c] (:EXCHANGE) ACALDtex acetaldehyde transport via diffusion (extracellular to periplasm) acald[e] <==> acald[p] (:EXCHANGE) ACALD acetaldehyde dehydrogenase (acetylating) [c] : acald + coa + nad <==> accoa + h + nadh (ACETALD-DEHYDROG-RXN) ((RIGHT REMOVE PROTON)) ACACtex acetoacetate transport via diffusion (extracellular to periplasm) acac[e] <==> acac[p] (:EXCHANGE) ACACt2pp acetoacetate transport via proton symport (periplasm) acac[p] + h[p] <==> acac[c] + h[c] ACACT1r acetyl-CoA C-acetyltransferase [c] : (2) accoa <==> aacoa + coa (ACETYL-COA-ACETYLTRANSFER-RXN) ACACCT acetyl-CoA:acetoacetyl-CoA transferase [c] : acac + accoa --> aacoa + ac (ACETOACETYL-COA-TRANSFER-RXN) ABUTtex 4-aminobutyrate transport via diffusion (extracellular to periplasm) 4abut[e] <==> 4abut[p] (:EXCHANGE) ABUTt2pp 4-aminobutyrate transport in via proton symport (periplasm) 4abut[p] + h[p] --> 4abut[c] + h[c] (TRANS-RXN-57) ABUTD Aminobutyraldehyde dehydrogenase [c] : 4abutn + h2o + nad --> 4abut + (2) h + nadh (AMINOBUTDEHYDROG-RXN) ((RIGHT REMOVE PROTON)) ABTA 4-aminobutyrate transaminase [c] : 4abut + akg --> glu-L + sucsal (GABATRANSAM-RXN) AB6PGH Arbutin 6-phosphate glucohydrolase [c] : arbt6p + h2o --> g6p + hqn AAMYLpp alpha-amylase (periplasm) [p] : 14glucan --> malthx AAMYL alpha-amylase [c] : 14glucan --> malthx AALDCDLs Aminoacetaldehyde: CO2 ligase (spontaneous reaction) [c] : aacald + co2 <==> 2amsa + h AADDGT dTDP-N-4-acetamido-4,6-dideoxy-D-galactose transferase [c] : dtdp4aaddg + unagamu --> dtdp + h + unagamuf (FUC4NACTRANS-RXN) ((RIGHT REMOVE PROTON)) AACTOOR Aminoacetone:oxygen oxidoreductase(deaminating)(flavin-containing) [c] : aact + h2o + o2 --> h2o2 + mthgxl + nh4 (AMACETOXID-RXN) ((RIGHT SUBSTITUTE AMMONIA AMMONIUM)) AACPS9 acyl-[acyl-carrier-protein] synthetase (n-C8:0) [c] : ACP + atp + octa --> amp + ocACP + ppi (RXN-5741) AACPS8 acyl-[acyl-carrier-protein] synthetase (n-C10:0) [c] : ACP + atp + dca --> amp + dcaACP + ppi AACPS7 acyl-[acyl-carrier-protein] synthetase (n-C12:0) [c] : ACP + atp + ddca --> amp + ddcaACP + ppi AACPS6 acyl-[acyl-carrier-protein] synthetase (n-C18:0) [c] : ACP + atp + ocdca --> amp + ocdcaACP + ppi AACPS5 acyl-[acyl-carrier-protein] synthetase (n-C18:1) [c] : ACP + atp + ocdcea --> amp + octeACP + ppi AACPS4 acyl-[acyl-carrier-protein] synthetase (n-C16:1) [c] : ACP + atp + hdcea --> amp + hdeACP + ppi AACPS3 acyl-[acyl-carrier-protein] synthetase (n-C16:0) [c] : ACP + atp + hdca --> amp + palmACP + ppi AACPS2 acyl-[acyl-carrier-protein] synthetase (n-C14:1) [c] : ACP + atp + ttdcea --> amp + ppi + tdeACP (:UNMAPPED-CPDS) AACPS1 acyl-[acyl-carrier-protein] synthetase (n-C14:0) [c] : ACP + atp + ttdca --> amp + myrsACP + ppi (:UNMAPPED-CPDS) A5PISO arabinose-5-phosphate isomerase [c] : ru5p-D <==> ara5p (DARAB5PISOM-RXN) 5DOAN 5'-deoxyadenosine nuclosidase [c] : dad-5 + h2o --> 5drib + ade (:UNMAPPED-CPDS) 5DGLCNR 5-dehydro-D-gluconate reductase [c] : 5dglcn + h + nadph <==> glcn + nadp (GLUCONATE-5-DEHYDROGENASE-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 4PEPTtex LalaDgluMdapDala (pentapeptide) transport via diffusion (extracellular to periplasm) LalaDgluMdapDala[e] <==> LalaDgluMdapDala[p] (:UNMAPPED-CPDS) 4PEPTabcpp tetrapeptide (LalaDgluMdapDala) transport via ABC system (periplasm) LalaDgluMdapDala[p] + atp[c] + h2o[c] --> LalaDgluMdapDala[c] + adp[c] + h[c] + pi[c] (:UNMAPPED-CPDS) 4PCPpp tetrapeptide L,D-carboxypeptidase (periplasm) [p] : LalaDgluMdapDala + h2o --> LalaDgluMdap + ala-D (:UNMAPPED-CPDS) 4PCP tetrapeptide L,D-carboxypeptidase [c] : LalaDgluMdapDala + h2o --> LalaDgluMdap + ala-D (:UNMAPPED-CPDS) 4HTHRS 4-Hydroxy-L-threonine synthase [c] : h2o + phthr --> 4hthr + pi (:UNMAPPED-CPDS) 4HOXPACDtex 4-hydroxyphenylacetaldehyde transport via diffusion (extracellular to periplasm) 4hoxpacd[e] <==> 4hoxpacd[p] (:EXCHANGE) 42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) [p] : dopa + h2o + o2 --> 34dhpac + h2o2 + nh4 3UMPtex 3UMP transport via diffusion (extracellular to periplasm) 3ump[e] <==> 3ump[p] (:EXCHANGE) 3PEPTtex LalaDgluMdap (tripeptide) transport via diffusion (extracellular to periplasm) LalaDgluMdap[e] <==> LalaDgluMdap[p] (:EXCHANGE) 3PEPTabcpp tripeptide (LalaDgluMdap) transport via ABC system (periplasm) LalaDgluMdap[p] + atp[c] + h2o[c] --> LalaDgluMdap[c] + adp[c] + h[c] + pi[c] 3OAS80 3-oxoacyl-[acyl-carrier-protein] synthase (n-C8:0) [c] : h + hexACP + malACP --> 3ooctACP + ACP + co2 (3-OXOACYL-ACP-SYNTH-RXN) ((LEFT REMOVE PROTON)) 3OAS60 3-oxoacyl-[acyl-carrier-protein] synthase (n-C6:0) [c] : butACP + h + malACP --> 3ohexACP + ACP + co2 (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAS181 3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:1) [c] : h + hdeACP + malACP --> 3ocvac11eACP + ACP + co2 (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAS180 3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:0) [c] : h + malACP + palmACP --> 3ooctdACP + ACP + co2 (3-OXOACYL-ACP-SYNTH-RXN) ((LEFT REMOVE PROTON)) 3OAS161 3-oxoacyl-[acyl-carrier-protein] synthase (n-C16:1) [c] : h + malACP + tdeACP --> 3ocpalm9eACP + ACP + co2 (3-OXOACYL-ACP-SYNTH-RXN) ((LEFT REMOVE PROTON)) 3OAS160 3-oxoacyl-[acyl-carrier-protein] synthase (n-C16:0) [c] : h + malACP + myrsACP --> 3opalmACP + ACP + co2 (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAS141 3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:1) [c] : cddec5eACP + h + malACP --> 3ocmrs7eACP + ACP + co2 3OAS140 3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:0) [c] : ddcaACP + h + malACP --> 3omrsACP + ACP + co2 (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAS121 3-oxoacyl-[acyl-carrier-protein] synthase (n-C12:1) [c] : cdec3eACP + h + malACP --> 3ocddec5eACP + ACP + co2 (RXN0-2141) ((LEFT REMOVE PROTON)) 3OAS120 3-oxoacyl-[acyl-carrier-protein] synthase (n-C12:0) [c] : dcaACP + h + malACP --> 3oddecACP + ACP + co2 (3-OXOACYL-ACP-SYNTH-RXN) ((LEFT REMOVE PROTON)) 3OAS100 3-oxoacyl-[acyl-carrier-protein] synthase (n-C10:0) [c] : h + malACP + ocACP --> 3odecACP + ACP + co2 (3-OXOACYL-ACP-SYNTH-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAR80 3-oxoacyl-[acyl-carrier-protein] reductase (n-C8:0) [c] : 3ooctACP + h + nadph <==> 3hoctACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR60 3-oxoacyl-[acyl-carrier-protein] reductase (n-C6:0) [c] : 3ohexACP + h + nadph <==> 3hhexACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR40 3-oxoacyl-[acyl-carrier-protein] reductase (n-C4:0) [c] : actACP + h + nadph <==> 3haACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAR181 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:1) [c] : 3ocvac11eACP + h + nadph --> 3hcvac11eACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR180 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0) [c] : 3ooctdACP + h + nadph <==> 3hoctaACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR161 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:1) [c] : 3ocpalm9eACP + h + nadph --> 3hcpalm9eACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR160 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:0) [c] : 3opalmACP + h + nadph <==> 3hpalmACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR141 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:1) [c] : 3ocmrs7eACP + h + nadph --> 3hcmrs7eACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR140 3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:0) [c] : 3omrsACP + h + nadph <==> 3hmrsACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3OAR121 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:1) [c] : 3ocddec5eACP + h + nadph --> 3hcddec5eACP + nadp (RXN0-2142) ((LEFT REMOVE PROTON)) 3OAR120 3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:0) [c] : 3oddecACP + h + nadph <==> 3hddecACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) ((LEFT REMOVE PROTON)) 3OAR100 3-oxoacyl-[acyl-carrier-protein] reductase (n-C10:0) [c] : 3odecACP + h + nadph <==> 3hdecACP + nadp (3-OXOACYL-ACP-REDUCT-RXN) (:EXPANDED-RXN-MATCH (LEFT REMOVE PROTON)) 3NTD9pp 3'-nucleotidase (GMP) (periplasm) [p] : 3gmp + h2o --> gsn + pi 3NTD7pp 3'-nucleotidase (AMP) (periplasm) [p] : 3amp + h2o --> adn + pi 3NTD4pp 3'-nucleotidase (CMP) (periplasm) [p] : 3cmp + h2o --> cytd + pi 3NTD2pp 3'-nucleotidase (UMP) (periplasm) [p] : 3ump + h2o --> pi + uri 3KGK 3-keto-L-gulonate kinase [c] : 3dhguln + atp --> 3dhgulnp + adp + h (RXN0-704) ((RIGHT REMOVE PROTON)) 3HPPPNH 3-(3-hydroxy-phenyl)propionate hydroxylase [c] : 3hpppn + h + nadh + o2 --> dhpppn + h2o + nad (MHPHYDROXY-RXN) ((LEFT REMOVE PROTON)) 3HCINNMH 3-hydroxycinnamate hydroxylase [c] : 3hcinnm + h + nadh + o2 --> dhcinnm + h2o + nad (:UNMAPPED-CPDS) 3HAD80 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C8:0) [c] : 3hoctACP --> h2o + toct2eACP (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD60 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C6:0) [c] : 3hhexACP --> h2o + thex2eACP (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD40 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C4:0) [c] : 3haACP --> but2eACP + h2o (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD181 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C18:1) [c] : 3hcvac11eACP --> h2o + t3c11vaceACP (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD180 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C18:0) [c] : 3hoctaACP --> h2o + toctd2eACP (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD161 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:1) [c] : 3hcpalm9eACP --> h2o + t3c9palmeACP (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD160 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:0) [c] : 3hpalmACP --> h2o + tpalm2eACP (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD141 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:1) [c] : 3hcmrs7eACP --> h2o + t3c7mrseACP (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD140 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:0) [c] : 3hmrsACP --> h2o + tmrs2eACP (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN) (:EXPANDED-RXN-MATCH) 3HAD121 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C12:1) [c] : 3hcddec5eACP --> h2o + t3c5ddeceACP (RXN0-2144) 3HAD120 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C12:0) [c] : 3hddecACP --> h2o + tddec2eACP (3-HYDROXYDECANOYL-ACP-DEHYDR-RXN FABAUNSATDEHYDR-RXN) 3HAD100 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C10:0) [c] : 3hdecACP --> h2o + tdec2eACP (FABAUNSATDEHYDR-RXN) 3GMPtex 3GMP transport via diffusion (extracellular to periplasm) 3gmp[e] <==> 3gmp[p] (:EXCHANGE) 3CMPtex 3CMP transport via diffusion (extracellular to periplasm) 3cmp[e] <==> 3cmp[p] (:EXCHANGE) 3AMPtex 3AMP transport via diffusion (extracellular to periplasm) 3amp[e] <==> 3amp[p] (:EXCHANGE) 34dhpactex dihydroxyphenylacetaldehyde transport via diffusion (extracellular to periplasm) 34dhpac[e] <==> 34dhpac[p] (:EXCHANGE) 2DGULRy 2-dehydro-L-gulonate reductase (NADPH) [c] : 2dhguln + h + nadph --> idon-L + nadp (YIAE2-RXN) ((LEFT REMOVE PROTON)) 2DGULRx 2-dehydro-L-gulonate reductase (NADH) [c] : 2dhguln + h + nadh --> idon-L + nad 2DGLCNRy 2-dehydro-D-gluconate reductase (NADPH) [c] : 2dhglcn + h + nadph --> glcn + nadp (1.1.1.215-RXN) ((LEFT REMOVE PROTON)) 2DGLCNRx 2-dehydro-D-gluconate reductase (NADH) [c] : 2dhglcn + h + nadh --> glcn + nad 2AGPGAT181 2-acyl-glycerophospho-glycerol acyltransferase (n-C18:1) [c] : 2agpg181 + atp + ocdcea --> amp + pg181 + ppi (:UNMAPPED-CPDS) 2AGPGAT180 2-acyl-glycerophospho-glycerol acyltransferase (n-C18:0) [c] : 2agpg180 + atp + ocdca --> amp + pg180 + ppi (:UNMAPPED-CPDS) 2AGPGAT161 2-acyl-glycerophospho-glycerol acyltransferase (n-C16:1) [c] : 2agpg161 + atp + hdcea --> amp + pg161 + ppi (:UNMAPPED-CPDS) 2AGPGAT160 2-acyl-glycerophospho-glycerol acyltransferase (n-C16:0) [c] : 2agpg160 + atp + hdca --> amp + pg160 + ppi (:UNMAPPED-CPDS) 2AGPGAT141 2-acyl-glycerophospho-glycerol acyltransferase (n-C14:1) [c] : 2agpg141 + atp + ttdcea --> amp + pg141 + ppi (:UNMAPPED-CPDS) 2AGPGAT140 2-acyl-glycerophospho-glycerol acyltransferase (n-C14:0) [c] : 2agpg140 + atp + ttdca --> amp + pg140 + ppi (:UNMAPPED-CPDS) 2AGPGAT120 2-acyl-glycerophospho-glycerol acyltransferase (n-C12:0) [c] : 2agpg120 + atp + ddca --> amp + pg120 + ppi (:UNMAPPED-CPDS) 2AGPG181tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:1) transporter via facilitated diffusion (periplasm) 2agpg181[p] --> 2agpg181[c] (:UNMAPPED-CPDS) 2AGPG180tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C18:0) transporter via facilitated diffusion (periplasm) 2agpg180[p] --> 2agpg180[c] (:UNMAPPED-CPDS) 2AGPG161tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:1) transporter via facilitated diffusion (periplasm) 2agpg161[p] --> 2agpg161[c] (:UNMAPPED-CPDS) 2AGPG160tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C16:0) transporter via facilitated diffusion (periplasm) 2agpg160[p] --> 2agpg160[c] (:UNMAPPED-CPDS) 2AGPG141tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:1) transporter via facilitated diffusion (periplasm) 2agpg141[p] --> 2agpg141[c] (:UNMAPPED-CPDS) 2AGPG140tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C14:0) transporter via facilitated diffusion (periplasm) 2agpg140[p] --> 2agpg140[c] (:UNMAPPED-CPDS) 2AGPG120tipp 2-Acyl-sn-glycero-3-phosphoglycerol (n-C12:0) transporter via facilitated diffusion (periplasm) 2agpg120[p] --> 2agpg120[c] (:UNMAPPED-CPDS) 2AGPEAT181 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:1) [c] : 2agpe181 + atp + ocdcea --> amp + pe181 + ppi (:UNMAPPED-CPDS) 2AGPEAT180 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C18:0) [c] : 2agpe180 + atp + ocdca --> amp + pe180 + ppi (:UNMAPPED-CPDS) 2AGPEAT161 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C16:1) [c] : 2agpe161 + atp + hdcea --> amp + pe161 + ppi (:UNMAPPED-CPDS) 2AGPEAT160 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C16:0) [c] : 2agpe160 + atp + hdca --> amp + pe160 + ppi (:UNMAPPED-CPDS) 2AGPEAT141 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:1) [c] : 2agpe141 + atp + ttdcea --> amp + pe141 + ppi (:UNMAPPED-CPDS) 2AGPEAT140 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C14:0) [c] : 2agpe140 + atp + ttdca --> amp + pe140 + ppi (:UNMAPPED-CPDS) 2AGPEAT120 2-acyl-glycerophospho-ethanolamine acyltransferase (n-C12:0) [c] : 2agpe120 + atp + ddca --> amp + pe120 + ppi (:UNMAPPED-CPDS) 2AGPE181tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:1) transporter via facilitated diffusion (periplasm) 2agpe181[p] --> 2agpe181[c] (:UNMAPPED-CPDS) 2AGPE180tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C18:0) transporter via facilitated diffusion (periplasm) 2agpe180[p] --> 2agpe180[c] (:UNMAPPED-CPDS) 2AGPE161tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:1) transporter via facilitated diffusion (periplasm) 2agpe161[p] --> 2agpe161[c] (:UNMAPPED-CPDS) 2AGPE160tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C16:0) transporter via facilitated diffusion (periplasm) 2agpe160[p] --> 2agpe160[c] (:UNMAPPED-CPDS) 2AGPE141tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:1) transporter via facilitated diffusion (periplasm) 2agpe141[p] --> 2agpe141[c] (:UNMAPPED-CPDS) 2AGPE140tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C14:0) transporter via facilitated diffusion (periplasm) 2agpe140[p] --> 2agpe140[c] (:UNMAPPED-CPDS) 2AGPE120tipp 2-Acyl-sn-glycero-3-phosphoethanolamine (n-C12:0) transporter via facilitated diffusion (periplasm) 2agpe120[p] --> 2agpe120[c] (:UNMAPPED-CPDS) 2AGPA181tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C18:1) transporter via facilitated diffusion (periplasm) 2odec11eg3p[p] --> 2odec11eg3p[c] (:UNMAPPED-CPDS) 2AGPA180tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C18:0) transporter via facilitated diffusion (periplasm) 2odecg3p[p] --> 2odecg3p[c] (:UNMAPPED-CPDS) 2AGPA161tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C16:1) transporter via facilitated diffusion (periplasm) 2hdec9eg3p[p] --> 2hdec9eg3p[c] (:UNMAPPED-CPDS) 2AGPA160tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C16:0) transporter via facilitated diffusion (periplasm) 2hdecg3p[p] --> 2hdecg3p[c] (:UNMAPPED-CPDS) 2AGPA141tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C14:1) transporter via facilitated diffusion (periplasm) 2tdec7eg3p[p] --> 2tdec7eg3p[c] (:UNMAPPED-CPDS) 2AGPA140tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C14:0) transporter via facilitated diffusion (periplasm) 2tdecg3p[p] --> 2tdecg3p[c] (:UNMAPPED-CPDS) 2AGPA120tipp 2-Acyl-sn-glycero-3-phosphatidate (n-C12:0) transporter via facilitated diffusion (periplasm) 2ddecg3p[p] --> 2ddecg3p[c] (:UNMAPPED-CPDS) 26DAHtex meso-2,6-Diaminoheptanedioate transport via diffusion (extracellular to periplasm) 26dap-M[e] <==> 26dap-M[p] (:EXCHANGE) 23PDE9pp 2',3'-cyclic-nucleotide phosphodiesterase (GMP) (periplasm) [p] : 23cgmp + h2o --> 3gmp + h 23PDE7pp 2',3'-cyclic-nucleotide phosphodiesterase (AMP) (periplasm) [p] : 23camp + h2o --> 3amp + h 23PDE4pp 2',3'-cyclic-nucleotide phosphodiesterase (CMP) (periplasm) [p] : 23ccmp + h2o --> 3cmp + h 23PDE2pp 2',3'-cyclic-nucleotide phosphodiesterase (UMP) (periplasm) [p] : 23cump + h2o --> 3ump + h 23DAPPAtex 2,3-diaminopropionate transport via diffusion 23dappa[e] <==> 23dappa[p] (:EXCHANGE) 23DAPPAt2rpp 2,3-diaminopropionate proton-linked transporter 23dappa[p] + h[p] <==> 23dappa[c] + h[c] 23CUMPtex 23cUMP transport via diffusion (extracellular to periplasm) 23cump[e] <==> 23cump[p] (:EXCHANGE) 23CGMPtex 23cGMP transport via diffusion (extracellular to periplasm) 23cgmp[e] <==> 23cgmp[p] (:EXCHANGE) 23CCMPtex 23cCMP transport via diffusion (extracellular to periplasm) 23ccmp[e] <==> 23ccmp[p] (:EXCHANGE) 23CAMPtex 23cAMP transport via diffusion (extracellular to periplasm) 23camp[e] <==> 23camp[p] (:EXCHANGE) 14GLUCANtexi 1,4-alpha-D-glucan transport via diffusion (extracellular to periplasm) irreversible 14glucan[e] --> 14glucan[p] (RXN0-1683) 14GLUCANabcpp 1,4-alpha-D-glucan transport via ABC system (periplasm) 14glucan[p] + atp[c] + h2o[c] --> 14glucan[c] + adp[c] + h[c] + pi[c] 12PPDStpp (S)-Propane-1,2-diol facilitated transport (periplasm) 12ppd-S[p] <==> 12ppd-S[c] (:EXCHANGE) 12PPDStex (S)-Propane-1,2-diol transport via diffusion (extracellular to periplasm) 12ppd-S[e] <==> 12ppd-S[p] (:EXCHANGE) 12PPDRtpp (R)-Propane-1,2-diol facilitated transport (periplasm) 12ppd-R[p] <==> 12ppd-R[c] (:UNMAPPED-CPDS) 12PPDRtex (R)-Propane-1,2-diol transport via diffusion (extracellular to periplasm) 12ppd-R[e] <==> 12ppd-R[p] (:UNMAPPED-CPDS) 12DGR181tipp 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C18:1) 12dgr181[p] --> 12dgr181[c] (:EXCHANGE) 12DGR180tipp 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C18:0) 12dgr180[p] --> 12dgr180[c] (:EXCHANGE) 12DGR161tipp 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C16:1) 12dgr161[p] --> 12dgr161[c] (:EXCHANGE) 12DGR160tipp 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C16:0) 12dgr160[p] --> 12dgr160[c] (:EXCHANGE) 12DGR141tipp 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C14:1) 12dgr141[p] --> 12dgr141[c] (:EXCHANGE) 12DGR140tipp 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C14:0) 12dgr140[p] --> 12dgr140[c] (:EXCHANGE) 12DGR120tipp 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, n-C12:0) 12dgr120[p] --> 12dgr120[c] (:EXCHANGE)